data_3A90 # _model_server_result.job_id tz0Wr7Nh9jbhe2yAwoQ-yg _model_server_result.datetime_utc '2024-11-01 01:26:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3a90 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":130}' # _entry.id 3A90 # _exptl.entry_id 3A90 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3A90 _cell.length_a 78.743 _cell.length_b 78.743 _cell.length_c 37.048 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3A90 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc1 A O SER 60 A SER 60 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc2 A O CYS 64 A CYS 64 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc3 A OG SER 72 A SER 72 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc4 A O ARG 73 A ARG 73 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc5 B NA NA . A NA 130 1_555 L O HOH . A HOH 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc6 B NA NA . A NA 130 1_555 L O HOH . A HOH 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3A90 _atom_sites.fract_transf_matrix[1][1] 0.0127 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0127 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026992 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 130 1 NA NA . C 3 CL A 1 131 1 CL CL . D 3 CL A 1 132 2 CL CL . E 3 CL A 1 133 3 CL CL . F 3 CL A 1 134 4 CL CL . G 3 CL A 1 135 5 CL CL . H 3 CL A 1 136 6 CL CL . I 3 CL A 1 137 7 CL CL . J 4 GOL A 1 138 1 GOL GOL . K 4 GOL A 1 139 2 GOL GOL . L 5 HOH A 1 140 1 HOH HOH . L 5 HOH A 2 141 2 HOH HOH . L 5 HOH A 3 142 3 HOH HOH . L 5 HOH A 4 143 4 HOH HOH . L 5 HOH A 5 144 5 HOH HOH . L 5 HOH A 6 145 6 HOH HOH . L 5 HOH A 7 146 7 HOH HOH . L 5 HOH A 8 147 8 HOH HOH . L 5 HOH A 9 148 9 HOH HOH . L 5 HOH A 10 149 10 HOH HOH . L 5 HOH A 11 150 11 HOH HOH . L 5 HOH A 12 151 12 HOH HOH . L 5 HOH A 13 152 13 HOH HOH . L 5 HOH A 14 153 14 HOH HOH . L 5 HOH A 15 154 15 HOH HOH . L 5 HOH A 16 155 16 HOH HOH . L 5 HOH A 17 156 17 HOH HOH . L 5 HOH A 18 157 18 HOH HOH . L 5 HOH A 19 158 19 HOH HOH . L 5 HOH A 20 159 20 HOH HOH . L 5 HOH A 21 160 21 HOH HOH . L 5 HOH A 22 161 22 HOH HOH . L 5 HOH A 23 162 23 HOH HOH . L 5 HOH A 24 163 24 HOH HOH . L 5 HOH A 25 164 25 HOH HOH . L 5 HOH A 26 165 26 HOH HOH . L 5 HOH A 27 166 27 HOH HOH . L 5 HOH A 28 167 28 HOH HOH . L 5 HOH A 29 168 29 HOH HOH . L 5 HOH A 30 169 30 HOH HOH . L 5 HOH A 31 170 31 HOH HOH . L 5 HOH A 32 171 32 HOH HOH . L 5 HOH A 33 172 33 HOH HOH . L 5 HOH A 34 173 34 HOH HOH . L 5 HOH A 35 174 35 HOH HOH . L 5 HOH A 36 175 36 HOH HOH . L 5 HOH A 37 176 37 HOH HOH . L 5 HOH A 38 177 38 HOH HOH . L 5 HOH A 39 178 39 HOH HOH . L 5 HOH A 40 179 40 HOH HOH . L 5 HOH A 41 180 41 HOH HOH . L 5 HOH A 42 181 42 HOH HOH . L 5 HOH A 43 182 43 HOH HOH . L 5 HOH A 44 183 44 HOH HOH . L 5 HOH A 45 184 45 HOH HOH . L 5 HOH A 46 185 46 HOH HOH . L 5 HOH A 47 186 47 HOH HOH . L 5 HOH A 48 187 48 HOH HOH . L 5 HOH A 49 188 49 HOH HOH . L 5 HOH A 50 189 50 HOH HOH . L 5 HOH A 51 190 51 HOH HOH . L 5 HOH A 52 191 52 HOH HOH . L 5 HOH A 53 192 53 HOH HOH . L 5 HOH A 54 193 54 HOH HOH . L 5 HOH A 55 194 55 HOH HOH . L 5 HOH A 56 195 56 HOH HOH . L 5 HOH A 57 196 57 HOH HOH . L 5 HOH A 58 197 58 HOH HOH . L 5 HOH A 59 198 59 HOH HOH . L 5 HOH A 60 199 60 HOH HOH . L 5 HOH A 61 200 61 HOH HOH . L 5 HOH A 62 201 62 HOH HOH . L 5 HOH A 63 202 63 HOH HOH . L 5 HOH A 64 203 64 HOH HOH . L 5 HOH A 65 204 65 HOH HOH . L 5 HOH A 66 205 66 HOH HOH . L 5 HOH A 67 206 67 HOH HOH . L 5 HOH A 68 207 68 HOH HOH . L 5 HOH A 69 208 69 HOH HOH . L 5 HOH A 70 209 70 HOH HOH . L 5 HOH A 71 210 71 HOH HOH . L 5 HOH A 72 211 72 HOH HOH . L 5 HOH A 73 212 73 HOH HOH . L 5 HOH A 74 213 74 HOH HOH . L 5 HOH A 75 214 75 HOH HOH . L 5 HOH A 76 215 76 HOH HOH . L 5 HOH A 77 216 77 HOH HOH . L 5 HOH A 78 217 78 HOH HOH . L 5 HOH A 79 218 79 HOH HOH . L 5 HOH A 80 219 80 HOH HOH . L 5 HOH A 81 220 81 HOH HOH . L 5 HOH A 82 221 82 HOH HOH . L 5 HOH A 83 222 83 HOH HOH . L 5 HOH A 84 223 84 HOH HOH . L 5 HOH A 85 224 85 HOH HOH . L 5 HOH A 86 225 86 HOH HOH . L 5 HOH A 87 226 87 HOH HOH . L 5 HOH A 88 227 88 HOH HOH . L 5 HOH A 89 228 89 HOH HOH . L 5 HOH A 90 229 90 HOH HOH . L 5 HOH A 91 230 91 HOH HOH . L 5 HOH A 92 231 92 HOH HOH . L 5 HOH A 93 232 93 HOH HOH . L 5 HOH A 94 233 94 HOH HOH . L 5 HOH A 95 234 95 HOH HOH . L 5 HOH A 96 235 96 HOH HOH . L 5 HOH A 97 236 97 HOH HOH . L 5 HOH A 98 237 98 HOH HOH . L 5 HOH A 99 238 99 HOH HOH . L 5 HOH A 100 239 100 HOH HOH . L 5 HOH A 101 240 101 HOH HOH . L 5 HOH A 102 241 102 HOH HOH . L 5 HOH A 103 242 103 HOH HOH . L 5 HOH A 104 243 104 HOH HOH . L 5 HOH A 105 244 105 HOH HOH . L 5 HOH A 106 245 106 HOH HOH . L 5 HOH A 107 246 107 HOH HOH . L 5 HOH A 108 247 108 HOH HOH . L 5 HOH A 109 248 109 HOH HOH . L 5 HOH A 110 249 110 HOH HOH . L 5 HOH A 111 250 111 HOH HOH . L 5 HOH A 112 251 112 HOH HOH . L 5 HOH A 113 252 113 HOH HOH . L 5 HOH A 114 253 114 HOH HOH . L 5 HOH A 115 254 115 HOH HOH . L 5 HOH A 116 255 116 HOH HOH . L 5 HOH A 117 256 117 HOH HOH . L 5 HOH A 118 257 118 HOH HOH . L 5 HOH A 119 258 119 HOH HOH . L 5 HOH A 120 259 120 HOH HOH . L 5 HOH A 121 260 121 HOH HOH . L 5 HOH A 122 261 122 HOH HOH . L 5 HOH A 123 262 123 HOH HOH . L 5 HOH A 124 263 124 HOH HOH . L 5 HOH A 125 264 125 HOH HOH . L 5 HOH A 126 265 126 HOH HOH . L 5 HOH A 127 266 127 HOH HOH . L 5 HOH A 128 267 128 HOH HOH . L 5 HOH A 129 268 129 HOH HOH . L 5 HOH A 130 269 130 HOH HOH . L 5 HOH A 131 270 131 HOH HOH . L 5 HOH A 132 271 132 HOH HOH . L 5 HOH A 133 272 133 HOH HOH . L 5 HOH A 134 273 134 HOH HOH . L 5 HOH A 135 274 135 HOH HOH . L 5 HOH A 136 275 136 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -14.084 _atom_site.Cartn_y 7.909 _atom_site.Cartn_z 3.571 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.01 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 130 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #