data_3A05
#
_model_server_result.job_id            8iOCt6_jBN0xpMacpjlgNw 
_model_server_result.datetime_utc      '2024-11-21 22:28:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3a05 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":374}' 
#
_entry.id    3A05 
#
_exptl.entry_id    3A05 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              112.411 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CADMIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3A05 
_cell.length_a            98.212 
_cell.length_b            102.919 
_cell.length_c            97.645 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3A05 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_454 -x-1,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 -98.212 0 -48.8225 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 112 A GLU 112 1_555 F CD CD . A CD 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
metalc ? metalc2 A OE1 GLU 112 A GLU 112 1_555 F CD CD . A CD 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? 
metalc ? metalc3 A SG CYS 303 A CYS 303 1_555 C FE3 SF4 . A SF4 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc4 A NE2 HIS 307 A HIS 307 1_555 E CD CD . A CD 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? 
metalc ? metalc5 A SG CYS 327 A CYS 327 1_555 C FE1 SF4 . A SF4 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
metalc ? metalc6 A SG CYS 334 A CYS 334 1_555 C FE4 SF4 . A SF4 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc7 A SG CYS 337 A CYS 337 1_555 C FE2 SF4 . A SF4 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc8 A OE1 GLU 343 A GLU 343 1_555 D CD CD . A CD 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? 
metalc ? metalc9 A OE2 GLU 343 A GLU 343 1_555 D CD CD . A CD 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc10 A OE1 GLU 346 A GLU 346 1_555 D CD CD . A CD 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? 
metalc ? metalc11 A OE2 GLU 346 A GLU 346 1_555 D CD CD . A CD 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? 
metalc ? metalc12 E CD CD . A CD 375 1_555 G O HOH . A HOH 583 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc13 E CD CD . A CD 375 1_555 G O HOH . A HOH 584 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? 
metalc ? metalc14 F CD CD . A CD 376 1_555 B N TRP . A TRP 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? 
#
_chem_comp.formula           'Cd 2' 
_chem_comp.formula_weight    112.411 
_chem_comp.id                CD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CADMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3A05 
_atom_sites.fract_transf_matrix[1][1]    0.010182 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009716 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010241 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TRP A 1 377 377 TRP TRP . 
C 3 SF4 A 1 373 373 SF4 FS4 . 
D 4 CD A 1 374 374 CD CD . 
E 4 CD A 1 375 375 CD CD . 
F 4 CD A 1 376 376 CD CD . 
G 5 HOH A 1 378 378 HOH HOH . 
G 5 HOH A 2 379 379 HOH HOH . 
G 5 HOH A 3 380 380 HOH HOH . 
G 5 HOH A 4 381 381 HOH HOH . 
G 5 HOH A 5 382 382 HOH HOH . 
G 5 HOH A 6 383 383 HOH HOH . 
G 5 HOH A 7 384 384 HOH HOH . 
G 5 HOH A 8 385 385 HOH HOH . 
G 5 HOH A 9 386 386 HOH HOH . 
G 5 HOH A 10 387 387 HOH HOH . 
G 5 HOH A 11 388 388 HOH HOH . 
G 5 HOH A 12 389 389 HOH HOH . 
G 5 HOH A 13 390 390 HOH HOH . 
G 5 HOH A 14 391 391 HOH HOH . 
G 5 HOH A 15 392 392 HOH HOH . 
G 5 HOH A 16 393 393 HOH HOH . 
G 5 HOH A 17 394 394 HOH HOH . 
G 5 HOH A 18 395 395 HOH HOH . 
G 5 HOH A 19 396 396 HOH HOH . 
G 5 HOH A 20 397 397 HOH HOH . 
G 5 HOH A 21 398 398 HOH HOH . 
G 5 HOH A 22 399 399 HOH HOH . 
G 5 HOH A 23 400 400 HOH HOH . 
G 5 HOH A 24 401 401 HOH HOH . 
G 5 HOH A 25 402 402 HOH HOH . 
G 5 HOH A 26 403 403 HOH HOH . 
G 5 HOH A 27 404 404 HOH HOH . 
G 5 HOH A 28 405 405 HOH HOH . 
G 5 HOH A 29 406 406 HOH HOH . 
G 5 HOH A 30 407 407 HOH HOH . 
G 5 HOH A 31 408 408 HOH HOH . 
G 5 HOH A 32 409 409 HOH HOH . 
G 5 HOH A 33 410 410 HOH HOH . 
G 5 HOH A 34 411 411 HOH HOH . 
G 5 HOH A 35 412 412 HOH HOH . 
G 5 HOH A 36 413 413 HOH HOH . 
G 5 HOH A 37 414 414 HOH HOH . 
G 5 HOH A 38 415 415 HOH HOH . 
G 5 HOH A 39 416 416 HOH HOH . 
G 5 HOH A 40 417 417 HOH HOH . 
G 5 HOH A 41 418 418 HOH HOH . 
G 5 HOH A 42 419 419 HOH HOH . 
G 5 HOH A 43 420 420 HOH HOH . 
G 5 HOH A 44 421 421 HOH HOH . 
G 5 HOH A 45 422 422 HOH HOH . 
G 5 HOH A 46 423 423 HOH HOH . 
G 5 HOH A 47 424 424 HOH HOH . 
G 5 HOH A 48 425 425 HOH HOH . 
G 5 HOH A 49 426 426 HOH HOH . 
G 5 HOH A 50 427 427 HOH HOH . 
G 5 HOH A 51 428 428 HOH HOH . 
G 5 HOH A 52 429 429 HOH HOH . 
G 5 HOH A 53 430 430 HOH HOH . 
G 5 HOH A 54 431 431 HOH HOH . 
G 5 HOH A 55 432 432 HOH HOH . 
G 5 HOH A 56 433 433 HOH HOH . 
G 5 HOH A 57 434 434 HOH HOH . 
G 5 HOH A 58 435 435 HOH HOH . 
G 5 HOH A 59 436 436 HOH HOH . 
G 5 HOH A 60 437 437 HOH HOH . 
G 5 HOH A 61 438 438 HOH HOH . 
G 5 HOH A 62 439 439 HOH HOH . 
G 5 HOH A 63 440 440 HOH HOH . 
G 5 HOH A 64 441 441 HOH HOH . 
G 5 HOH A 65 442 442 HOH HOH . 
G 5 HOH A 66 443 443 HOH HOH . 
G 5 HOH A 67 444 444 HOH HOH . 
G 5 HOH A 68 445 445 HOH HOH . 
G 5 HOH A 69 446 446 HOH HOH . 
G 5 HOH A 70 447 447 HOH HOH . 
G 5 HOH A 71 448 448 HOH HOH . 
G 5 HOH A 72 449 449 HOH HOH . 
G 5 HOH A 73 450 450 HOH HOH . 
G 5 HOH A 74 451 451 HOH HOH . 
G 5 HOH A 75 452 452 HOH HOH . 
G 5 HOH A 76 453 453 HOH HOH . 
G 5 HOH A 77 454 454 HOH HOH . 
G 5 HOH A 78 455 455 HOH HOH . 
G 5 HOH A 79 456 456 HOH HOH . 
G 5 HOH A 80 457 457 HOH HOH . 
G 5 HOH A 81 458 458 HOH HOH . 
G 5 HOH A 82 459 459 HOH HOH . 
G 5 HOH A 83 460 460 HOH HOH . 
G 5 HOH A 84 461 461 HOH HOH . 
G 5 HOH A 85 462 462 HOH HOH . 
G 5 HOH A 86 463 463 HOH HOH . 
G 5 HOH A 87 464 464 HOH HOH . 
G 5 HOH A 88 465 465 HOH HOH . 
G 5 HOH A 89 466 466 HOH HOH . 
G 5 HOH A 90 467 467 HOH HOH . 
G 5 HOH A 91 468 468 HOH HOH . 
G 5 HOH A 92 469 469 HOH HOH . 
G 5 HOH A 93 470 470 HOH HOH . 
G 5 HOH A 94 471 471 HOH HOH . 
G 5 HOH A 95 472 472 HOH HOH . 
G 5 HOH A 96 473 473 HOH HOH . 
G 5 HOH A 97 474 474 HOH HOH . 
G 5 HOH A 98 475 475 HOH HOH . 
G 5 HOH A 99 476 476 HOH HOH . 
G 5 HOH A 100 477 477 HOH HOH . 
G 5 HOH A 101 478 478 HOH HOH . 
G 5 HOH A 102 479 479 HOH HOH . 
G 5 HOH A 103 480 480 HOH HOH . 
G 5 HOH A 104 481 481 HOH HOH . 
G 5 HOH A 105 482 482 HOH HOH . 
G 5 HOH A 106 483 483 HOH HOH . 
G 5 HOH A 107 484 484 HOH HOH . 
G 5 HOH A 108 485 485 HOH HOH . 
G 5 HOH A 109 486 486 HOH HOH . 
G 5 HOH A 110 487 487 HOH HOH . 
G 5 HOH A 111 488 488 HOH HOH . 
G 5 HOH A 112 489 489 HOH HOH . 
G 5 HOH A 113 490 490 HOH HOH . 
G 5 HOH A 114 491 491 HOH HOH . 
G 5 HOH A 115 492 492 HOH HOH . 
G 5 HOH A 116 493 493 HOH HOH . 
G 5 HOH A 117 494 494 HOH HOH . 
G 5 HOH A 118 495 495 HOH HOH . 
G 5 HOH A 119 496 496 HOH HOH . 
G 5 HOH A 120 497 497 HOH HOH . 
G 5 HOH A 121 498 498 HOH HOH . 
G 5 HOH A 122 499 499 HOH HOH . 
G 5 HOH A 123 500 500 HOH HOH . 
G 5 HOH A 124 501 501 HOH HOH . 
G 5 HOH A 125 502 502 HOH HOH . 
G 5 HOH A 126 503 503 HOH HOH . 
G 5 HOH A 127 504 504 HOH HOH . 
G 5 HOH A 128 505 505 HOH HOH . 
G 5 HOH A 129 506 506 HOH HOH . 
G 5 HOH A 130 507 507 HOH HOH . 
G 5 HOH A 131 508 508 HOH HOH . 
G 5 HOH A 132 509 509 HOH HOH . 
G 5 HOH A 133 510 510 HOH HOH . 
G 5 HOH A 134 511 511 HOH HOH . 
G 5 HOH A 135 512 512 HOH HOH . 
G 5 HOH A 136 513 513 HOH HOH . 
G 5 HOH A 137 514 514 HOH HOH . 
G 5 HOH A 138 515 515 HOH HOH . 
G 5 HOH A 139 516 516 HOH HOH . 
G 5 HOH A 140 517 517 HOH HOH . 
G 5 HOH A 141 518 518 HOH HOH . 
G 5 HOH A 142 519 519 HOH HOH . 
G 5 HOH A 143 520 520 HOH HOH . 
G 5 HOH A 144 521 521 HOH HOH . 
G 5 HOH A 145 522 522 HOH HOH . 
G 5 HOH A 146 523 523 HOH HOH . 
G 5 HOH A 147 524 524 HOH HOH . 
G 5 HOH A 148 525 525 HOH HOH . 
G 5 HOH A 149 526 526 HOH HOH . 
G 5 HOH A 150 527 527 HOH HOH . 
G 5 HOH A 151 528 528 HOH HOH . 
G 5 HOH A 152 529 529 HOH HOH . 
G 5 HOH A 153 530 530 HOH HOH . 
G 5 HOH A 154 531 531 HOH HOH . 
G 5 HOH A 155 532 532 HOH HOH . 
G 5 HOH A 156 533 533 HOH HOH . 
G 5 HOH A 157 534 534 HOH HOH . 
G 5 HOH A 158 535 535 HOH HOH . 
G 5 HOH A 159 536 536 HOH HOH . 
G 5 HOH A 160 537 537 HOH HOH . 
G 5 HOH A 161 538 538 HOH HOH . 
G 5 HOH A 162 539 539 HOH HOH . 
G 5 HOH A 163 540 540 HOH HOH . 
G 5 HOH A 164 541 541 HOH HOH . 
G 5 HOH A 165 542 542 HOH HOH . 
G 5 HOH A 166 543 543 HOH HOH . 
G 5 HOH A 167 544 544 HOH HOH . 
G 5 HOH A 168 545 545 HOH HOH . 
G 5 HOH A 169 546 546 HOH HOH . 
G 5 HOH A 170 547 547 HOH HOH . 
G 5 HOH A 171 548 548 HOH HOH . 
G 5 HOH A 172 549 549 HOH HOH . 
G 5 HOH A 173 550 550 HOH HOH . 
G 5 HOH A 174 551 551 HOH HOH . 
G 5 HOH A 175 552 552 HOH HOH . 
G 5 HOH A 176 553 553 HOH HOH . 
G 5 HOH A 177 554 554 HOH HOH . 
G 5 HOH A 178 555 555 HOH HOH . 
G 5 HOH A 179 556 556 HOH HOH . 
G 5 HOH A 180 557 557 HOH HOH . 
G 5 HOH A 181 558 558 HOH HOH . 
G 5 HOH A 182 559 559 HOH HOH . 
G 5 HOH A 183 560 560 HOH HOH . 
G 5 HOH A 184 561 561 HOH HOH . 
G 5 HOH A 185 562 562 HOH HOH . 
G 5 HOH A 186 563 563 HOH HOH . 
G 5 HOH A 187 564 564 HOH HOH . 
G 5 HOH A 188 565 565 HOH HOH . 
G 5 HOH A 189 566 566 HOH HOH . 
G 5 HOH A 190 567 567 HOH HOH . 
G 5 HOH A 191 568 568 HOH HOH . 
G 5 HOH A 192 569 569 HOH HOH . 
G 5 HOH A 193 570 570 HOH HOH . 
G 5 HOH A 194 571 571 HOH HOH . 
G 5 HOH A 195 572 572 HOH HOH . 
G 5 HOH A 196 573 573 HOH HOH . 
G 5 HOH A 197 574 574 HOH HOH . 
G 5 HOH A 198 575 575 HOH HOH . 
G 5 HOH A 199 576 576 HOH HOH . 
G 5 HOH A 200 577 577 HOH HOH . 
G 5 HOH A 201 578 578 HOH HOH . 
G 5 HOH A 202 579 579 HOH HOH . 
G 5 HOH A 203 580 580 HOH HOH . 
G 5 HOH A 204 581 581 HOH HOH . 
G 5 HOH A 205 582 582 HOH HOH . 
G 5 HOH A 206 583 583 HOH HOH . 
G 5 HOH A 207 584 584 HOH HOH . 
G 5 HOH A 208 585 585 HOH HOH . 
G 5 HOH A 209 586 586 HOH HOH . 
G 5 HOH A 210 587 587 HOH HOH . 
G 5 HOH A 211 588 588 HOH HOH . 
G 5 HOH A 212 589 589 HOH HOH . 
G 5 HOH A 213 590 590 HOH HOH . 
G 5 HOH A 214 591 591 HOH HOH . 
G 5 HOH A 215 592 592 HOH HOH . 
G 5 HOH A 216 593 593 HOH HOH . 
G 5 HOH A 217 594 594 HOH HOH . 
G 5 HOH A 218 595 595 HOH HOH . 
G 5 HOH A 219 596 596 HOH HOH . 
G 5 HOH A 220 597 597 HOH HOH . 
G 5 HOH A 221 598 598 HOH HOH . 
G 5 HOH A 222 599 599 HOH HOH . 
G 5 HOH A 223 600 600 HOH HOH . 
G 5 HOH A 224 601 601 HOH HOH . 
G 5 HOH A 225 602 602 HOH HOH . 
G 5 HOH A 226 603 603 HOH HOH . 
G 5 HOH A 227 604 604 HOH HOH . 
G 5 HOH A 228 605 605 HOH HOH . 
G 5 HOH A 229 606 606 HOH HOH . 
G 5 HOH A 230 607 607 HOH HOH . 
G 5 HOH A 231 608 608 HOH HOH . 
G 5 HOH A 232 609 609 HOH HOH . 
G 5 HOH A 233 610 610 HOH HOH . 
G 5 HOH A 234 611 611 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CD 
_atom_site.label_atom_id         CD 
_atom_site.label_comp_id         CD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -4.278 
_atom_site.Cartn_y               -22.832 
_atom_site.Cartn_z               -1.583 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.63 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CD 
_atom_site.auth_comp_id          CD 
_atom_site.auth_seq_id           374 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#