data_3A9E
#
_model_server_result.job_id            lPWpt3H6xYYghtJVhnWFrA 
_model_server_result.datetime_utc      '2024-10-24 12:22:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3a9e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1}' 
#
_entry.id    3A9E 
#
_exptl.entry_id    3A9E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              300.435 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'RETINOIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3A9E 
_cell.length_a            105.3 
_cell.length_b            105.3 
_cell.length_c            111.338 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3A9E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
PISA hexameric 6 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H 1 1 
A,B,C,D,E,F,G,H 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H28 O2' 
_chem_comp.formula_weight    300.435 
_chem_comp.id                REA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'RETINOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 REA sing 343 n n 
C1 C6 REA sing 344 n n 
C1 C16 REA sing 345 n n 
C1 C17 REA sing 346 n n 
C2 C3 REA sing 347 n n 
C2 H21 REA sing 348 n n 
C2 H22 REA sing 349 n n 
C3 C4 REA sing 350 n n 
C3 H31 REA sing 351 n n 
C3 H32 REA sing 352 n n 
C4 C5 REA sing 353 n n 
C4 H41 REA sing 354 n n 
C4 H42 REA sing 355 n n 
C5 C6 REA doub 356 n n 
C5 C18 REA sing 357 n n 
C6 C7 REA sing 358 n n 
C7 C8 REA doub 359 e n 
C7 H7 REA sing 360 n n 
C8 C9 REA sing 361 n n 
C8 H8 REA sing 362 n n 
C9 C10 REA doub 363 e n 
C9 C19 REA sing 364 n n 
C10 C11 REA sing 365 n n 
C10 H10 REA sing 366 n n 
C11 C12 REA doub 367 e n 
C11 H11 REA sing 368 n n 
C12 C13 REA sing 369 n n 
C12 H12 REA sing 370 n n 
C13 C14 REA doub 371 e n 
C13 C20 REA sing 372 n n 
C14 C15 REA sing 373 n n 
C14 H14 REA sing 374 n n 
C15 O1 REA doub 375 n n 
C15 O2 REA sing 376 n n 
C16 H161 REA sing 377 n n 
C16 H162 REA sing 378 n n 
C16 H163 REA sing 379 n n 
C17 H171 REA sing 380 n n 
C17 H172 REA sing 381 n n 
C17 H173 REA sing 382 n n 
C18 H181 REA sing 383 n n 
C18 H182 REA sing 384 n n 
C18 H183 REA sing 385 n n 
C19 H191 REA sing 386 n n 
C19 H192 REA sing 387 n n 
C19 H193 REA sing 388 n n 
C20 H201 REA sing 389 n n 
C20 H202 REA sing 390 n n 
C20 H203 REA sing 391 n n 
O2 HO2 REA sing 392 n n 
#
_atom_sites.entry_id                     3A9E 
_atom_sites.fract_transf_matrix[1][1]    0.009497 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009497 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008982 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 754 A 1 1 1 754 754 . 
E 5 REA B 1 1 1 REA REA . 
F 6 HOH A 1 3 3 HOH HOH . 
F 6 HOH A 2 8 8 HOH HOH . 
F 6 HOH A 3 9 9 HOH HOH . 
F 6 HOH A 4 17 17 HOH HOH . 
F 6 HOH A 5 27 27 HOH HOH . 
F 6 HOH A 6 34 34 HOH HOH . 
F 6 HOH A 7 48 48 HOH HOH . 
F 6 HOH A 8 53 53 HOH HOH . 
F 6 HOH A 9 57 57 HOH HOH . 
F 6 HOH A 10 63 63 HOH HOH . 
F 6 HOH A 11 70 70 HOH HOH . 
F 6 HOH A 12 71 71 HOH HOH . 
F 6 HOH A 13 73 73 HOH HOH . 
F 6 HOH A 14 75 75 HOH HOH . 
F 6 HOH A 15 77 77 HOH HOH . 
F 6 HOH A 16 79 79 HOH HOH . 
F 6 HOH A 17 80 80 HOH HOH . 
F 6 HOH A 18 82 82 HOH HOH . 
F 6 HOH A 19 86 86 HOH HOH . 
F 6 HOH A 20 87 87 HOH HOH . 
F 6 HOH A 21 101 101 HOH HOH . 
F 6 HOH A 22 104 104 HOH HOH . 
F 6 HOH A 23 132 132 HOH HOH . 
F 6 HOH A 24 133 133 HOH HOH . 
F 6 HOH A 25 134 134 HOH HOH . 
F 6 HOH A 26 135 135 HOH HOH . 
F 6 HOH A 27 137 137 HOH HOH . 
F 6 HOH A 28 140 140 HOH HOH . 
F 6 HOH A 29 141 141 HOH HOH . 
F 6 HOH A 30 142 142 HOH HOH . 
F 6 HOH A 31 143 143 HOH HOH . 
F 6 HOH A 32 144 144 HOH HOH . 
F 6 HOH A 33 145 145 HOH HOH . 
F 6 HOH A 34 146 146 HOH HOH . 
F 6 HOH A 35 147 147 HOH HOH . 
F 6 HOH A 36 148 148 HOH HOH . 
F 6 HOH A 37 150 150 HOH HOH . 
F 6 HOH A 38 152 152 HOH HOH . 
F 6 HOH A 39 154 154 HOH HOH . 
F 6 HOH A 40 156 156 HOH HOH . 
F 6 HOH A 41 159 159 HOH HOH . 
F 6 HOH A 42 186 186 HOH HOH . 
F 6 HOH A 43 191 191 HOH HOH . 
F 6 HOH A 44 192 192 HOH HOH . 
F 6 HOH A 45 193 193 HOH HOH . 
F 6 HOH A 46 194 194 HOH HOH . 
F 6 HOH A 47 195 195 HOH HOH . 
F 6 HOH A 48 197 197 HOH HOH . 
F 6 HOH A 49 198 198 HOH HOH . 
F 6 HOH A 50 202 202 HOH HOH . 
F 6 HOH A 51 205 205 HOH HOH . 
F 6 HOH A 52 219 219 HOH HOH . 
F 6 HOH A 53 220 220 HOH HOH . 
F 6 HOH A 54 221 221 HOH HOH . 
G 6 HOH B 1 4 4 HOH HOH . 
G 6 HOH B 2 5 5 HOH HOH . 
G 6 HOH B 3 12 12 HOH HOH . 
G 6 HOH B 4 13 13 HOH HOH . 
G 6 HOH B 5 14 14 HOH HOH . 
G 6 HOH B 6 16 16 HOH HOH . 
G 6 HOH B 7 18 18 HOH HOH . 
G 6 HOH B 8 21 21 HOH HOH . 
G 6 HOH B 9 24 24 HOH HOH . 
G 6 HOH B 10 29 29 HOH HOH . 
G 6 HOH B 11 32 32 HOH HOH . 
G 6 HOH B 12 37 37 HOH HOH . 
G 6 HOH B 13 38 38 HOH HOH . 
G 6 HOH B 14 40 40 HOH HOH . 
G 6 HOH B 15 41 41 HOH HOH . 
G 6 HOH B 16 45 45 HOH HOH . 
G 6 HOH B 17 54 54 HOH HOH . 
G 6 HOH B 18 66 66 HOH HOH . 
G 6 HOH B 19 68 68 HOH HOH . 
G 6 HOH B 20 72 72 HOH HOH . 
G 6 HOH B 21 74 74 HOH HOH . 
G 6 HOH B 22 76 76 HOH HOH . 
G 6 HOH B 23 81 81 HOH HOH . 
G 6 HOH B 24 93 93 HOH HOH . 
G 6 HOH B 25 107 107 HOH HOH . 
G 6 HOH B 26 116 116 HOH HOH . 
G 6 HOH B 27 123 123 HOH HOH . 
G 6 HOH B 28 125 125 HOH HOH . 
G 6 HOH B 29 151 151 HOH HOH . 
G 6 HOH B 30 422 155 HOH HOH . 
G 6 HOH B 31 423 157 HOH HOH . 
G 6 HOH B 32 424 160 HOH HOH . 
G 6 HOH B 33 425 161 HOH HOH . 
G 6 HOH B 34 426 165 HOH HOH . 
G 6 HOH B 35 427 166 HOH HOH . 
G 6 HOH B 36 428 167 HOH HOH . 
G 6 HOH B 37 429 168 HOH HOH . 
G 6 HOH B 38 430 169 HOH HOH . 
G 6 HOH B 39 431 172 HOH HOH . 
G 6 HOH B 40 432 173 HOH HOH . 
G 6 HOH B 41 433 174 HOH HOH . 
G 6 HOH B 42 434 175 HOH HOH . 
G 6 HOH B 43 435 176 HOH HOH . 
G 6 HOH B 44 436 177 HOH HOH . 
G 6 HOH B 45 437 178 HOH HOH . 
G 6 HOH B 46 438 179 HOH HOH . 
G 6 HOH B 47 439 185 HOH HOH . 
G 6 HOH B 48 440 201 HOH HOH . 
G 6 HOH B 49 441 204 HOH HOH . 
G 6 HOH B 50 442 206 HOH HOH . 
G 6 HOH B 51 443 208 HOH HOH . 
G 6 HOH B 52 444 209 HOH HOH . 
G 6 HOH B 53 445 210 HOH HOH . 
G 6 HOH B 54 446 211 HOH HOH . 
G 6 HOH B 55 447 212 HOH HOH . 
G 6 HOH B 56 448 214 HOH HOH . 
G 6 HOH B 57 449 216 HOH HOH . 
G 6 HOH B 58 450 218 HOH HOH . 
G 6 HOH B 59 451 222 HOH HOH . 
G 6 HOH B 60 452 223 HOH HOH . 
H 6 HOH I 1 184 184 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 REA . . . E 5 36.992 49.005 18.962 1 77.34 ? C1 REA 1 B 1 
HETATM 2 C C2 REA . . . E 5 37.583 47.732 18.377 1 81.36 ? C2 REA 1 B 1 
HETATM 3 C C3 REA . . . E 5 37.042 46.519 19.119 1 80.12 ? C3 REA 1 B 1 
HETATM 4 C C4 REA . . . E 5 35.547 46.351 18.886 1 76.09 ? C4 REA 1 B 1 
HETATM 5 C C5 REA . . . E 5 34.824 47.677 18.797 1 74.55 ? C5 REA 1 B 1 
HETATM 6 C C6 REA . . . E 5 35.476 48.903 18.95 1 76.16 ? C6 REA 1 B 1 
HETATM 7 C C7 REA . . . E 5 34.687 50.137 19.103 1 72.74 ? C7 REA 1 B 1 
HETATM 8 C C8 REA . . . E 5 33.793 50.28 20.259 1 61.07 ? C8 REA 1 B 1 
HETATM 9 C C9 REA . . . E 5 32.641 51.189 20.231 1 43.39 ? C9 REA 1 B 1 
HETATM 10 C C10 REA . . . E 5 31.342 50.673 20.677 1 47 ? C10 REA 1 B 1 
HETATM 11 C C11 REA . . . E 5 30.499 51.416 21.621 1 50.23 ? C11 REA 1 B 1 
HETATM 12 C C12 REA . . . E 5 29.741 50.624 22.596 1 56.28 ? C12 REA 1 B 1 
HETATM 13 C C13 REA . . . E 5 28.516 51.13 23.224 1 64.34 ? C13 REA 1 B 1 
HETATM 14 C C14 REA . . . E 5 27.781 50.245 24.043 1 72.47 ? C14 REA 1 B 1 
HETATM 15 C C15 REA . . . E 5 26.701 50.678 24.942 1 74.61 ? C15 REA 1 B 1 
HETATM 16 C C16 REA . . . E 5 37.402 50.212 18.126 1 70.35 ? C16 REA 1 B 1 
HETATM 17 C C17 REA . . . E 5 37.456 49.181 20.403 1 80.2 ? C17 REA 1 B 1 
HETATM 18 C C18 REA . . . E 5 33.347 47.656 18.525 1 72.06 ? C18 REA 1 B 1 
HETATM 19 C C19 REA . . . E 5 32.786 52.605 19.76 1 34.48 ? C19 REA 1 B 1 
HETATM 20 C C20 REA . . . E 5 28.075 52.545 22.986 1 63.37 ? C20 REA 1 B 1 
HETATM 21 O O1 REA . . . E 5 26.463 50.02 25.977 1 76.73 ? O1 REA 1 B 1 
HETATM 22 O O2 REA . . . E 5 26 51.682 24.692 1 76.66 ? O2 REA 1 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           239 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           22 
#