data_3A10
#
_model_server_result.job_id            YNAi8fNjmdfxn0Qe2MAIDQ 
_model_server_result.datetime_utc      '2024-11-18 11:26:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3a10 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    3A10 
#
_exptl.entry_id    3A10 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              66.007 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'BERYLLIUM TRIFLUORIDE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3A10 
_cell.length_a            32.678 
_cell.length_b            32.678 
_cell.length_c            199.242 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3A10 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 1 A MSE 1 1_555 A N LYS 2 A LYS 2 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale2 A C MSE 1 A MSE 1 1_555 A N LYS 2 A LYS 2 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 A C MSE 1 A MSE 1 1_555 A N LYS 2 A LYS 2 1_555 ? C ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 A C GLU 54 A GLU 54 1_555 A N MSE 55 A MSE 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale5 A C MSE 55 A MSE 55 1_555 A N PRO 56 A PRO 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale6 A C ASP 88 A ASP 88 1_555 A N MSE 89 A MSE 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale7 A C MSE 89 A MSE 89 1_555 A N SER 90 A SER 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
metalc ? metalc1 A OD1 ASP 9 A ASP 9 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
metalc ? metalc2 A OD2 ASP 52 A ASP 52 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc3 A OD1 ASP 52 A ASP 52 1_555 C BE BEF . A BEF 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.556 ? 
metalc ? metalc4 A O GLU 54 A GLU 54 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc5 F O HOH . A HOH 117 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
metalc ? metalc6 F O HOH . A HOH 126 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? 
#
_chem_comp.formula           'Be F3 -1' 
_chem_comp.formula_weight    66.007 
_chem_comp.id                BEF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'BERYLLIUM TRIFLUORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
BE F1 BEF sing 70 n n 
BE F2 BEF sing 71 n n 
BE F3 BEF sing 72 n n 
#
_atom_sites.entry_id                     3A10 
_atom_sites.fract_transf_matrix[1][1]    0.030602 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.030602 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005019 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 201 201 MG MG . 
C 3 BEF A 1 202 202 BEF BEF . 
D 4 PG4 A 1 203 203 PG4 PG4 . 
E 4 PG4 A 1 204 204 PG4 PG4 . 
F 5 HOH A 1 117 1 HOH HOH . 
F 5 HOH A 2 118 2 HOH HOH . 
F 5 HOH A 3 119 3 HOH HOH . 
F 5 HOH A 4 120 4 HOH HOH . 
F 5 HOH A 5 121 5 HOH HOH . 
F 5 HOH A 6 122 6 HOH HOH . 
F 5 HOH A 7 123 7 HOH HOH . 
F 5 HOH A 8 124 8 HOH HOH . 
F 5 HOH A 9 125 9 HOH HOH . 
F 5 HOH A 10 126 10 HOH HOH . 
F 5 HOH A 11 127 11 HOH HOH . 
F 5 HOH A 12 128 12 HOH HOH . 
F 5 HOH A 13 129 13 HOH HOH . 
F 5 HOH A 14 130 14 HOH HOH . 
F 5 HOH A 15 131 15 HOH HOH . 
F 5 HOH A 16 132 16 HOH HOH . 
F 5 HOH A 17 133 17 HOH HOH . 
F 5 HOH A 18 134 18 HOH HOH . 
F 5 HOH A 19 135 19 HOH HOH . 
F 5 HOH A 20 136 20 HOH HOH . 
F 5 HOH A 21 137 21 HOH HOH . 
F 5 HOH A 22 138 22 HOH HOH . 
F 5 HOH A 23 139 23 HOH HOH . 
F 5 HOH A 24 140 24 HOH HOH . 
F 5 HOH A 25 141 25 HOH HOH . 
F 5 HOH A 26 142 26 HOH HOH . 
F 5 HOH A 27 143 27 HOH HOH . 
F 5 HOH A 28 144 28 HOH HOH . 
F 5 HOH A 29 145 29 HOH HOH . 
F 5 HOH A 30 146 30 HOH HOH . 
F 5 HOH A 31 147 31 HOH HOH . 
F 5 HOH A 32 148 32 HOH HOH . 
F 5 HOH A 33 149 33 HOH HOH . 
F 5 HOH A 34 150 34 HOH HOH . 
F 5 HOH A 35 151 35 HOH HOH . 
F 5 HOH A 36 152 36 HOH HOH . 
F 5 HOH A 37 153 37 HOH HOH . 
F 5 HOH A 38 154 38 HOH HOH . 
F 5 HOH A 39 155 39 HOH HOH . 
F 5 HOH A 40 156 41 HOH HOH . 
F 5 HOH A 41 157 42 HOH HOH . 
F 5 HOH A 42 158 43 HOH HOH . 
F 5 HOH A 43 159 44 HOH HOH . 
F 5 HOH A 44 160 45 HOH HOH . 
F 5 HOH A 45 161 46 HOH HOH . 
F 5 HOH A 46 162 47 HOH HOH . 
F 5 HOH A 47 163 48 HOH HOH . 
F 5 HOH A 48 164 49 HOH HOH . 
F 5 HOH A 49 165 50 HOH HOH . 
F 5 HOH A 50 166 51 HOH HOH . 
F 5 HOH A 51 167 52 HOH HOH . 
F 5 HOH A 52 168 53 HOH HOH . 
F 5 HOH A 53 169 54 HOH HOH . 
F 5 HOH A 54 170 55 HOH HOH . 
F 5 HOH A 55 171 56 HOH HOH . 
F 5 HOH A 56 172 57 HOH HOH . 
F 5 HOH A 57 173 58 HOH HOH . 
F 5 HOH A 58 174 59 HOH HOH . 
F 5 HOH A 59 175 60 HOH HOH . 
F 5 HOH A 60 176 61 HOH HOH . 
F 5 HOH A 61 177 62 HOH HOH . 
F 5 HOH A 62 178 63 HOH HOH . 
F 5 HOH A 63 179 64 HOH HOH . 
F 5 HOH A 64 180 65 HOH HOH . 
F 5 HOH A 65 181 66 HOH HOH . 
F 5 HOH A 66 182 67 HOH HOH . 
F 5 HOH A 67 183 68 HOH HOH . 
F 5 HOH A 68 184 69 HOH HOH . 
F 5 HOH A 69 185 70 HOH HOH . 
F 5 HOH A 70 186 71 HOH HOH . 
F 5 HOH A 71 187 72 HOH HOH . 
F 5 HOH A 72 188 73 HOH HOH . 
F 5 HOH A 73 189 74 HOH HOH . 
F 5 HOH A 74 190 75 HOH HOH . 
F 5 HOH A 75 191 77 HOH HOH . 
F 5 HOH A 76 192 78 HOH HOH . 
F 5 HOH A 77 193 79 HOH HOH . 
F 5 HOH A 78 194 80 HOH HOH . 
F 5 HOH A 79 195 82 HOH HOH . 
F 5 HOH A 80 196 83 HOH HOH . 
F 5 HOH A 81 197 84 HOH HOH . 
F 5 HOH A 82 198 85 HOH HOH . 
F 5 HOH A 83 199 86 HOH HOH . 
F 5 HOH A 84 200 87 HOH HOH . 
F 5 HOH A 85 205 88 HOH HOH . 
F 5 HOH A 86 206 89 HOH HOH . 
F 5 HOH A 87 207 90 HOH HOH . 
F 5 HOH A 88 208 91 HOH HOH . 
F 5 HOH A 89 209 92 HOH HOH . 
F 5 HOH A 90 210 93 HOH HOH . 
F 5 HOH A 91 211 94 HOH HOH . 
F 5 HOH A 92 212 95 HOH HOH . 
F 5 HOH A 93 213 96 HOH HOH . 
F 5 HOH A 94 214 97 HOH HOH . 
F 5 HOH A 95 215 98 HOH HOH . 
F 5 HOH A 96 216 100 HOH HOH . 
F 5 HOH A 97 217 101 HOH HOH . 
F 5 HOH A 98 218 102 HOH HOH . 
F 5 HOH A 99 219 103 HOH HOH . 
F 5 HOH A 100 220 104 HOH HOH . 
F 5 HOH A 101 221 105 HOH HOH . 
F 5 HOH A 102 222 107 HOH HOH . 
F 5 HOH A 103 223 108 HOH HOH . 
F 5 HOH A 104 224 109 HOH HOH . 
F 5 HOH A 105 225 110 HOH HOH . 
F 5 HOH A 106 226 111 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 BE BE BEF . . . C 3 32.057 0.884 88.451 1 14.68 ? BE BEF 202 A 1 
HETATM 2 F F1 BEF . . . C 3 32.76 2.152 87.578 1 10.79 ? F1 BEF 202 A 1 
HETATM 3 F F2 BEF . . . C 3 32.552 1.053 90.062 1 10.79 ? F2 BEF 202 A 1 
HETATM 4 F F3 BEF . . . C 3 32.754 -0.561 87.916 1 12.33 ? F3 BEF 202 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           246 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#