data_3A96 # _model_server_result.job_id YVDnDfUn3n3Lz5wmjWklfQ _model_server_result.datetime_utc '2024-10-12 15:23:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3a96 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":138}' # _entry.id 3A96 # _exptl.entry_id 3A96 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 102.906 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'RHODIUM(III) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3A96 _cell.length_a 77.967 _cell.length_b 77.967 _cell.length_c 37.14 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3A96 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc1 A NH1 ARG 14 A ARG 14 1_555 I RH RH3 . A RH3 137 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc2 A OD2 ASP 18 A ASP 18 1_555 H RH RH3 . A RH3 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc3 A O SER 60 A SER 60 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc4 A O CYS 64 A CYS 64 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc5 A OG SER 72 A SER 72 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc6 A O ARG 73 A ARG 73 1_555 B NA NA . A NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc7 B NA NA . A NA 130 1_555 K O HOH . A HOH 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc8 B NA NA . A NA 130 1_555 K O HOH . A HOH 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc9 G RH RH3 . A RH3 135 1_555 K O HOH . A HOH 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc10 G RH RH3 . A RH3 135 1_555 K O HOH . A HOH 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc11 G RH RH3 . A RH3 135 1_555 K O HOH . A HOH 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc12 G RH RH3 . A RH3 135 1_555 K O HOH . A HOH 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc13 G RH RH3 . A RH3 135 1_555 K O HOH . A HOH 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc14 H RH RH3 . A RH3 136 1_555 K O HOH . A HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc15 H RH RH3 . A RH3 136 1_555 K O HOH . A HOH 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc16 H RH RH3 . A RH3 136 1_555 K O HOH . A HOH 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc17 H RH RH3 . A RH3 136 1_555 K O HOH . A HOH 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc18 I RH RH3 . A RH3 137 1_555 K O HOH . A HOH 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? metalc ? metalc19 J RH RH3 . A RH3 138 1_555 K O HOH . A HOH 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc20 J RH RH3 . A RH3 138 1_555 K O HOH . A HOH 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc21 J RH RH3 . A RH3 138 1_555 K O HOH . A HOH 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc22 J RH RH3 . A RH3 138 1_555 K O HOH . A HOH 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? # _chem_comp.formula 'Rh 3' _chem_comp.formula_weight 102.906 _chem_comp.id RH3 _chem_comp.mon_nstd_flag . _chem_comp.name 'RHODIUM(III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3A96 _atom_sites.fract_transf_matrix[1][1] 0.012826 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012826 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026925 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 130 1 NA NA . C 3 CL A 1 131 1 CL CL . D 3 CL A 1 132 2 CL CL . E 3 CL A 1 133 3 CL CL . F 3 CL A 1 134 4 CL CL . G 4 RH3 A 1 135 1 RH3 RH3 . H 4 RH3 A 1 136 2 RH3 RH3 . I 4 RH3 A 1 137 3 RH3 RH3 . J 4 RH3 A 1 138 4 RH3 RH3 . K 5 HOH A 1 139 1 HOH HOH . K 5 HOH A 2 140 2 HOH HOH . K 5 HOH A 3 141 3 HOH HOH . K 5 HOH A 4 142 4 HOH HOH . K 5 HOH A 5 143 5 HOH HOH . K 5 HOH A 6 144 6 HOH HOH . K 5 HOH A 7 145 7 HOH HOH . K 5 HOH A 8 146 8 HOH HOH . K 5 HOH A 9 147 9 HOH HOH . K 5 HOH A 10 148 10 HOH HOH . K 5 HOH A 11 149 11 HOH HOH . K 5 HOH A 12 150 12 HOH HOH . K 5 HOH A 13 151 13 HOH HOH . K 5 HOH A 14 152 14 HOH HOH . K 5 HOH A 15 153 15 HOH HOH . K 5 HOH A 16 154 16 HOH HOH . K 5 HOH A 17 155 17 HOH HOH . K 5 HOH A 18 156 18 HOH HOH . K 5 HOH A 19 157 19 HOH HOH . K 5 HOH A 20 158 20 HOH HOH . K 5 HOH A 21 159 21 HOH HOH . K 5 HOH A 22 160 22 HOH HOH . K 5 HOH A 23 161 23 HOH HOH . K 5 HOH A 24 162 24 HOH HOH . K 5 HOH A 25 163 25 HOH HOH . K 5 HOH A 26 164 26 HOH HOH . K 5 HOH A 27 165 27 HOH HOH . K 5 HOH A 28 166 28 HOH HOH . K 5 HOH A 29 167 29 HOH HOH . K 5 HOH A 30 168 30 HOH HOH . K 5 HOH A 31 169 31 HOH HOH . K 5 HOH A 32 170 32 HOH HOH . K 5 HOH A 33 171 33 HOH HOH . K 5 HOH A 34 172 34 HOH HOH . K 5 HOH A 35 173 35 HOH HOH . K 5 HOH A 36 174 36 HOH HOH . K 5 HOH A 37 175 37 HOH HOH . K 5 HOH A 38 176 38 HOH HOH . K 5 HOH A 39 177 39 HOH HOH . K 5 HOH A 40 178 40 HOH HOH . K 5 HOH A 41 179 41 HOH HOH . K 5 HOH A 42 180 42 HOH HOH . K 5 HOH A 43 181 43 HOH HOH . K 5 HOH A 44 182 44 HOH HOH . K 5 HOH A 45 183 45 HOH HOH . K 5 HOH A 46 184 46 HOH HOH . K 5 HOH A 47 185 47 HOH HOH . K 5 HOH A 48 186 48 HOH HOH . K 5 HOH A 49 187 49 HOH HOH . K 5 HOH A 50 188 50 HOH HOH . K 5 HOH A 51 189 51 HOH HOH . K 5 HOH A 52 190 52 HOH HOH . K 5 HOH A 53 191 53 HOH HOH . K 5 HOH A 54 192 54 HOH HOH . K 5 HOH A 55 193 55 HOH HOH . K 5 HOH A 56 194 56 HOH HOH . K 5 HOH A 57 195 57 HOH HOH . K 5 HOH A 58 196 58 HOH HOH . K 5 HOH A 59 197 59 HOH HOH . K 5 HOH A 60 198 60 HOH HOH . K 5 HOH A 61 199 61 HOH HOH . K 5 HOH A 62 200 62 HOH HOH . K 5 HOH A 63 201 63 HOH HOH . K 5 HOH A 64 202 64 HOH HOH . K 5 HOH A 65 203 65 HOH HOH . K 5 HOH A 66 204 66 HOH HOH . K 5 HOH A 67 205 67 HOH HOH . K 5 HOH A 68 206 68 HOH HOH . K 5 HOH A 69 207 69 HOH HOH . K 5 HOH A 70 208 70 HOH HOH . K 5 HOH A 71 209 71 HOH HOH . K 5 HOH A 72 210 72 HOH HOH . K 5 HOH A 73 211 73 HOH HOH . K 5 HOH A 74 212 74 HOH HOH . K 5 HOH A 75 213 75 HOH HOH . K 5 HOH A 76 214 76 HOH HOH . K 5 HOH A 77 215 77 HOH HOH . K 5 HOH A 78 216 78 HOH HOH . K 5 HOH A 79 217 79 HOH HOH . K 5 HOH A 80 218 80 HOH HOH . K 5 HOH A 81 219 81 HOH HOH . K 5 HOH A 82 220 82 HOH HOH . K 5 HOH A 83 221 83 HOH HOH . K 5 HOH A 84 222 84 HOH HOH . K 5 HOH A 85 223 85 HOH HOH . K 5 HOH A 86 224 86 HOH HOH . K 5 HOH A 87 225 87 HOH HOH . K 5 HOH A 88 226 88 HOH HOH . K 5 HOH A 89 227 89 HOH HOH . K 5 HOH A 90 228 90 HOH HOH . K 5 HOH A 91 229 91 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol RH _atom_site.label_atom_id RH _atom_site.label_comp_id RH3 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 4 _atom_site.Cartn_x -3.236 _atom_site.Cartn_y 5.639 _atom_site.Cartn_z 2.251 _atom_site.occupancy 0.4 _atom_site.B_iso_or_equiv 35.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id RH _atom_site.auth_comp_id RH3 _atom_site.auth_seq_id 138 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #