data_3A1F # _model_server_result.job_id vZtaa3sVpq9sPgSAQIdDgQ _model_server_result.datetime_utc '2025-04-22 08:33:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3a1f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":187}' # _entry.id 3A1F # _exptl.entry_id 3A1F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3A1F _cell.length_a 60.022 _cell.length_b 60.022 _cell.length_c 90.398 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3A1F _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3A1F _atom_sites.fract_transf_matrix[1][1] 0.016661 _atom_sites.fract_transf_matrix[1][2] 0.009619 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019238 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011062 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 187 187 NI NI . C 2 NI A 1 188 188 NI NI . D 2 NI A 1 189 189 NI NI . E 2 NI A 1 190 190 NI NI . F 2 NI A 1 191 191 NI NI . G 2 NI A 1 192 192 NI NI . H 2 NI A 1 193 193 NI NI . I 3 HOH A 1 194 194 HOH HOH . I 3 HOH A 2 195 195 HOH HOH . I 3 HOH A 3 196 196 HOH HOH . I 3 HOH A 4 197 197 HOH HOH . I 3 HOH A 5 198 198 HOH HOH . I 3 HOH A 6 199 199 HOH HOH . I 3 HOH A 7 200 200 HOH HOH . I 3 HOH A 8 201 201 HOH HOH . I 3 HOH A 9 202 202 HOH HOH . I 3 HOH A 10 203 203 HOH HOH . I 3 HOH A 11 204 204 HOH HOH . I 3 HOH A 12 205 205 HOH HOH . I 3 HOH A 13 206 206 HOH HOH . I 3 HOH A 14 207 207 HOH HOH . I 3 HOH A 15 208 208 HOH HOH . I 3 HOH A 16 209 209 HOH HOH . I 3 HOH A 17 210 210 HOH HOH . I 3 HOH A 18 211 211 HOH HOH . I 3 HOH A 19 212 212 HOH HOH . I 3 HOH A 20 213 213 HOH HOH . I 3 HOH A 21 214 214 HOH HOH . I 3 HOH A 22 215 215 HOH HOH . I 3 HOH A 23 216 216 HOH HOH . I 3 HOH A 24 217 217 HOH HOH . I 3 HOH A 25 218 218 HOH HOH . I 3 HOH A 26 219 219 HOH HOH . I 3 HOH A 27 220 220 HOH HOH . I 3 HOH A 28 221 221 HOH HOH . I 3 HOH A 29 222 222 HOH HOH . I 3 HOH A 30 223 223 HOH HOH . I 3 HOH A 31 224 224 HOH HOH . I 3 HOH A 32 225 225 HOH HOH . I 3 HOH A 33 226 226 HOH HOH . I 3 HOH A 34 227 227 HOH HOH . I 3 HOH A 35 228 228 HOH HOH . I 3 HOH A 36 229 229 HOH HOH . I 3 HOH A 37 230 230 HOH HOH . I 3 HOH A 38 231 231 HOH HOH . I 3 HOH A 39 232 232 HOH HOH . I 3 HOH A 40 233 233 HOH HOH . I 3 HOH A 41 234 234 HOH HOH . I 3 HOH A 42 235 235 HOH HOH . I 3 HOH A 43 236 236 HOH HOH . I 3 HOH A 44 237 237 HOH HOH . I 3 HOH A 45 238 238 HOH HOH . I 3 HOH A 46 239 239 HOH HOH . I 3 HOH A 47 240 240 HOH HOH . I 3 HOH A 48 241 241 HOH HOH . I 3 HOH A 49 242 242 HOH HOH . I 3 HOH A 50 243 243 HOH HOH . I 3 HOH A 51 244 244 HOH HOH . I 3 HOH A 52 245 245 HOH HOH . I 3 HOH A 53 246 246 HOH HOH . I 3 HOH A 54 247 247 HOH HOH . I 3 HOH A 55 248 248 HOH HOH . I 3 HOH A 56 249 249 HOH HOH . I 3 HOH A 57 250 250 HOH HOH . I 3 HOH A 58 251 251 HOH HOH . I 3 HOH A 59 252 252 HOH HOH . I 3 HOH A 60 253 253 HOH HOH . I 3 HOH A 61 254 254 HOH HOH . I 3 HOH A 62 255 255 HOH HOH . I 3 HOH A 63 256 256 HOH HOH . I 3 HOH A 64 257 257 HOH HOH . I 3 HOH A 65 258 258 HOH HOH . I 3 HOH A 66 259 259 HOH HOH . I 3 HOH A 67 260 260 HOH HOH . I 3 HOH A 68 261 261 HOH HOH . I 3 HOH A 69 262 262 HOH HOH . I 3 HOH A 70 263 263 HOH HOH . I 3 HOH A 71 264 264 HOH HOH . I 3 HOH A 72 265 265 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 25.356 _atom_site.Cartn_y 2.226 _atom_site.Cartn_z 4.395 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 63.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 187 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #