data_2ZZ9 # _model_server_result.job_id YjriiLPRpUD4iH9_AAOIbg _model_server_result.datetime_utc '2025-02-26 07:46:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zz9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 2ZZ9 # _exptl.entry_id 2ZZ9 _exptl.method 'ELECTRON CRYSTALLOGRAPHY' # _entity.details ? _entity.formula_weight 744.034 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZZ9 _cell.length_a 69 _cell.length_b 69 _cell.length_c 160 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZZ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 69 0 3 'crystal symmetry operation' 3_555 -y+1/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 34.5 34.5 0 4 'crystal symmetry operation' 4_455 y-1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 -34.5 34.5 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C41 H78 N O8 P' _chem_comp.formula_weight 744.034 _chem_comp.id PEE _chem_comp.mon_nstd_flag n _chem_comp.name 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DOPE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C5 PEE sing 237 n n C5 C4 PEE sing 238 n n C4 O4P PEE sing 239 n n O4P P PEE sing 240 n n O1P P PEE doub 241 n n C1 O3P PEE sing 242 n n C1 C2 PEE sing 243 n n O3P P PEE sing 244 n n P O2P PEE sing 245 n n C2 C3 PEE sing 246 n n C2 O2 PEE sing 247 n n C3 O3 PEE sing 248 n n O2 C10 PEE sing 249 n n C31 C30 PEE sing 250 n n C31 C32 PEE sing 251 n n C33 C32 PEE sing 252 n n C33 C34 PEE sing 253 n n C30 O3 PEE sing 254 n n C30 O5 PEE doub 255 n n C10 O4 PEE doub 256 n n C10 C11 PEE sing 257 n n C34 C35 PEE sing 258 n n C11 C12 PEE sing 259 n n C35 C36 PEE sing 260 n n C36 C37 PEE sing 261 n n C37 C38 PEE sing 262 n n C38 C39 PEE doub 263 z n C12 C13 PEE sing 264 n n C39 C40 PEE sing 265 n n C13 C14 PEE sing 266 n n C14 C15 PEE sing 267 n n C40 C41 PEE sing 268 n n C15 C16 PEE sing 269 n n C41 C42 PEE sing 270 n n C16 C17 PEE sing 271 n n C42 C43 PEE sing 272 n n C17 C18 PEE sing 273 n n C43 C44 PEE sing 274 n n C18 C19 PEE doub 275 z n C46 C47 PEE sing 276 n n C46 C45 PEE sing 277 n n C44 C45 PEE sing 278 n n C19 C20 PEE sing 279 n n C20 C21 PEE sing 280 n n C21 C22 PEE sing 281 n n C22 C23 PEE sing 282 n n C23 C24 PEE sing 283 n n C24 C25 PEE sing 284 n n C26 C25 PEE sing 285 n n C26 C27 PEE sing 286 n n C27 H7 PEE sing 287 n n C27 H8 PEE sing 288 n n C27 H82 PEE sing 289 n n C26 H5 PEE sing 290 n n C26 H6 PEE sing 291 n n C25 H12 PEE sing 292 n n C25 H4 PEE sing 293 n n C24 H10 PEE sing 294 n n C24 H11 PEE sing 295 n n C23 H83 PEE sing 296 n n C23 H9 PEE sing 297 n n C22 H2 PEE sing 298 n n C22 H3 PEE sing 299 n n C21 H14 PEE sing 300 n n C21 H1 PEE sing 301 n n C20 H16 PEE sing 302 n n C20 H13 PEE sing 303 n n C19 H18 PEE sing 304 n n C18 H20 PEE sing 305 n n C17 H22 PEE sing 306 n n C17 H19 PEE sing 307 n n C16 H21 PEE sing 308 n n C16 H28 PEE sing 309 n n C15 H23 PEE sing 310 n n C15 H24 PEE sing 311 n n C14 H25 PEE sing 312 n n C14 H26 PEE sing 313 n n C13 H17 PEE sing 314 n n C13 H27 PEE sing 315 n n C12 H15 PEE sing 316 n n C12 H29 PEE sing 317 n n C11 H30 PEE sing 318 n n C11 H31 PEE sing 319 n n C2 H32 PEE sing 320 n n C1 H33 PEE sing 321 n n C1 H34 PEE sing 322 n n O2P H35 PEE sing 323 n n C4 H36 PEE sing 324 n n C4 H37 PEE sing 325 n n C5 H38 PEE sing 326 n n C5 H39 PEE sing 327 n n N H40 PEE sing 328 n n N H41 PEE sing 329 n n C3 H43 PEE sing 330 n n C3 H44 PEE sing 331 n n C31 H45 PEE sing 332 n n C31 H46 PEE sing 333 n n C32 H47 PEE sing 334 n n C32 H48 PEE sing 335 n n C33 H49 PEE sing 336 n n C33 H50 PEE sing 337 n n C34 H51 PEE sing 338 n n C34 H52 PEE sing 339 n n C35 H53 PEE sing 340 n n C35 H54 PEE sing 341 n n C36 H55 PEE sing 342 n n C36 H56 PEE sing 343 n n C37 H57 PEE sing 344 n n C37 H58 PEE sing 345 n n C38 H59 PEE sing 346 n n C39 H60 PEE sing 347 n n C40 H81 PEE sing 348 n n C40 H61 PEE sing 349 n n C41 H80 PEE sing 350 n n C41 H62 PEE sing 351 n n C42 H63 PEE sing 352 n n C42 H64 PEE sing 353 n n C43 H65 PEE sing 354 n n C43 H66 PEE sing 355 n n C44 H67 PEE sing 356 n n C44 H68 PEE sing 357 n n C45 H69 PEE sing 358 n n C45 H70 PEE sing 359 n n C46 H71 PEE sing 360 n n C46 H72 PEE sing 361 n n C47 H73 PEE sing 362 n n C47 H74 PEE sing 363 n n C47 H75 PEE sing 364 n n # _atom_sites.entry_id 2ZZ9 _atom_sites.fract_transf_matrix[1][1] 0.014493 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014493 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00625 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PEE A 1 401 401 PEE PEE . C 2 PEE A 1 402 402 PEE PEE . D 2 PEE A 1 403 403 PEE PEE . E 2 PEE A 1 404 404 PEE PEE . F 2 PEE A 1 405 405 PEE PEE . G 3 HOH A 1 545 545 HOH HOH . G 3 HOH A 2 546 546 HOH HOH . G 3 HOH A 3 547 547 HOH HOH . G 3 HOH A 4 548 548 HOH HOH . G 3 HOH A 5 549 549 HOH HOH . G 3 HOH A 6 550 550 HOH HOH . G 3 HOH A 7 551 551 HOH HOH . G 3 HOH A 8 552 552 HOH HOH . G 3 HOH A 9 553 553 HOH HOH . G 3 HOH A 10 554 554 HOH HOH . G 3 HOH A 11 555 555 HOH HOH . G 3 HOH A 12 556 556 HOH HOH . G 3 HOH A 13 557 557 HOH HOH . G 3 HOH A 14 558 558 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C26 PEE . . . C 2 31.811 47.561 134.625 1 85.4 ? C26 PEE 402 A 1 HETATM 2 C C25 PEE . . . C 2 32.166 46.128 134.276 1 85.37 ? C25 PEE 402 A 1 HETATM 3 C C24 PEE . . . C 2 31.945 45.162 135.445 1 85.44 ? C24 PEE 402 A 1 HETATM 4 C C23 PEE . . . C 2 33.153 44.256 135.726 1 84.84 ? C23 PEE 402 A 1 HETATM 5 C C22 PEE . . . C 2 33.207 43.841 137.185 1 84.08 ? C22 PEE 402 A 1 HETATM 6 C C21 PEE . . . C 2 33.369 44.765 138.136 1 83.14 ? C21 PEE 402 A 1 HETATM 7 C C20 PEE . . . C 2 33.427 44.402 139.601 1 81.95 ? C20 PEE 402 A 1 HETATM 8 C C19 PEE . . . C 2 33.904 45.625 140.376 1 81.36 ? C19 PEE 402 A 1 HETATM 9 C C18 PEE . . . C 2 33.385 45.633 141.811 1 80.72 ? C18 PEE 402 A 1 HETATM 10 C C17 PEE . . . C 2 32.408 46.79 142.061 1 79.96 ? C17 PEE 402 A 1 HETATM 11 C C16 PEE . . . C 2 32.525 47.405 143.46 1 78.93 ? C16 PEE 402 A 1 HETATM 12 C C15 PEE . . . C 2 32.187 46.417 144.574 1 77.87 ? C15 PEE 402 A 1 HETATM 13 C C14 PEE . . . C 2 33.36 46.134 145.504 1 77.14 ? C14 PEE 402 A 1 HETATM 14 C C13 PEE . . . C 2 33.071 46.751 146.865 1 77.09 ? C13 PEE 402 A 1 HETATM 15 C C12 PEE . . . C 2 33.903 46.105 147.96 1 77.38 ? C12 PEE 402 A 1 HETATM 16 C C11 PEE . . . C 2 33.038 45.28 148.9 1 77.67 ? C11 PEE 402 A 1 HETATM 17 C C10 PEE . . . C 2 33.499 43.434 150.339 1 79.56 ? C10 PEE 402 A 1 HETATM 18 O O4 PEE . . . C 2 33.621 43.983 149.024 1 78.68 ? O4 PEE 402 A 1 HETATM 19 O O2 PEE . . . C 2 34.649 43.769 151.121 1 80.15 ? O2 PEE 402 A 1 HETATM 20 C C2 PEE . . . C 2 35.229 42.646 151.789 1 80.6 ? C2 PEE 402 A 1 HETATM 21 C C1 PEE . . . C 2 35.227 42.887 153.301 1 83.26 ? C1 PEE 402 A 1 HETATM 22 O O3P PEE . . . C 2 33.885 42.888 153.814 1 85.88 ? O3P PEE 402 A 1 HETATM 23 P P PEE . . . C 2 33.107 41.541 154.275 1 87.55 ? P PEE 402 A 1 HETATM 24 O O2P PEE . . . C 2 34.12 40.448 154.566 1 87.54 ? O2P PEE 402 A 1 HETATM 25 O O1P PEE . . . C 2 32.02 41.295 153.248 1 87.33 ? O1P PEE 402 A 1 HETATM 26 O O4P PEE . . . C 2 32.402 41.935 155.684 1 87.69 ? O4P PEE 402 A 1 HETATM 27 C C4 PEE . . . C 2 32.996 42.811 156.651 1 87.63 ? C4 PEE 402 A 1 HETATM 28 C C5 PEE . . . C 2 33.842 42.028 157.653 1 87.55 ? C5 PEE 402 A 1 HETATM 29 N N PEE . . . C 2 34.828 42.914 158.245 1 87.45 ? N PEE 402 A 1 HETATM 30 C C3 PEE . . . C 2 36.671 42.398 151.337 1 78.09 ? C3 PEE 402 A 1 HETATM 31 O O3 PEE . . . C 2 36.972 42.991 150.072 1 74.78 ? O3 PEE 402 A 1 HETATM 32 C C30 PEE . . . C 2 36.952 42.216 148.841 1 72.13 ? C30 PEE 402 A 1 HETATM 33 O O5 PEE . . . C 2 36.988 40.995 148.9 1 71.88 ? O5 PEE 402 A 1 HETATM 34 C C31 PEE . . . C 2 36.876 42.938 147.514 1 69.6 ? C31 PEE 402 A 1 HETATM 35 C C32 PEE . . . C 2 37.852 42.36 146.494 1 66.66 ? C32 PEE 402 A 1 HETATM 36 C C33 PEE . . . C 2 37.169 41.263 145.685 1 64.21 ? C33 PEE 402 A 1 HETATM 37 C C34 PEE . . . C 2 36.893 41.705 144.257 1 62.78 ? C34 PEE 402 A 1 HETATM 38 C C35 PEE . . . C 2 37.492 40.71 143.272 1 61.68 ? C35 PEE 402 A 1 HETATM 39 C C36 PEE . . . C 2 36.693 40.67 141.983 1 60.88 ? C36 PEE 402 A 1 HETATM 40 C C37 PEE . . . C 2 36.753 42.004 141.253 1 61.37 ? C37 PEE 402 A 1 HETATM 41 C C38 PEE . . . C 2 37.317 41.863 139.842 1 62.93 ? C38 PEE 402 A 1 HETATM 42 C C39 PEE . . . C 2 36.692 40.732 139.021 1 64.18 ? C39 PEE 402 A 1 HETATM 43 C C40 PEE . . . C 2 35.763 41.216 137.902 1 64.76 ? C40 PEE 402 A 1 HETATM 44 C C41 PEE . . . C 2 34.514 40.348 137.88 1 64.86 ? C41 PEE 402 A 1 HETATM 45 C C42 PEE . . . C 2 33.985 39.754 136.804 1 64 ? C42 PEE 402 A 1 HETATM 46 C C43 PEE . . . C 2 34.566 39.863 135.412 1 63.31 ? C43 PEE 402 A 1 HETATM 47 C C44 PEE . . . C 2 35.012 38.486 134.942 1 63.11 ? C44 PEE 402 A 1 HETATM 48 C C45 PEE . . . C 2 33.861 37.485 134.889 1 63.01 ? C45 PEE 402 A 1 HETATM 49 C C46 PEE . . . C 2 34.178 36.305 133.996 1 62.81 ? C46 PEE 402 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 49 #