data_3A0U # _model_server_result.job_id sfC4IJ042j53BrYWu-ZtjA _model_server_result.datetime_utc '2024-11-18 11:32:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3a0u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 3A0U # _exptl.entry_id 3A0U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3A0U _cell.length_a 32.978 _cell.length_b 32.978 _cell.length_c 196.968 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3A0U _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 9 A ASP 9 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc2 A OD2 ASP 52 A ASP 52 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc3 A OD1 ASP 52 A ASP 52 1_555 C BE BEF . A BEF 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.556 ? metalc ? metalc4 A O GLU 54 A GLU 54 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc5 G O HOH . A HOH 120 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc6 G O HOH . A HOH 125 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 227 n n O1 HO1 PG4 sing 228 n n C1 C2 PG4 sing 229 n n C1 H11 PG4 sing 230 n n C1 H12 PG4 sing 231 n n C2 O2 PG4 sing 232 n n C2 H21 PG4 sing 233 n n C2 H22 PG4 sing 234 n n O2 C3 PG4 sing 235 n n C3 C4 PG4 sing 236 n n C3 H31 PG4 sing 237 n n C3 H32 PG4 sing 238 n n C4 O3 PG4 sing 239 n n C4 H41 PG4 sing 240 n n C4 H42 PG4 sing 241 n n O3 C5 PG4 sing 242 n n C5 C6 PG4 sing 243 n n C5 H51 PG4 sing 244 n n C5 H52 PG4 sing 245 n n C6 O4 PG4 sing 246 n n C6 H61 PG4 sing 247 n n C6 H62 PG4 sing 248 n n O4 C7 PG4 sing 249 n n C7 C8 PG4 sing 250 n n C7 H71 PG4 sing 251 n n C7 H72 PG4 sing 252 n n C8 O5 PG4 sing 253 n n C8 H81 PG4 sing 254 n n C8 H82 PG4 sing 255 n n O5 HO5 PG4 sing 256 n n # _atom_sites.entry_id 3A0U _atom_sites.fract_transf_matrix[1][1] 0.030323 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.030323 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005077 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 201 201 MG MG . C 3 BEF A 1 202 202 BEF BEF . D 4 PG4 A 1 203 203 PG4 PG4 . E 4 PG4 A 1 204 204 PG4 PG4 . F 4 PG4 A 1 205 205 PG4 PG4 . G 5 HOH A 1 117 1 HOH HOH . G 5 HOH A 2 118 2 HOH HOH . G 5 HOH A 3 119 3 HOH HOH . G 5 HOH A 4 120 4 HOH HOH . G 5 HOH A 5 121 5 HOH HOH . G 5 HOH A 6 122 6 HOH HOH . G 5 HOH A 7 123 7 HOH HOH . G 5 HOH A 8 124 8 HOH HOH . G 5 HOH A 9 125 9 HOH HOH . G 5 HOH A 10 126 10 HOH HOH . G 5 HOH A 11 127 11 HOH HOH . G 5 HOH A 12 128 12 HOH HOH . G 5 HOH A 13 129 13 HOH HOH . G 5 HOH A 14 130 14 HOH HOH . G 5 HOH A 15 131 15 HOH HOH . G 5 HOH A 16 132 16 HOH HOH . G 5 HOH A 17 133 17 HOH HOH . G 5 HOH A 18 134 18 HOH HOH . G 5 HOH A 19 135 19 HOH HOH . G 5 HOH A 20 136 20 HOH HOH . G 5 HOH A 21 137 21 HOH HOH . G 5 HOH A 22 138 22 HOH HOH . G 5 HOH A 23 139 23 HOH HOH . G 5 HOH A 24 140 24 HOH HOH . G 5 HOH A 25 141 25 HOH HOH . G 5 HOH A 26 142 26 HOH HOH . G 5 HOH A 27 143 27 HOH HOH . G 5 HOH A 28 144 28 HOH HOH . G 5 HOH A 29 145 29 HOH HOH . G 5 HOH A 30 146 30 HOH HOH . G 5 HOH A 31 147 31 HOH HOH . G 5 HOH A 32 148 32 HOH HOH . G 5 HOH A 33 149 33 HOH HOH . G 5 HOH A 34 150 34 HOH HOH . G 5 HOH A 35 151 35 HOH HOH . G 5 HOH A 36 152 36 HOH HOH . G 5 HOH A 37 153 37 HOH HOH . G 5 HOH A 38 154 38 HOH HOH . G 5 HOH A 39 155 39 HOH HOH . G 5 HOH A 40 156 40 HOH HOH . G 5 HOH A 41 157 41 HOH HOH . G 5 HOH A 42 158 42 HOH HOH . G 5 HOH A 43 159 43 HOH HOH . G 5 HOH A 44 160 44 HOH HOH . G 5 HOH A 45 161 45 HOH HOH . G 5 HOH A 46 162 46 HOH HOH . G 5 HOH A 47 163 47 HOH HOH . G 5 HOH A 48 164 48 HOH HOH . G 5 HOH A 49 165 49 HOH HOH . G 5 HOH A 50 166 50 HOH HOH . G 5 HOH A 51 167 51 HOH HOH . G 5 HOH A 52 168 52 HOH HOH . G 5 HOH A 53 169 53 HOH HOH . G 5 HOH A 54 170 54 HOH HOH . G 5 HOH A 55 171 55 HOH HOH . G 5 HOH A 56 172 56 HOH HOH . G 5 HOH A 57 173 57 HOH HOH . G 5 HOH A 58 174 58 HOH HOH . G 5 HOH A 59 175 59 HOH HOH . G 5 HOH A 60 176 60 HOH HOH . G 5 HOH A 61 177 61 HOH HOH . G 5 HOH A 62 178 62 HOH HOH . G 5 HOH A 63 179 63 HOH HOH . G 5 HOH A 64 180 64 HOH HOH . G 5 HOH A 65 181 65 HOH HOH . G 5 HOH A 66 182 66 HOH HOH . G 5 HOH A 67 183 67 HOH HOH . G 5 HOH A 68 184 68 HOH HOH . G 5 HOH A 69 185 69 HOH HOH . G 5 HOH A 70 186 70 HOH HOH . G 5 HOH A 71 187 71 HOH HOH . G 5 HOH A 72 188 72 HOH HOH . G 5 HOH A 73 189 73 HOH HOH . G 5 HOH A 74 190 74 HOH HOH . G 5 HOH A 75 191 75 HOH HOH . G 5 HOH A 76 192 76 HOH HOH . G 5 HOH A 77 193 77 HOH HOH . G 5 HOH A 78 194 78 HOH HOH . G 5 HOH A 79 195 79 HOH HOH . G 5 HOH A 80 196 80 HOH HOH . G 5 HOH A 81 197 81 HOH HOH . G 5 HOH A 82 198 82 HOH HOH . G 5 HOH A 83 199 83 HOH HOH . G 5 HOH A 84 200 84 HOH HOH . G 5 HOH A 85 206 85 HOH HOH . G 5 HOH A 86 207 86 HOH HOH . G 5 HOH A 87 208 87 HOH HOH . G 5 HOH A 88 209 88 HOH HOH . G 5 HOH A 89 210 89 HOH HOH . G 5 HOH A 90 211 90 HOH HOH . G 5 HOH A 91 212 91 HOH HOH . G 5 HOH A 92 213 92 HOH HOH . G 5 HOH A 93 214 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . F 4 12.245 11.362 87.539 1 36.71 ? O1 PG4 205 A 1 HETATM 2 C C1 PG4 . . . F 4 11.998 12.292 86.484 1 34.23 ? C1 PG4 205 A 1 HETATM 3 C C2 PG4 . . . F 4 12.195 11.641 85.124 1 33.25 ? C2 PG4 205 A 1 HETATM 4 O O2 PG4 . . . F 4 12.536 12.675 84.183 1 33.08 ? O2 PG4 205 A 1 HETATM 5 C C3 PG4 . . . F 4 12.435 12.315 82.796 1 33.01 ? C3 PG4 205 A 1 HETATM 6 C C4 PG4 . . . F 4 12.033 10.871 82.52 1 31.8 ? C4 PG4 205 A 1 HETATM 7 O O3 PG4 . . . F 4 13.227 10.083 82.426 1 32.97 ? O3 PG4 205 A 1 HETATM 8 C C5 PG4 . . . F 4 13.152 8.794 81.811 1 31.29 ? C5 PG4 205 A 1 HETATM 9 C C6 PG4 . . . F 4 11.747 8.238 81.719 1 33.53 ? C6 PG4 205 A 1 HETATM 10 O O4 PG4 . . . F 4 11.736 7.079 80.892 1 34.23 ? O4 PG4 205 A 1 HETATM 11 C C7 PG4 . . . F 4 10.757 7.145 79.836 1 33.64 ? C7 PG4 205 A 1 HETATM 12 C C8 PG4 . . . F 4 9.517 7.962 80.226 1 32.75 ? C8 PG4 205 A 1 HETATM 13 O O5 PG4 . . . F 4 8.356 7.127 80.314 1 34.15 ? O5 PG4 205 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 504 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 13 #