data_2ZZB # _model_server_result.job_id ETrmMmcCUOBOL4M57NMVqg _model_server_result.datetime_utc '2025-02-27 23:09:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zzb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":500}' # _entry.id 2ZZB # _exptl.entry_id 2ZZB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZZB _cell.length_a 120.947 _cell.length_b 135.165 _cell.length_c 346.037 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZZB _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,O,P 1 1 C,D,J,K,L,M,N,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 J N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 73 A CYS 59 1_555 A SG CYS 78 A CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf2 A SG CYS 472 A CYS 458 1_555 B SG CYS 472 B CYS 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf3 B SG CYS 73 B CYS 59 1_555 B SG CYS 78 B CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf4 C SG CYS 73 C CYS 59 1_555 C SG CYS 78 C CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf5 C SG CYS 472 C CYS 458 1_555 D SG CYS 472 D CYS 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf6 D SG CYS 73 D CYS 59 1_555 D SG CYS 78 D CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2ZZB _atom_sites.fract_transf_matrix[1][1] 0.008268 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007398 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00289 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 500 500 FAD FAD . F 3 SO4 A 1 502 502 SO4 SO4 . G 2 FAD B 1 500 500 FAD FAD . H 4 TPT B 1 501 501 TPT TPT . I 3 SO4 B 1 502 502 SO4 SO4 . J 2 FAD C 1 500 500 FAD FAD . K 3 SO4 C 1 502 502 SO4 SO4 . L 2 FAD D 1 500 500 FAD FAD . M 4 TPT D 1 501 501 TPT TPT . N 3 SO4 D 1 502 502 SO4 SO4 . O 5 HOH A 1 501 3 HOH HOH . O 5 HOH A 2 503 5 HOH HOH . O 5 HOH A 3 504 6 HOH HOH . O 5 HOH A 4 505 8 HOH HOH . O 5 HOH A 5 506 11 HOH HOH . O 5 HOH A 6 507 13 HOH HOH . O 5 HOH A 7 508 14 HOH HOH . O 5 HOH A 8 509 16 HOH HOH . O 5 HOH A 9 510 17 HOH HOH . O 5 HOH A 10 511 18 HOH HOH . O 5 HOH A 11 512 19 HOH HOH . O 5 HOH A 12 513 20 HOH HOH . O 5 HOH A 13 514 21 HOH HOH . O 5 HOH A 14 515 22 HOH HOH . O 5 HOH A 15 516 23 HOH HOH . O 5 HOH A 16 517 24 HOH HOH . O 5 HOH A 17 518 25 HOH HOH . O 5 HOH A 18 519 26 HOH HOH . O 5 HOH A 19 520 41 HOH HOH . P 5 HOH B 1 503 1 HOH HOH . P 5 HOH B 2 504 2 HOH HOH . P 5 HOH B 3 505 9 HOH HOH . P 5 HOH B 4 506 10 HOH HOH . P 5 HOH B 5 507 12 HOH HOH . P 5 HOH B 6 508 27 HOH HOH . P 5 HOH B 7 509 28 HOH HOH . P 5 HOH B 8 510 29 HOH HOH . P 5 HOH B 9 511 30 HOH HOH . P 5 HOH B 10 512 31 HOH HOH . P 5 HOH B 11 513 32 HOH HOH . P 5 HOH B 12 514 33 HOH HOH . P 5 HOH B 13 515 34 HOH HOH . P 5 HOH B 14 516 35 HOH HOH . P 5 HOH B 15 517 36 HOH HOH . P 5 HOH B 16 518 53 HOH HOH . P 5 HOH B 17 519 54 HOH HOH . Q 5 HOH C 1 501 4 HOH HOH . Q 5 HOH C 2 503 7 HOH HOH . Q 5 HOH C 3 504 15 HOH HOH . Q 5 HOH C 4 505 37 HOH HOH . Q 5 HOH C 5 506 42 HOH HOH . Q 5 HOH C 6 507 43 HOH HOH . Q 5 HOH C 7 508 44 HOH HOH . Q 5 HOH C 8 509 45 HOH HOH . Q 5 HOH C 9 510 46 HOH HOH . Q 5 HOH C 10 511 47 HOH HOH . Q 5 HOH C 11 512 48 HOH HOH . Q 5 HOH C 12 513 49 HOH HOH . Q 5 HOH C 13 514 55 HOH HOH . R 5 HOH D 1 503 38 HOH HOH . R 5 HOH D 2 504 39 HOH HOH . R 5 HOH D 3 505 40 HOH HOH . R 5 HOH D 4 506 50 HOH HOH . R 5 HOH D 5 507 51 HOH HOH . R 5 HOH D 6 508 52 HOH HOH . R 5 HOH D 7 509 56 HOH HOH . R 5 HOH D 8 510 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . E 2 -49.326 20.973 -42.61 1 52.96 ? PA FAD 500 A 1 HETATM 2 O O1A FAD . . . E 2 -47.948 20.546 -42.317 1 51.5 ? O1A FAD 500 A 1 HETATM 3 O O2A FAD . . . E 2 -49.737 22.058 -41.497 1 53.83 ? O2A FAD 500 A 1 HETATM 4 O O5B FAD . . . E 2 -49.323 21.665 -44.083 1 56.29 ? O5B FAD 500 A 1 HETATM 5 C C5B FAD . . . E 2 -50.389 22.636 -44.158 1 61.25 ? C5B FAD 500 A 1 HETATM 6 C C4B FAD . . . E 2 -49.981 23.895 -44.948 1 64.33 ? C4B FAD 500 A 1 HETATM 7 O O4B FAD . . . E 2 -51.031 24.153 -45.895 1 65.54 ? O4B FAD 500 A 1 HETATM 8 C C3B FAD . . . E 2 -49.894 25.094 -43.988 1 65.84 ? C3B FAD 500 A 1 HETATM 9 O O3B FAD . . . E 2 -48.606 25.736 -44.081 1 66.09 ? O3B FAD 500 A 1 HETATM 10 C C2B FAD . . . E 2 -51.032 26.019 -44.443 1 67.51 ? C2B FAD 500 A 1 HETATM 11 O O2B FAD . . . E 2 -50.733 27.421 -44.323 1 68.52 ? O2B FAD 500 A 1 HETATM 12 C C1B FAD . . . E 2 -51.285 25.577 -45.894 1 68.11 ? C1B FAD 500 A 1 HETATM 13 N N9A FAD . . . E 2 -52.678 25.836 -46.286 1 69.63 ? N9A FAD 500 A 1 HETATM 14 C C8A FAD . . . E 2 -53.821 25.59 -45.552 1 69.49 ? C8A FAD 500 A 1 HETATM 15 N N7A FAD . . . E 2 -54.867 25.936 -46.224 1 69.49 ? N7A FAD 500 A 1 HETATM 16 C C5A FAD . . . E 2 -54.475 26.42 -47.418 1 69.87 ? C5A FAD 500 A 1 HETATM 17 C C6A FAD . . . E 2 -55.133 26.921 -48.527 1 69.38 ? C6A FAD 500 A 1 HETATM 18 N N6A FAD . . . E 2 -56.502 26.983 -48.53 1 69.69 ? N6A FAD 500 A 1 HETATM 19 N N1A FAD . . . E 2 -54.402 27.333 -49.583 1 70.09 ? N1A FAD 500 A 1 HETATM 20 C C2A FAD . . . E 2 -53.063 27.28 -49.604 1 69.44 ? C2A FAD 500 A 1 HETATM 21 N N3A FAD . . . E 2 -52.396 26.808 -48.578 1 69.56 ? N3A FAD 500 A 1 HETATM 22 C C4A FAD . . . E 2 -53.06 26.371 -47.474 1 70.07 ? C4A FAD 500 A 1 HETATM 23 N N1 FAD . . . E 2 -45.744 15.558 -35.628 1 56.99 ? N1 FAD 500 A 1 HETATM 24 C C2 FAD . . . E 2 -44.729 14.693 -35.451 1 57.24 ? C2 FAD 500 A 1 HETATM 25 O O2 FAD . . . E 2 -44.695 13.673 -36.141 1 57.94 ? O2 FAD 500 A 1 HETATM 26 N N3 FAD . . . E 2 -43.744 14.899 -34.542 1 57.25 ? N3 FAD 500 A 1 HETATM 27 C C4 FAD . . . E 2 -43.724 16.002 -33.745 1 56.25 ? C4 FAD 500 A 1 HETATM 28 O O4 FAD . . . E 2 -42.868 16.184 -32.957 1 56.76 ? O4 FAD 500 A 1 HETATM 29 C C4X FAD . . . E 2 -44.793 16.975 -33.881 1 56.56 ? C4X FAD 500 A 1 HETATM 30 N N5 FAD . . . E 2 -44.833 18.055 -33.142 1 56.72 ? N5 FAD 500 A 1 HETATM 31 C C5X FAD . . . E 2 -45.806 18.954 -33.254 1 55.25 ? C5X FAD 500 A 1 HETATM 32 C C6 FAD . . . E 2 -45.779 20.095 -32.415 1 55.7 ? C6 FAD 500 A 1 HETATM 33 C C7 FAD . . . E 2 -46.781 21.054 -32.516 1 55.94 ? C7 FAD 500 A 1 HETATM 34 C C7M FAD . . . E 2 -46.722 22.267 -31.615 1 55.47 ? C7M FAD 500 A 1 HETATM 35 C C8 FAD . . . E 2 -47.836 20.902 -33.453 1 55.02 ? C8 FAD 500 A 1 HETATM 36 C C8M FAD . . . E 2 -48.894 21.936 -33.559 1 56.96 ? C8M FAD 500 A 1 HETATM 37 C C9 FAD . . . E 2 -47.893 19.788 -34.292 1 54.95 ? C9 FAD 500 A 1 HETATM 38 C C9A FAD . . . E 2 -46.875 18.781 -34.216 1 54.23 ? C9A FAD 500 A 1 HETATM 39 N N10 FAD . . . E 2 -46.882 17.625 -35.049 1 52.87 ? N10 FAD 500 A 1 HETATM 40 C C10 FAD . . . E 2 -45.847 16.698 -34.9 1 55.44 ? C10 FAD 500 A 1 HETATM 41 C C1' FAD . . . E 2 -47.948 17.392 -36.054 1 48.95 ? C1' FAD 500 A 1 HETATM 42 C C2' FAD . . . E 2 -47.455 17.767 -37.473 1 45.64 ? C2' FAD 500 A 1 HETATM 43 O O2' FAD . . . E 2 -46.983 19.127 -37.498 1 43.55 ? O2' FAD 500 A 1 HETATM 44 C C3' FAD . . . E 2 -48.6 17.564 -38.486 1 43.68 ? C3' FAD 500 A 1 HETATM 45 O O3' FAD . . . E 2 -49.118 16.252 -38.371 1 42.89 ? O3' FAD 500 A 1 HETATM 46 C C4' FAD . . . E 2 -48.112 17.757 -39.907 1 43.98 ? C4' FAD 500 A 1 HETATM 47 O O4' FAD . . . E 2 -47.438 19.014 -40.02 1 44.74 ? O4' FAD 500 A 1 HETATM 48 C C5' FAD . . . E 2 -49.303 17.694 -40.884 1 44.59 ? C5' FAD 500 A 1 HETATM 49 O O5' FAD . . . E 2 -48.841 17.697 -42.248 1 46.2 ? O5' FAD 500 A 1 HETATM 50 P P FAD . . . E 2 -49.961 18.378 -43.161 1 46.27 ? P FAD 500 A 1 HETATM 51 O O1P FAD . . . E 2 -49.4 18.616 -44.517 1 45.48 ? O1P FAD 500 A 1 HETATM 52 O O2P FAD . . . E 2 -51.216 17.357 -43.229 1 44.21 ? O2P FAD 500 A 1 HETATM 53 O O3P FAD . . . E 2 -50.441 19.776 -42.499 1 49.02 ? O3P FAD 500 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #