data_3A86 # _model_server_result.job_id Y3nniPaAtGmKQFkqLlSgyg _model_server_result.datetime_utc '2024-11-26 11:55:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3a86 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3A86 # _exptl.entry_id 3A86 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3A86 _cell.length_a 53.782 _cell.length_b 56.843 _cell.length_c 66.064 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3A86 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 25 1_555 A SG CYS 137 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 25 A CYS 43 1_555 A SG CYS 41 A CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf3 A SG CYS 109 A CYS 127 1_555 A SG CYS 210 A CYS 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 116 A CYS 134 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf5 A SG CYS 148 A CYS 166 1_555 A SG CYS 162 A CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc1 B CA CA . A CA 1 1_555 A OE1 GLU 52 A GLU 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc2 B CA CA . A CA 1 1_555 A O ASN 54 A ASN 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc3 B CA CA . A CA 1 1_555 A O VAL 57 A VAL 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc4 B CA CA . A CA 1 1_555 A OE2 GLU 62 A GLU 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc5 B CA CA . A CA 1 1_555 H O HOH . A HOH 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc6 B CA CA . A CA 1 1_555 H O HOH . A HOH 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3A86 _atom_sites.fract_transf_matrix[1][1] 0.018594 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017592 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015137 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1 1 CA CA . C 3 GOL A 1 2 2 GOL GOL . D 3 GOL A 1 3 3 GOL GOL . E 3 GOL A 1 4 4 GOL GOL . F 3 GOL A 1 5 5 GOL GOL . G 4 O09 A 1 6 6 O09 O09 . H 5 HOH A 1 7 7 HOH HOH . H 5 HOH A 2 8 8 HOH HOH . H 5 HOH A 3 9 9 HOH HOH . H 5 HOH A 4 10 10 HOH HOH . H 5 HOH A 5 11 11 HOH HOH . H 5 HOH A 6 12 12 HOH HOH . H 5 HOH A 7 13 13 HOH HOH . H 5 HOH A 8 14 14 HOH HOH . H 5 HOH A 9 15 15 HOH HOH . H 5 HOH A 10 16 16 HOH HOH . H 5 HOH A 11 17 17 HOH HOH . H 5 HOH A 12 18 18 HOH HOH . H 5 HOH A 13 242 242 HOH HOH . H 5 HOH A 14 243 243 HOH HOH . H 5 HOH A 15 244 244 HOH HOH . H 5 HOH A 16 245 245 HOH HOH . H 5 HOH A 17 246 246 HOH HOH . H 5 HOH A 18 247 247 HOH HOH . H 5 HOH A 19 248 248 HOH HOH . H 5 HOH A 20 249 249 HOH HOH . H 5 HOH A 21 250 250 HOH HOH . H 5 HOH A 22 251 251 HOH HOH . H 5 HOH A 23 252 252 HOH HOH . H 5 HOH A 24 253 253 HOH HOH . H 5 HOH A 25 254 254 HOH HOH . H 5 HOH A 26 255 255 HOH HOH . H 5 HOH A 27 256 256 HOH HOH . H 5 HOH A 28 257 257 HOH HOH . H 5 HOH A 29 258 258 HOH HOH . H 5 HOH A 30 259 1 HOH HOH . H 5 HOH A 31 260 2 HOH HOH . H 5 HOH A 32 261 3 HOH HOH . H 5 HOH A 33 262 4 HOH HOH . H 5 HOH A 34 263 5 HOH HOH . H 5 HOH A 35 264 6 HOH HOH . H 5 HOH A 36 265 19 HOH HOH . H 5 HOH A 37 266 20 HOH HOH . H 5 HOH A 38 267 21 HOH HOH . H 5 HOH A 39 268 22 HOH HOH . H 5 HOH A 40 269 23 HOH HOH . H 5 HOH A 41 270 24 HOH HOH . H 5 HOH A 42 271 25 HOH HOH . H 5 HOH A 43 272 26 HOH HOH . H 5 HOH A 44 273 27 HOH HOH . H 5 HOH A 45 274 28 HOH HOH . H 5 HOH A 46 275 29 HOH HOH . H 5 HOH A 47 276 30 HOH HOH . H 5 HOH A 48 277 31 HOH HOH . H 5 HOH A 49 278 32 HOH HOH . H 5 HOH A 50 279 33 HOH HOH . H 5 HOH A 51 280 34 HOH HOH . H 5 HOH A 52 281 35 HOH HOH . H 5 HOH A 53 282 36 HOH HOH . H 5 HOH A 54 283 37 HOH HOH . H 5 HOH A 55 284 38 HOH HOH . H 5 HOH A 56 285 39 HOH HOH . H 5 HOH A 57 286 40 HOH HOH . H 5 HOH A 58 287 41 HOH HOH . H 5 HOH A 59 288 42 HOH HOH . H 5 HOH A 60 289 43 HOH HOH . H 5 HOH A 61 290 44 HOH HOH . H 5 HOH A 62 291 45 HOH HOH . H 5 HOH A 63 292 46 HOH HOH . H 5 HOH A 64 293 47 HOH HOH . H 5 HOH A 65 294 48 HOH HOH . H 5 HOH A 66 295 49 HOH HOH . H 5 HOH A 67 296 50 HOH HOH . H 5 HOH A 68 297 51 HOH HOH . H 5 HOH A 69 298 52 HOH HOH . H 5 HOH A 70 299 53 HOH HOH . H 5 HOH A 71 300 54 HOH HOH . H 5 HOH A 72 301 55 HOH HOH . H 5 HOH A 73 302 56 HOH HOH . H 5 HOH A 74 303 57 HOH HOH . H 5 HOH A 75 304 58 HOH HOH . H 5 HOH A 76 305 59 HOH HOH . H 5 HOH A 77 306 60 HOH HOH . H 5 HOH A 78 307 61 HOH HOH . H 5 HOH A 79 308 62 HOH HOH . H 5 HOH A 80 309 63 HOH HOH . H 5 HOH A 81 310 64 HOH HOH . H 5 HOH A 82 311 65 HOH HOH . H 5 HOH A 83 312 66 HOH HOH . H 5 HOH A 84 313 67 HOH HOH . H 5 HOH A 85 314 68 HOH HOH . H 5 HOH A 86 315 69 HOH HOH . H 5 HOH A 87 316 70 HOH HOH . H 5 HOH A 88 317 71 HOH HOH . H 5 HOH A 89 318 72 HOH HOH . H 5 HOH A 90 319 73 HOH HOH . H 5 HOH A 91 320 74 HOH HOH . H 5 HOH A 92 321 75 HOH HOH . H 5 HOH A 93 322 76 HOH HOH . H 5 HOH A 94 323 77 HOH HOH . H 5 HOH A 95 324 78 HOH HOH . H 5 HOH A 96 325 79 HOH HOH . H 5 HOH A 97 326 80 HOH HOH . H 5 HOH A 98 327 81 HOH HOH . H 5 HOH A 99 328 82 HOH HOH . H 5 HOH A 100 329 83 HOH HOH . H 5 HOH A 101 330 84 HOH HOH . H 5 HOH A 102 331 85 HOH HOH . H 5 HOH A 103 332 86 HOH HOH . H 5 HOH A 104 333 87 HOH HOH . H 5 HOH A 105 334 88 HOH HOH . H 5 HOH A 106 335 89 HOH HOH . H 5 HOH A 107 336 90 HOH HOH . H 5 HOH A 108 337 91 HOH HOH . H 5 HOH A 109 338 92 HOH HOH . H 5 HOH A 110 339 93 HOH HOH . H 5 HOH A 111 340 94 HOH HOH . H 5 HOH A 112 341 95 HOH HOH . H 5 HOH A 113 342 96 HOH HOH . H 5 HOH A 114 343 97 HOH HOH . H 5 HOH A 115 344 98 HOH HOH . H 5 HOH A 116 345 99 HOH HOH . H 5 HOH A 117 346 100 HOH HOH . H 5 HOH A 118 347 101 HOH HOH . H 5 HOH A 119 348 102 HOH HOH . H 5 HOH A 120 349 103 HOH HOH . H 5 HOH A 121 350 104 HOH HOH . H 5 HOH A 122 351 105 HOH HOH . H 5 HOH A 123 352 106 HOH HOH . H 5 HOH A 124 353 107 HOH HOH . H 5 HOH A 125 354 108 HOH HOH . H 5 HOH A 126 355 109 HOH HOH . H 5 HOH A 127 356 110 HOH HOH . H 5 HOH A 128 357 111 HOH HOH . H 5 HOH A 129 358 112 HOH HOH . H 5 HOH A 130 359 113 HOH HOH . H 5 HOH A 131 360 114 HOH HOH . H 5 HOH A 132 361 115 HOH HOH . H 5 HOH A 133 362 116 HOH HOH . H 5 HOH A 134 363 117 HOH HOH . H 5 HOH A 135 364 118 HOH HOH . H 5 HOH A 136 365 119 HOH HOH . H 5 HOH A 137 366 120 HOH HOH . H 5 HOH A 138 367 121 HOH HOH . H 5 HOH A 139 368 122 HOH HOH . H 5 HOH A 140 369 123 HOH HOH . H 5 HOH A 141 370 124 HOH HOH . H 5 HOH A 142 371 125 HOH HOH . H 5 HOH A 143 372 126 HOH HOH . H 5 HOH A 144 373 127 HOH HOH . H 5 HOH A 145 374 128 HOH HOH . H 5 HOH A 146 375 129 HOH HOH . H 5 HOH A 147 376 130 HOH HOH . H 5 HOH A 148 377 131 HOH HOH . H 5 HOH A 149 378 132 HOH HOH . H 5 HOH A 150 379 133 HOH HOH . H 5 HOH A 151 380 134 HOH HOH . H 5 HOH A 152 381 135 HOH HOH . H 5 HOH A 153 382 136 HOH HOH . H 5 HOH A 154 383 137 HOH HOH . H 5 HOH A 155 384 138 HOH HOH . H 5 HOH A 156 385 139 HOH HOH . H 5 HOH A 157 386 140 HOH HOH . H 5 HOH A 158 387 141 HOH HOH . H 5 HOH A 159 388 142 HOH HOH . H 5 HOH A 160 389 143 HOH HOH . H 5 HOH A 161 390 144 HOH HOH . H 5 HOH A 162 391 145 HOH HOH . H 5 HOH A 163 392 146 HOH HOH . H 5 HOH A 164 393 147 HOH HOH . H 5 HOH A 165 394 148 HOH HOH . H 5 HOH A 166 395 149 HOH HOH . H 5 HOH A 167 396 150 HOH HOH . H 5 HOH A 168 397 151 HOH HOH . H 5 HOH A 169 398 152 HOH HOH . H 5 HOH A 170 399 153 HOH HOH . H 5 HOH A 171 400 154 HOH HOH . H 5 HOH A 172 401 155 HOH HOH . H 5 HOH A 173 402 156 HOH HOH . H 5 HOH A 174 403 157 HOH HOH . H 5 HOH A 175 404 158 HOH HOH . H 5 HOH A 176 405 159 HOH HOH . H 5 HOH A 177 406 160 HOH HOH . H 5 HOH A 178 407 161 HOH HOH . H 5 HOH A 179 408 162 HOH HOH . H 5 HOH A 180 409 163 HOH HOH . H 5 HOH A 181 410 164 HOH HOH . H 5 HOH A 182 411 165 HOH HOH . H 5 HOH A 183 412 166 HOH HOH . H 5 HOH A 184 413 167 HOH HOH . H 5 HOH A 185 414 168 HOH HOH . H 5 HOH A 186 415 169 HOH HOH . H 5 HOH A 187 416 170 HOH HOH . H 5 HOH A 188 417 171 HOH HOH . H 5 HOH A 189 418 172 HOH HOH . H 5 HOH A 190 419 173 HOH HOH . H 5 HOH A 191 420 174 HOH HOH . H 5 HOH A 192 421 175 HOH HOH . H 5 HOH A 193 422 176 HOH HOH . H 5 HOH A 194 423 178 HOH HOH . H 5 HOH A 195 424 179 HOH HOH . H 5 HOH A 196 425 181 HOH HOH . H 5 HOH A 197 426 182 HOH HOH . H 5 HOH A 198 427 183 HOH HOH . H 5 HOH A 199 428 184 HOH HOH . H 5 HOH A 200 429 185 HOH HOH . H 5 HOH A 201 430 186 HOH HOH . H 5 HOH A 202 431 187 HOH HOH . H 5 HOH A 203 432 188 HOH HOH . H 5 HOH A 204 433 189 HOH HOH . H 5 HOH A 205 434 190 HOH HOH . H 5 HOH A 206 435 191 HOH HOH . H 5 HOH A 207 436 192 HOH HOH . H 5 HOH A 208 437 193 HOH HOH . H 5 HOH A 209 438 194 HOH HOH . H 5 HOH A 210 439 195 HOH HOH . H 5 HOH A 211 440 196 HOH HOH . H 5 HOH A 212 441 197 HOH HOH . H 5 HOH A 213 442 198 HOH HOH . H 5 HOH A 214 443 200 HOH HOH . H 5 HOH A 215 444 201 HOH HOH . H 5 HOH A 216 445 202 HOH HOH . H 5 HOH A 217 446 203 HOH HOH . H 5 HOH A 218 447 204 HOH HOH . H 5 HOH A 219 448 205 HOH HOH . H 5 HOH A 220 449 206 HOH HOH . H 5 HOH A 221 450 207 HOH HOH . H 5 HOH A 222 451 208 HOH HOH . H 5 HOH A 223 452 209 HOH HOH . H 5 HOH A 224 453 210 HOH HOH . H 5 HOH A 225 454 211 HOH HOH . H 5 HOH A 226 455 212 HOH HOH . H 5 HOH A 227 456 213 HOH HOH . H 5 HOH A 228 457 214 HOH HOH . H 5 HOH A 229 458 215 HOH HOH . H 5 HOH A 230 459 216 HOH HOH . H 5 HOH A 231 460 217 HOH HOH . H 5 HOH A 232 461 218 HOH HOH . H 5 HOH A 233 462 219 HOH HOH . H 5 HOH A 234 463 220 HOH HOH . H 5 HOH A 235 464 221 HOH HOH . H 5 HOH A 236 465 222 HOH HOH . H 5 HOH A 237 466 223 HOH HOH . H 5 HOH A 238 467 224 HOH HOH . H 5 HOH A 239 468 225 HOH HOH . H 5 HOH A 240 469 226 HOH HOH . H 5 HOH A 241 470 227 HOH HOH . H 5 HOH A 242 471 228 HOH HOH . H 5 HOH A 243 472 229 HOH HOH . H 5 HOH A 244 473 230 HOH HOH . H 5 HOH A 245 474 231 HOH HOH . H 5 HOH A 246 475 232 HOH HOH . H 5 HOH A 247 476 233 HOH HOH . H 5 HOH A 248 477 234 HOH HOH . H 5 HOH A 249 478 235 HOH HOH . H 5 HOH A 250 479 236 HOH HOH . H 5 HOH A 251 480 237 HOH HOH . H 5 HOH A 252 481 238 HOH HOH . H 5 HOH A 253 482 239 HOH HOH . H 5 HOH A 254 483 240 HOH HOH . H 5 HOH A 255 484 241 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -10.499 _atom_site.Cartn_y -4.083 _atom_site.Cartn_z -3.522 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #