data_3A06
#
_model_server_result.job_id            LFTPBvy-qFQ2A_oa92MWPg 
_model_server_result.datetime_utc      '2024-11-05 00:34:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3a06 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":900}' 
#
_entry.id    3A06 
#
_exptl.entry_id    3A06 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              183.1 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3A06 
_cell.length_a            108.622 
_cell.length_b            108.622 
_cell.length_c            74.662 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3A06 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 142 A ASP 142 1_555 F MG MG . A MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc2 A OE1 GLU 144 A GLU 144 1_555 F MG MG . A MG 500 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.888 ? 
metalc ? metalc3 A OE2 GLU 209 A GLU 209 1_555 F MG MG . A MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc4 F MG MG . A MG 500 1_555 J O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? 
metalc ? metalc5 F MG MG . A MG 500 1_555 J O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc6 F MG MG . A MG 500 1_555 J O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc7 B OD1 ASP 142 B ASP 142 1_555 I MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? 
metalc ? metalc8 B OE1 GLU 144 B GLU 144 1_555 I MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
metalc ? metalc9 B OE2 GLU 209 B GLU 209 1_555 I MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? 
metalc ? metalc10 K O HOH . B HOH 380 1_555 I MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
#
_chem_comp.formula           'C4 H10 N O5 P' 
_chem_comp.formula_weight    183.1 
_chem_comp.id                FOM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     FOSMIDOMYCIN 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 N1 FOM sing 83 n n 
O2 HO2 FOM sing 84 n n 
N1 C1 FOM sing 85 n n 
N1 C2 FOM sing 86 n n 
C1 O1 FOM doub 87 n n 
C1 H1 FOM sing 88 n n 
C2 C3 FOM sing 89 n n 
C2 H21 FOM sing 90 n n 
C2 H22 FOM sing 91 n n 
C3 C4 FOM sing 92 n n 
C3 H31 FOM sing 93 n n 
C3 H32 FOM sing 94 n n 
C4 PA1 FOM sing 95 n n 
C4 H41 FOM sing 96 n n 
C4 H42 FOM sing 97 n n 
PA1 OP1 FOM doub 98 n n 
PA1 OP2 FOM sing 99 n n 
PA1 OP3 FOM sing 100 n n 
OP2 HP2 FOM sing 101 n n 
OP3 HP3 FOM sing 102 n n 
#
_atom_sites.entry_id                     3A06 
_atom_sites.fract_transf_matrix[1][1]    0.009206 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009206 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013394 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 3001 3001 NDP NDP . 
D 2 NDP A 1 3003 3003 NDP NDP . 
E 3 FOM A 1 900 900 FOM FOM . 
F 4 MG A 1 500 500 MG MG . 
G 2 NDP B 1 3002 3002 NDP NDP . 
H 3 FOM B 1 901 901 FOM FOM . 
I 4 MG B 1 501 501 MG MG . 
J 5 HOH A 1 377 377 HOH HOH . 
J 5 HOH A 2 378 378 HOH HOH . 
J 5 HOH A 3 379 379 HOH HOH . 
J 5 HOH A 4 380 380 HOH HOH . 
J 5 HOH A 5 381 381 HOH HOH . 
J 5 HOH A 6 382 382 HOH HOH . 
J 5 HOH A 7 383 383 HOH HOH . 
J 5 HOH A 8 384 384 HOH HOH . 
J 5 HOH A 9 385 385 HOH HOH . 
J 5 HOH A 10 386 386 HOH HOH . 
J 5 HOH A 11 387 400 HOH HOH . 
J 5 HOH A 12 388 388 HOH HOH . 
J 5 HOH A 13 389 389 HOH HOH . 
J 5 HOH A 14 390 390 HOH HOH . 
J 5 HOH A 15 391 391 HOH HOH . 
J 5 HOH A 16 392 392 HOH HOH . 
J 5 HOH A 17 393 393 HOH HOH . 
J 5 HOH A 18 394 394 HOH HOH . 
J 5 HOH A 19 395 395 HOH HOH . 
J 5 HOH A 20 396 396 HOH HOH . 
J 5 HOH A 21 397 397 HOH HOH . 
J 5 HOH A 22 398 398 HOH HOH . 
J 5 HOH A 23 399 399 HOH HOH . 
J 5 HOH A 24 400 400 HOH HOH . 
J 5 HOH A 25 401 401 HOH HOH . 
J 5 HOH A 26 402 402 HOH HOH . 
J 5 HOH A 27 403 403 HOH HOH . 
J 5 HOH A 28 404 404 HOH HOH . 
J 5 HOH A 29 405 405 HOH HOH . 
J 5 HOH A 30 406 406 HOH HOH . 
J 5 HOH A 31 407 407 HOH HOH . 
J 5 HOH A 32 408 408 HOH HOH . 
J 5 HOH A 33 409 409 HOH HOH . 
J 5 HOH A 34 410 410 HOH HOH . 
J 5 HOH A 35 411 411 HOH HOH . 
J 5 HOH A 36 412 412 HOH HOH . 
J 5 HOH A 37 413 413 HOH HOH . 
J 5 HOH A 38 414 414 HOH HOH . 
J 5 HOH A 39 415 415 HOH HOH . 
J 5 HOH A 40 416 416 HOH HOH . 
J 5 HOH A 41 418 418 HOH HOH . 
J 5 HOH A 42 419 419 HOH HOH . 
J 5 HOH A 43 420 420 HOH HOH . 
J 5 HOH A 44 421 421 HOH HOH . 
J 5 HOH A 45 422 422 HOH HOH . 
J 5 HOH A 46 423 423 HOH HOH . 
J 5 HOH A 47 424 424 HOH HOH . 
J 5 HOH A 48 425 425 HOH HOH . 
J 5 HOH A 49 426 426 HOH HOH . 
J 5 HOH A 50 430 430 HOH HOH . 
J 5 HOH A 51 431 431 HOH HOH . 
J 5 HOH A 52 432 432 HOH HOH . 
J 5 HOH A 53 435 435 HOH HOH . 
J 5 HOH A 54 439 439 HOH HOH . 
J 5 HOH A 55 441 441 HOH HOH . 
J 5 HOH A 56 442 442 HOH HOH . 
J 5 HOH A 57 601 601 HOH HOH . 
J 5 HOH A 58 602 602 HOH HOH . 
J 5 HOH A 59 603 603 HOH HOH . 
K 5 HOH B 1 377 377 HOH HOH . 
K 5 HOH B 2 378 378 HOH HOH . 
K 5 HOH B 3 379 379 HOH HOH . 
K 5 HOH B 4 380 380 HOH HOH . 
K 5 HOH B 5 381 381 HOH HOH . 
K 5 HOH B 6 382 382 HOH HOH . 
K 5 HOH B 7 383 383 HOH HOH . 
K 5 HOH B 8 384 384 HOH HOH . 
K 5 HOH B 9 385 385 HOH HOH . 
K 5 HOH B 10 386 386 HOH HOH . 
K 5 HOH B 11 387 387 HOH HOH . 
K 5 HOH B 12 388 388 HOH HOH . 
K 5 HOH B 13 389 389 HOH HOH . 
K 5 HOH B 14 390 390 HOH HOH . 
K 5 HOH B 15 391 391 HOH HOH . 
K 5 HOH B 16 392 392 HOH HOH . 
K 5 HOH B 17 393 393 HOH HOH . 
K 5 HOH B 18 394 394 HOH HOH . 
K 5 HOH B 19 395 395 HOH HOH . 
K 5 HOH B 20 396 396 HOH HOH . 
K 5 HOH B 21 397 397 HOH HOH . 
K 5 HOH B 22 398 398 HOH HOH . 
K 5 HOH B 23 401 401 HOH HOH . 
K 5 HOH B 24 402 402 HOH HOH . 
K 5 HOH B 25 404 404 HOH HOH . 
K 5 HOH B 26 405 405 HOH HOH . 
K 5 HOH B 27 406 406 HOH HOH . 
K 5 HOH B 28 407 407 HOH HOH . 
K 5 HOH B 29 408 408 HOH HOH . 
K 5 HOH B 30 409 409 HOH HOH . 
K 5 HOH B 31 410 410 HOH HOH . 
K 5 HOH B 32 411 411 HOH HOH . 
K 5 HOH B 33 412 412 HOH HOH . 
K 5 HOH B 34 413 413 HOH HOH . 
K 5 HOH B 35 414 414 HOH HOH . 
K 5 HOH B 36 415 415 HOH HOH . 
K 5 HOH B 37 416 416 HOH HOH . 
K 5 HOH B 38 417 417 HOH HOH . 
K 5 HOH B 39 418 418 HOH HOH . 
K 5 HOH B 40 419 419 HOH HOH . 
K 5 HOH B 41 420 420 HOH HOH . 
K 5 HOH B 42 421 421 HOH HOH . 
K 5 HOH B 43 422 422 HOH HOH . 
K 5 HOH B 44 423 423 HOH HOH . 
K 5 HOH B 45 424 424 HOH HOH . 
K 5 HOH B 46 425 425 HOH HOH . 
K 5 HOH B 47 426 426 HOH HOH . 
K 5 HOH B 48 427 427 HOH HOH . 
K 5 HOH B 49 428 428 HOH HOH . 
K 5 HOH B 50 434 434 HOH HOH . 
K 5 HOH B 51 436 436 HOH HOH . 
K 5 HOH B 52 437 437 HOH HOH . 
K 5 HOH B 53 438 438 HOH HOH . 
K 5 HOH B 54 440 440 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 FOM . . . E 3 8.107 20.475 11.483 1 57.53 ? C4 FOM 900 A 1 
HETATM 2 P PA1 FOM . . . E 3 7.193 20.186 9.944 1 59.4 ? PA1 FOM 900 A 1 
HETATM 3 O OP1 FOM . . . E 3 6.018 21.113 9.878 1 57.56 ? OP1 FOM 900 A 1 
HETATM 4 O OP2 FOM . . . E 3 6.838 18.627 9.781 1 56.64 ? OP2 FOM 900 A 1 
HETATM 5 O OP3 FOM . . . E 3 8.248 20.385 8.746 1 58.65 ? OP3 FOM 900 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#