data_3A2H # _model_server_result.job_id 2V-2lwzn6piC1unkiGOkqw _model_server_result.datetime_utc '2024-12-26 13:59:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3a2h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3A2H # _exptl.entry_id 3A2H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 426.588 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1S,3R,5Z,7E,20S,23S)-1,3-dihydroxy-23,26-epoxy-9,10-secocholesta-5,7,10,25(27)-tetraen-26-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.13 _cell.angle_gamma 90 _cell.entry_id 3A2H _cell.length_a 124.809 _cell.length_b 45.349 _cell.length_c 46.662 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3A2H _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,C,D 2 1 B,E 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H38 O4' _chem_comp.formula_weight 426.588 _chem_comp.id TEJ _chem_comp.mon_nstd_flag . _chem_comp.name (1S,3R,5Z,7E,20S,23S)-1,3-dihydroxy-23,26-epoxy-9,10-secocholesta-5,7,10,25(27)-tetraen-26-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(23S)-25-dehydro-1alpha-hydroxyvitamin D3-26,23-lactone' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O21 C17 TEJ doub 290 n n C17 O16 TEJ sing 291 n n C18 C17 TEJ sing 292 n n C18 C19 TEJ sing 293 n n C20 C18 TEJ doub 294 n n C19 C15 TEJ sing 295 n n O16 C15 TEJ sing 296 n n C12 C15 TEJ sing 297 n n C12 C10 TEJ sing 298 n n C10 C11 TEJ sing 299 n n C7 C10 TEJ sing 300 n n C8 C7 TEJ sing 301 n n C9 C8 TEJ sing 302 n n C9 C5 TEJ sing 303 n n C6 C7 TEJ sing 304 n n C6 C5 TEJ sing 305 n n C6 C1 TEJ sing 306 n n C22 C6 TEJ sing 307 n n C4 C5 TEJ sing 308 n n C4 C3 TEJ sing 309 n n C3 C2 TEJ sing 310 n n C2 C1 TEJ sing 311 n n C23 C4 TEJ doub 312 n n C24 C23 TEJ sing 313 n n C25 C24 TEJ doub 314 n n C26 C25 TEJ sing 315 n n C27 C26 TEJ sing 316 n n C27 O34 TEJ sing 317 n n C73 C27 TEJ sing 318 n n C73 C29 TEJ sing 319 n n C29 C30 TEJ sing 320 n n O32 C29 TEJ sing 321 n n C30 C25 TEJ sing 322 n n C31 C30 TEJ doub 323 n n C31 H31 TEJ sing 324 n n C20 H20 TEJ sing 325 n n C20 H20A TEJ sing 326 n n C19 H19 TEJ sing 327 n n C19 H51 TEJ sing 328 n n C15 H15 TEJ sing 329 n n C12 H12 TEJ sing 330 n n C12 H12A TEJ sing 331 n n C10 H10 TEJ sing 332 n n C11 H11 TEJ sing 333 n n C11 H11A TEJ sing 334 n n C11 H11B TEJ sing 335 n n C7 H7 TEJ sing 336 n n C8 H8 TEJ sing 337 n n C8 H8A TEJ sing 338 e n C9 H9 TEJ sing 339 n n C9 H9A TEJ sing 340 n n C5 H5 TEJ sing 341 n n C22 H22 TEJ sing 342 z n C22 H22A TEJ sing 343 n n C22 H22B TEJ sing 344 n n C3 H3 TEJ sing 345 n n C3 H3A TEJ sing 346 n n C2 H2 TEJ sing 347 n n C2 H2A TEJ sing 348 n n C1 H1 TEJ sing 349 n n C1 H1A TEJ sing 350 n n C23 H23 TEJ sing 351 n n C24 H24 TEJ sing 352 n n C26 H26 TEJ sing 353 n n C26 H26A TEJ sing 354 n n C27 H27 TEJ sing 355 n n O34 HO34 TEJ sing 356 n n C73 H73 TEJ sing 357 n n C73 H73A TEJ sing 358 n n C29 H29 TEJ sing 359 n n O32 HO32 TEJ sing 360 n n C31 H31A TEJ sing 361 n n # _atom_sites.entry_id 3A2H _atom_sites.fract_transf_matrix[1][1] 0.008012 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001431 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022051 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02177 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TEJ A 1 1 1 TEJ MOL . D 4 HOH A 1 2 2 HOH HOH . D 4 HOH A 2 3 3 HOH HOH . D 4 HOH A 3 4 4 HOH HOH . D 4 HOH A 4 6 6 HOH HOH . D 4 HOH A 5 7 7 HOH HOH . D 4 HOH A 6 8 8 HOH HOH . D 4 HOH A 7 9 9 HOH HOH . D 4 HOH A 8 10 10 HOH HOH . D 4 HOH A 9 11 11 HOH HOH . D 4 HOH A 10 12 12 HOH HOH . D 4 HOH A 11 13 13 HOH HOH . D 4 HOH A 12 14 14 HOH HOH . D 4 HOH A 13 15 15 HOH HOH . D 4 HOH A 14 16 16 HOH HOH . D 4 HOH A 15 17 17 HOH HOH . D 4 HOH A 16 18 18 HOH HOH . D 4 HOH A 17 19 19 HOH HOH . D 4 HOH A 18 20 20 HOH HOH . D 4 HOH A 19 21 21 HOH HOH . D 4 HOH A 20 22 22 HOH HOH . D 4 HOH A 21 23 23 HOH HOH . D 4 HOH A 22 24 24 HOH HOH . D 4 HOH A 23 25 25 HOH HOH . D 4 HOH A 24 26 26 HOH HOH . D 4 HOH A 25 27 27 HOH HOH . D 4 HOH A 26 28 28 HOH HOH . D 4 HOH A 27 29 29 HOH HOH . D 4 HOH A 28 30 30 HOH HOH . D 4 HOH A 29 31 31 HOH HOH . D 4 HOH A 30 32 32 HOH HOH . D 4 HOH A 31 33 33 HOH HOH . D 4 HOH A 32 34 34 HOH HOH . D 4 HOH A 33 35 35 HOH HOH . D 4 HOH A 34 36 36 HOH HOH . D 4 HOH A 35 37 37 HOH HOH . D 4 HOH A 36 38 38 HOH HOH . D 4 HOH A 37 39 39 HOH HOH . D 4 HOH A 38 40 40 HOH HOH . D 4 HOH A 39 41 41 HOH HOH . D 4 HOH A 40 42 42 HOH HOH . D 4 HOH A 41 43 43 HOH HOH . D 4 HOH A 42 44 44 HOH HOH . D 4 HOH A 43 45 45 HOH HOH . D 4 HOH A 44 46 46 HOH HOH . D 4 HOH A 45 424 1 HOH HOH . E 4 HOH B 1 5 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O21 TEJ . . . C 3 5.766 -0.982 11.5 1 28.77 ? O21 TEJ 1 A 1 HETATM 2 C C17 TEJ . . . C 3 5.84 0.121 12.033 1 28.85 ? C17 TEJ 1 A 1 HETATM 3 C C18 TEJ . . . C 3 5.049 1.186 11.816 1 29.04 ? C18 TEJ 1 A 1 HETATM 4 C C20 TEJ . . . C 3 4.04 1.28 10.954 1 28.43 ? C20 TEJ 1 A 1 HETATM 5 C C19 TEJ . . . C 3 5.462 2.333 12.704 1 28.57 ? C19 TEJ 1 A 1 HETATM 6 C C15 TEJ . . . C 3 6.588 1.715 13.547 1 27.66 ? C15 TEJ 1 A 1 HETATM 7 O O16 TEJ . . . C 3 6.877 0.404 13.015 1 28.38 ? O16 TEJ 1 A 1 HETATM 8 C C12 TEJ . . . C 3 7.798 2.628 13.46 1 24.91 ? C12 TEJ 1 A 1 HETATM 9 C C10 TEJ . . . C 3 8.623 2.776 14.747 1 23.07 ? C10 TEJ 1 A 1 HETATM 10 C C11 TEJ . . . C 3 7.817 2.989 16.027 1 22.24 ? C11 TEJ 1 A 1 HETATM 11 C C7 TEJ . . . C 3 9.727 3.857 14.696 1 20.71 ? C7 TEJ 1 A 1 HETATM 12 C C8 TEJ . . . C 3 11.106 3.235 14.42 1 19.58 ? C8 TEJ 1 A 1 HETATM 13 C C9 TEJ . . . C 3 11.988 4.387 13.944 1 19.59 ? C9 TEJ 1 A 1 HETATM 14 C C5 TEJ . . . C 3 11.057 5.601 14.058 1 18.21 ? C5 TEJ 1 A 1 HETATM 15 C C6 TEJ . . . C 3 9.647 5.095 13.778 1 18.96 ? C6 TEJ 1 A 1 HETATM 16 C C22 TEJ . . . C 3 9.426 4.772 12.283 1 18.59 ? C22 TEJ 1 A 1 HETATM 17 C C4 TEJ . . . C 3 11.337 6.803 13.205 1 17.88 ? C4 TEJ 1 A 1 HETATM 18 C C3 TEJ . . . C 3 10.408 7.985 13.456 1 17.21 ? C3 TEJ 1 A 1 HETATM 19 C C2 TEJ . . . C 3 8.929 7.545 13.486 1 17.61 ? C2 TEJ 1 A 1 HETATM 20 C C1 TEJ . . . C 3 8.634 6.185 14.166 1 18.77 ? C1 TEJ 1 A 1 HETATM 21 C C23 TEJ . . . C 3 12.321 6.794 12.271 1 17.25 ? C23 TEJ 1 A 1 HETATM 22 C C24 TEJ . . . C 3 12.636 7.936 11.404 1 16.84 ? C24 TEJ 1 A 1 HETATM 23 C C25 TEJ . . . C 3 13.15 7.855 10.161 1 15.44 ? C25 TEJ 1 A 1 HETATM 24 C C26 TEJ . . . C 3 13.427 9.127 9.412 1 14.12 ? C26 TEJ 1 A 1 HETATM 25 C C27 TEJ . . . C 3 14.839 9.088 8.808 1 15.2 ? C27 TEJ 1 A 1 HETATM 26 O O34 TEJ . . . C 3 15.826 9.164 9.836 1 16.03 ? O34 TEJ 1 A 1 HETATM 27 C C73 TEJ . . . C 3 15.108 7.812 8.015 1 15.12 ? C73 TEJ 1 A 1 HETATM 28 C C29 TEJ . . . C 3 14.843 6.53 8.802 1 14.12 ? C29 TEJ 1 A 1 HETATM 29 O O32 TEJ . . . C 3 14.902 5.45 7.868 1 12.33 ? O32 TEJ 1 A 1 HETATM 30 C C30 TEJ . . . C 3 13.493 6.607 9.468 1 16.35 ? C30 TEJ 1 A 1 HETATM 31 C C31 TEJ . . . C 3 12.627 5.598 9.382 1 17.9 ? C31 TEJ 1 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #