data_3A8Z
#
_model_server_result.job_id            A-oCFL9gXd2oOzVhQJICgA 
_model_server_result.datetime_utc      '2024-10-19 23:43:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3a8z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":130}' 
#
_entry.id    3A8Z 
#
_exptl.entry_id    3A8Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3A8Z 
_cell.length_a            78.785 
_cell.length_b            78.785 
_cell.length_c            36.961 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3A8Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc1 A O SER 60 A SER 60 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc2 A O CYS 64 A CYS 64 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc3 A OG SER 72 A SER 72 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? 
metalc ? metalc4 A O ARG 73 A ARG 73 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc5 B NA NA . A NA 130 1_555 L O HOH . A HOH 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? 
metalc ? metalc6 B NA NA . A NA 130 1_555 L O HOH . A HOH 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3A8Z 
_atom_sites.fract_transf_matrix[1][1]    0.012693 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012693 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.027056 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 130 1 NA NA . 
C 3 CL A 1 131 2 CL CL . 
D 3 CL A 1 132 3 CL CL . 
E 3 CL A 1 133 4 CL CL . 
F 3 CL A 1 134 5 CL CL . 
G 3 CL A 1 135 6 CL CL . 
H 3 CL A 1 136 7 CL CL . 
I 3 CL A 1 137 8 CL CL . 
J 4 GOL A 1 138 1 GOL GOL . 
K 4 GOL A 1 139 2 GOL GOL . 
L 5 HOH A 1 140 140 HOH HOH . 
L 5 HOH A 2 141 141 HOH HOH . 
L 5 HOH A 3 142 142 HOH HOH . 
L 5 HOH A 4 143 143 HOH HOH . 
L 5 HOH A 5 144 144 HOH HOH . 
L 5 HOH A 6 145 145 HOH HOH . 
L 5 HOH A 7 146 146 HOH HOH . 
L 5 HOH A 8 147 1 HOH HOH . 
L 5 HOH A 9 148 2 HOH HOH . 
L 5 HOH A 10 149 3 HOH HOH . 
L 5 HOH A 11 150 4 HOH HOH . 
L 5 HOH A 12 151 5 HOH HOH . 
L 5 HOH A 13 152 6 HOH HOH . 
L 5 HOH A 14 153 7 HOH HOH . 
L 5 HOH A 15 154 8 HOH HOH . 
L 5 HOH A 16 155 9 HOH HOH . 
L 5 HOH A 17 156 10 HOH HOH . 
L 5 HOH A 18 157 11 HOH HOH . 
L 5 HOH A 19 158 12 HOH HOH . 
L 5 HOH A 20 159 13 HOH HOH . 
L 5 HOH A 21 160 14 HOH HOH . 
L 5 HOH A 22 161 15 HOH HOH . 
L 5 HOH A 23 162 16 HOH HOH . 
L 5 HOH A 24 163 17 HOH HOH . 
L 5 HOH A 25 164 18 HOH HOH . 
L 5 HOH A 26 165 19 HOH HOH . 
L 5 HOH A 27 166 20 HOH HOH . 
L 5 HOH A 28 167 21 HOH HOH . 
L 5 HOH A 29 168 22 HOH HOH . 
L 5 HOH A 30 169 23 HOH HOH . 
L 5 HOH A 31 170 24 HOH HOH . 
L 5 HOH A 32 171 25 HOH HOH . 
L 5 HOH A 33 172 26 HOH HOH . 
L 5 HOH A 34 173 27 HOH HOH . 
L 5 HOH A 35 174 28 HOH HOH . 
L 5 HOH A 36 175 29 HOH HOH . 
L 5 HOH A 37 176 30 HOH HOH . 
L 5 HOH A 38 177 31 HOH HOH . 
L 5 HOH A 39 178 32 HOH HOH . 
L 5 HOH A 40 179 33 HOH HOH . 
L 5 HOH A 41 180 34 HOH HOH . 
L 5 HOH A 42 181 35 HOH HOH . 
L 5 HOH A 43 182 36 HOH HOH . 
L 5 HOH A 44 183 37 HOH HOH . 
L 5 HOH A 45 184 38 HOH HOH . 
L 5 HOH A 46 185 39 HOH HOH . 
L 5 HOH A 47 186 40 HOH HOH . 
L 5 HOH A 48 187 41 HOH HOH . 
L 5 HOH A 49 188 42 HOH HOH . 
L 5 HOH A 50 189 43 HOH HOH . 
L 5 HOH A 51 190 44 HOH HOH . 
L 5 HOH A 52 191 45 HOH HOH . 
L 5 HOH A 53 192 46 HOH HOH . 
L 5 HOH A 54 193 47 HOH HOH . 
L 5 HOH A 55 194 48 HOH HOH . 
L 5 HOH A 56 195 49 HOH HOH . 
L 5 HOH A 57 196 50 HOH HOH . 
L 5 HOH A 58 197 51 HOH HOH . 
L 5 HOH A 59 198 52 HOH HOH . 
L 5 HOH A 60 199 53 HOH HOH . 
L 5 HOH A 61 200 54 HOH HOH . 
L 5 HOH A 62 201 55 HOH HOH . 
L 5 HOH A 63 202 56 HOH HOH . 
L 5 HOH A 64 203 57 HOH HOH . 
L 5 HOH A 65 204 58 HOH HOH . 
L 5 HOH A 66 205 59 HOH HOH . 
L 5 HOH A 67 206 60 HOH HOH . 
L 5 HOH A 68 207 61 HOH HOH . 
L 5 HOH A 69 208 62 HOH HOH . 
L 5 HOH A 70 209 63 HOH HOH . 
L 5 HOH A 71 210 64 HOH HOH . 
L 5 HOH A 72 211 65 HOH HOH . 
L 5 HOH A 73 212 66 HOH HOH . 
L 5 HOH A 74 213 67 HOH HOH . 
L 5 HOH A 75 214 68 HOH HOH . 
L 5 HOH A 76 215 69 HOH HOH . 
L 5 HOH A 77 216 70 HOH HOH . 
L 5 HOH A 78 217 71 HOH HOH . 
L 5 HOH A 79 218 72 HOH HOH . 
L 5 HOH A 80 219 73 HOH HOH . 
L 5 HOH A 81 220 74 HOH HOH . 
L 5 HOH A 82 221 75 HOH HOH . 
L 5 HOH A 83 222 76 HOH HOH . 
L 5 HOH A 84 223 77 HOH HOH . 
L 5 HOH A 85 224 78 HOH HOH . 
L 5 HOH A 86 225 79 HOH HOH . 
L 5 HOH A 87 226 80 HOH HOH . 
L 5 HOH A 88 227 81 HOH HOH . 
L 5 HOH A 89 228 82 HOH HOH . 
L 5 HOH A 90 229 83 HOH HOH . 
L 5 HOH A 91 230 84 HOH HOH . 
L 5 HOH A 92 231 85 HOH HOH . 
L 5 HOH A 93 232 86 HOH HOH . 
L 5 HOH A 94 233 87 HOH HOH . 
L 5 HOH A 95 234 88 HOH HOH . 
L 5 HOH A 96 235 89 HOH HOH . 
L 5 HOH A 97 236 90 HOH HOH . 
L 5 HOH A 98 237 91 HOH HOH . 
L 5 HOH A 99 238 92 HOH HOH . 
L 5 HOH A 100 239 93 HOH HOH . 
L 5 HOH A 101 240 94 HOH HOH . 
L 5 HOH A 102 241 95 HOH HOH . 
L 5 HOH A 103 242 96 HOH HOH . 
L 5 HOH A 104 243 97 HOH HOH . 
L 5 HOH A 105 244 98 HOH HOH . 
L 5 HOH A 106 245 99 HOH HOH . 
L 5 HOH A 107 246 100 HOH HOH . 
L 5 HOH A 108 247 101 HOH HOH . 
L 5 HOH A 109 248 102 HOH HOH . 
L 5 HOH A 110 249 103 HOH HOH . 
L 5 HOH A 111 250 104 HOH HOH . 
L 5 HOH A 112 251 105 HOH HOH . 
L 5 HOH A 113 252 106 HOH HOH . 
L 5 HOH A 114 253 107 HOH HOH . 
L 5 HOH A 115 254 108 HOH HOH . 
L 5 HOH A 116 255 109 HOH HOH . 
L 5 HOH A 117 256 110 HOH HOH . 
L 5 HOH A 118 257 111 HOH HOH . 
L 5 HOH A 119 258 112 HOH HOH . 
L 5 HOH A 120 259 113 HOH HOH . 
L 5 HOH A 121 260 114 HOH HOH . 
L 5 HOH A 122 261 115 HOH HOH . 
L 5 HOH A 123 262 116 HOH HOH . 
L 5 HOH A 124 263 117 HOH HOH . 
L 5 HOH A 125 264 118 HOH HOH . 
L 5 HOH A 126 265 119 HOH HOH . 
L 5 HOH A 127 266 120 HOH HOH . 
L 5 HOH A 128 267 121 HOH HOH . 
L 5 HOH A 129 268 122 HOH HOH . 
L 5 HOH A 130 269 123 HOH HOH . 
L 5 HOH A 131 270 124 HOH HOH . 
L 5 HOH A 132 271 125 HOH HOH . 
L 5 HOH A 133 272 126 HOH HOH . 
L 5 HOH A 134 273 127 HOH HOH . 
L 5 HOH A 135 274 128 HOH HOH . 
L 5 HOH A 136 275 129 HOH HOH . 
L 5 HOH A 137 276 130 HOH HOH . 
L 5 HOH A 138 277 131 HOH HOH . 
L 5 HOH A 139 278 132 HOH HOH . 
L 5 HOH A 140 279 133 HOH HOH . 
L 5 HOH A 141 280 134 HOH HOH . 
L 5 HOH A 142 281 135 HOH HOH . 
L 5 HOH A 143 282 136 HOH HOH . 
L 5 HOH A 144 283 137 HOH HOH . 
L 5 HOH A 145 284 138 HOH HOH . 
L 5 HOH A 146 285 139 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               14.128 
_atom_site.Cartn_y               7.894 
_atom_site.Cartn_z               -12.77 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        12.64 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           130 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#