data_3AB2
#
_model_server_result.job_id            uLpgeoaEbgO-0wageDalBA 
_model_server_result.datetime_utc      '2024-11-05 04:59:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ab2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"BA","auth_seq_id":501}' 
#
_entry.id    3AB2 
#
_exptl.entry_id    3AB2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              119.119 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            THREONINE 
_entity.pdbx_number_of_molecules    15 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         71.85 
_cell.angle_beta          69.48 
_cell.angle_gamma         72.72 
_cell.entry_id            3AB2 
_cell.length_a            101.833 
_cell.length_b            119.093 
_cell.length_c            124.384 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3AB2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
PISA tetrameric 4 author_and_software_defined_assembly 3 
PISA tetrameric 4 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,Q,R,S,T,FA,GA,HA,IA 1 1 
E,F,G,H,U,V,W,X,JA,KA,LA,MA 2 1 
I,J,K,L,Y,Z,AA,NA,OA,PA,QA 3 1 
M,N,O,P,BA,CA,DA,EA,RA,SA,TA,UA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
? 3 BA N N 
? 3 CA N N 
? 3 DA N N 
? 3 EA N N 
#
_chem_comp.formula           'C4 H9 N O3' 
_chem_comp.formula_weight    119.119 
_chem_comp.id                THR 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              THREONINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA THR sing 290 n n 
N H THR sing 291 n n 
N H2 THR sing 292 n n 
CA C THR sing 293 n n 
CA CB THR sing 294 n n 
CA HA THR sing 295 n n 
C O THR doub 296 n n 
C OXT THR sing 297 n n 
CB OG1 THR sing 298 n n 
CB CG2 THR sing 299 n n 
CB HB THR sing 300 n n 
OG1 HG1 THR sing 301 n n 
CG2 HG21 THR sing 302 n n 
CG2 HG22 THR sing 303 n n 
CG2 HG23 THR sing 304 n n 
OXT HXT THR sing 305 n n 
#
_atom_sites.entry_id                     3AB2 
_atom_sites.fract_transf_matrix[1][1]    0.00982 
_atom_sites.fract_transf_matrix[1][2]    -0.003055 
_atom_sites.fract_transf_matrix[1][3]    -0.003049 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008794 
_atom_sites.fract_transf_matrix[2][3]    -0.002096 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008825 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
Q 3 THR A 1 501 501 THR THR . 
R 3 THR B 1 501 501 THR THR . 
S 3 THR C 1 501 501 THR THR . 
T 3 THR D 1 501 501 THR THR . 
U 3 THR E 1 501 501 THR THR . 
V 3 THR F 1 501 501 THR THR . 
W 3 THR G 1 501 501 THR THR . 
X 3 THR H 1 501 501 THR THR . 
Y 3 THR J 1 501 501 THR THR . 
Z 3 THR K 1 501 501 THR THR . 
AA 3 THR L 1 501 501 THR THR . 
BA 3 THR M 1 501 501 THR THR . 
CA 3 THR N 1 501 501 THR THR . 
DA 3 THR O 1 501 501 THR THR . 
EA 3 THR P 1 501 501 THR THR . 
FA 4 HOH A 1 502 8 HOH HOH . 
FA 4 HOH A 2 503 12 HOH HOH . 
FA 4 HOH A 3 504 20 HOH HOH . 
FA 4 HOH A 4 505 55 HOH HOH . 
FA 4 HOH A 5 506 62 HOH HOH . 
FA 4 HOH A 6 507 64 HOH HOH . 
FA 4 HOH A 7 508 65 HOH HOH . 
FA 4 HOH A 8 509 66 HOH HOH . 
FA 4 HOH A 9 510 67 HOH HOH . 
FA 4 HOH A 10 511 68 HOH HOH . 
FA 4 HOH A 11 512 69 HOH HOH . 
FA 4 HOH A 12 513 98 HOH HOH . 
FA 4 HOH A 13 514 99 HOH HOH . 
FA 4 HOH A 14 515 100 HOH HOH . 
FA 4 HOH A 15 516 106 HOH HOH . 
FA 4 HOH A 16 517 107 HOH HOH . 
FA 4 HOH A 17 518 111 HOH HOH . 
FA 4 HOH A 18 519 112 HOH HOH . 
FA 4 HOH A 19 520 113 HOH HOH . 
FA 4 HOH A 20 521 114 HOH HOH . 
FA 4 HOH A 21 522 115 HOH HOH . 
FA 4 HOH A 22 523 116 HOH HOH . 
FA 4 HOH A 23 524 117 HOH HOH . 
FA 4 HOH A 24 525 118 HOH HOH . 
FA 4 HOH A 25 526 119 HOH HOH . 
FA 4 HOH A 26 527 164 HOH HOH . 
FA 4 HOH A 27 528 172 HOH HOH . 
FA 4 HOH A 28 529 174 HOH HOH . 
FA 4 HOH A 29 530 176 HOH HOH . 
FA 4 HOH A 30 531 181 HOH HOH . 
FA 4 HOH A 31 532 183 HOH HOH . 
FA 4 HOH A 32 533 184 HOH HOH . 
FA 4 HOH A 33 534 236 HOH HOH . 
FA 4 HOH A 34 535 244 HOH HOH . 
FA 4 HOH A 35 536 245 HOH HOH . 
FA 4 HOH A 36 537 246 HOH HOH . 
GA 4 HOH B 1 226 226 HOH HOH . 
GA 4 HOH B 2 227 227 HOH HOH . 
GA 4 HOH B 3 228 228 HOH HOH . 
GA 4 HOH B 4 229 229 HOH HOH . 
GA 4 HOH B 5 230 230 HOH HOH . 
GA 4 HOH B 6 502 5 HOH HOH . 
GA 4 HOH B 7 503 61 HOH HOH . 
GA 4 HOH B 8 504 63 HOH HOH . 
GA 4 HOH B 9 505 70 HOH HOH . 
GA 4 HOH B 10 506 89 HOH HOH . 
GA 4 HOH B 11 507 120 HOH HOH . 
HA 4 HOH C 1 435 195 HOH HOH . 
HA 4 HOH C 2 502 4 HOH HOH . 
HA 4 HOH C 3 503 33 HOH HOH . 
HA 4 HOH C 4 504 38 HOH HOH . 
HA 4 HOH C 5 505 43 HOH HOH . 
HA 4 HOH C 6 506 52 HOH HOH . 
HA 4 HOH C 7 507 71 HOH HOH . 
HA 4 HOH C 8 508 72 HOH HOH . 
HA 4 HOH C 9 509 73 HOH HOH . 
HA 4 HOH C 10 510 101 HOH HOH . 
HA 4 HOH C 11 511 102 HOH HOH . 
HA 4 HOH C 12 512 121 HOH HOH . 
HA 4 HOH C 13 513 122 HOH HOH . 
HA 4 HOH C 14 514 123 HOH HOH . 
HA 4 HOH C 15 515 177 HOH HOH . 
HA 4 HOH C 16 516 182 HOH HOH . 
HA 4 HOH C 17 517 185 HOH HOH . 
HA 4 HOH C 18 518 238 HOH HOH . 
IA 4 HOH D 1 221 221 HOH HOH . 
IA 4 HOH D 2 233 233 HOH HOH . 
IA 4 HOH D 3 502 17 HOH HOH . 
JA 4 HOH E 1 502 15 HOH HOH . 
JA 4 HOH E 2 503 16 HOH HOH . 
JA 4 HOH E 3 504 19 HOH HOH . 
JA 4 HOH E 4 505 26 HOH HOH . 
JA 4 HOH E 5 506 39 HOH HOH . 
JA 4 HOH E 6 507 42 HOH HOH . 
JA 4 HOH E 7 508 50 HOH HOH . 
JA 4 HOH E 8 509 82 HOH HOH . 
JA 4 HOH E 9 510 83 HOH HOH . 
JA 4 HOH E 10 511 84 HOH HOH . 
JA 4 HOH E 11 512 85 HOH HOH . 
JA 4 HOH E 12 513 86 HOH HOH . 
JA 4 HOH E 13 514 93 HOH HOH . 
JA 4 HOH E 14 515 96 HOH HOH . 
JA 4 HOH E 15 516 157 HOH HOH . 
JA 4 HOH E 16 517 158 HOH HOH . 
JA 4 HOH E 17 518 159 HOH HOH . 
JA 4 HOH E 18 519 161 HOH HOH . 
JA 4 HOH E 19 520 209 HOH HOH . 
JA 4 HOH E 20 521 212 HOH HOH . 
JA 4 HOH E 21 522 232 HOH HOH . 
JA 4 HOH E 22 523 235 HOH HOH . 
JA 4 HOH E 23 524 219 HOH HOH . 
KA 4 HOH F 1 220 220 HOH HOH . 
KA 4 HOH F 2 502 6 HOH HOH . 
KA 4 HOH F 3 503 13 HOH HOH . 
KA 4 HOH F 4 504 48 HOH HOH . 
KA 4 HOH F 5 505 53 HOH HOH . 
KA 4 HOH F 6 506 97 HOH HOH . 
KA 4 HOH F 7 507 165 HOH HOH . 
KA 4 HOH F 8 508 169 HOH HOH . 
LA 4 HOH G 1 502 14 HOH HOH . 
LA 4 HOH G 2 503 46 HOH HOH . 
LA 4 HOH G 3 504 103 HOH HOH . 
LA 4 HOH G 4 505 133 HOH HOH . 
LA 4 HOH G 5 506 134 HOH HOH . 
LA 4 HOH G 6 507 135 HOH HOH . 
LA 4 HOH G 7 508 136 HOH HOH . 
LA 4 HOH G 8 509 137 HOH HOH . 
LA 4 HOH G 9 510 138 HOH HOH . 
LA 4 HOH G 10 511 179 HOH HOH . 
LA 4 HOH G 11 512 180 HOH HOH . 
LA 4 HOH G 12 513 191 HOH HOH . 
LA 4 HOH G 13 514 192 HOH HOH . 
LA 4 HOH G 14 515 193 HOH HOH . 
LA 4 HOH G 15 516 210 HOH HOH . 
LA 4 HOH G 16 517 211 HOH HOH . 
LA 4 HOH G 17 518 231 HOH HOH . 
LA 4 HOH G 18 519 240 HOH HOH . 
MA 4 HOH H 1 217 217 HOH HOH . 
MA 4 HOH H 2 218 218 HOH HOH . 
MA 4 HOH H 3 502 32 HOH HOH . 
MA 4 HOH H 4 503 37 HOH HOH . 
MA 4 HOH H 5 504 40 HOH HOH . 
MA 4 HOH H 6 505 56 HOH HOH . 
MA 4 HOH H 7 506 92 HOH HOH . 
MA 4 HOH H 8 507 139 HOH HOH . 
MA 4 HOH H 9 508 168 HOH HOH . 
NA 4 HOH I 1 422 36 HOH HOH . 
NA 4 HOH I 2 423 75 HOH HOH . 
NA 4 HOH I 3 424 76 HOH HOH . 
NA 4 HOH I 4 425 77 HOH HOH . 
NA 4 HOH I 5 426 78 HOH HOH . 
NA 4 HOH I 6 427 108 HOH HOH . 
NA 4 HOH I 7 428 140 HOH HOH . 
NA 4 HOH I 8 429 141 HOH HOH . 
NA 4 HOH I 9 430 143 HOH HOH . 
NA 4 HOH I 10 431 145 HOH HOH . 
NA 4 HOH I 11 432 146 HOH HOH . 
NA 4 HOH I 12 433 163 HOH HOH . 
NA 4 HOH I 13 434 194 HOH HOH . 
NA 4 HOH I 14 436 196 HOH HOH . 
NA 4 HOH I 15 437 198 HOH HOH . 
NA 4 HOH I 16 438 241 HOH HOH . 
OA 4 HOH J 1 225 225 HOH HOH . 
OA 4 HOH J 2 242 242 HOH HOH . 
OA 4 HOH J 3 502 10 HOH HOH . 
OA 4 HOH J 4 503 51 HOH HOH . 
OA 4 HOH J 5 504 142 HOH HOH . 
OA 4 HOH J 6 505 144 HOH HOH . 
PA 4 HOH K 1 502 1 HOH HOH . 
PA 4 HOH K 2 503 7 HOH HOH . 
PA 4 HOH K 3 504 21 HOH HOH . 
PA 4 HOH K 4 505 22 HOH HOH . 
PA 4 HOH K 5 506 23 HOH HOH . 
PA 4 HOH K 6 507 35 HOH HOH . 
PA 4 HOH K 7 508 44 HOH HOH . 
PA 4 HOH K 8 509 79 HOH HOH . 
PA 4 HOH K 9 510 80 HOH HOH . 
PA 4 HOH K 10 511 109 HOH HOH . 
PA 4 HOH K 11 512 110 HOH HOH . 
PA 4 HOH K 12 513 147 HOH HOH . 
PA 4 HOH K 13 514 148 HOH HOH . 
PA 4 HOH K 14 515 149 HOH HOH . 
PA 4 HOH K 15 516 150 HOH HOH . 
PA 4 HOH K 16 517 151 HOH HOH . 
PA 4 HOH K 17 518 152 HOH HOH . 
PA 4 HOH K 18 519 162 HOH HOH . 
PA 4 HOH K 19 520 166 HOH HOH . 
PA 4 HOH K 20 521 167 HOH HOH . 
PA 4 HOH K 21 522 175 HOH HOH . 
PA 4 HOH K 22 523 197 HOH HOH . 
PA 4 HOH K 23 524 199 HOH HOH . 
PA 4 HOH K 24 525 200 HOH HOH . 
PA 4 HOH K 25 526 234 HOH HOH . 
QA 4 HOH L 1 222 222 HOH HOH . 
QA 4 HOH L 2 243 243 HOH HOH . 
QA 4 HOH L 3 502 2 HOH HOH . 
QA 4 HOH L 4 503 30 HOH HOH . 
QA 4 HOH L 5 504 41 HOH HOH . 
RA 4 HOH M 1 502 3 HOH HOH . 
RA 4 HOH M 2 503 11 HOH HOH . 
RA 4 HOH M 3 504 18 HOH HOH . 
RA 4 HOH M 4 505 28 HOH HOH . 
RA 4 HOH M 5 506 31 HOH HOH . 
RA 4 HOH M 6 507 45 HOH HOH . 
RA 4 HOH M 7 508 81 HOH HOH . 
RA 4 HOH M 8 509 91 HOH HOH . 
RA 4 HOH M 9 510 95 HOH HOH . 
RA 4 HOH M 10 511 104 HOH HOH . 
RA 4 HOH M 11 512 105 HOH HOH . 
RA 4 HOH M 12 513 153 HOH HOH . 
RA 4 HOH M 13 514 154 HOH HOH . 
RA 4 HOH M 14 515 155 HOH HOH . 
RA 4 HOH M 15 516 156 HOH HOH . 
RA 4 HOH M 16 517 173 HOH HOH . 
RA 4 HOH M 17 518 204 HOH HOH . 
RA 4 HOH M 18 519 205 HOH HOH . 
RA 4 HOH M 19 520 206 HOH HOH . 
RA 4 HOH M 20 521 207 HOH HOH . 
RA 4 HOH M 21 522 237 HOH HOH . 
SA 4 HOH N 1 208 208 HOH HOH . 
SA 4 HOH N 2 223 223 HOH HOH . 
SA 4 HOH N 3 224 224 HOH HOH . 
SA 4 HOH N 4 502 88 HOH HOH . 
TA 4 HOH O 1 502 9 HOH HOH . 
TA 4 HOH O 2 503 24 HOH HOH . 
TA 4 HOH O 3 504 29 HOH HOH . 
TA 4 HOH O 4 505 34 HOH HOH . 
TA 4 HOH O 5 506 47 HOH HOH . 
TA 4 HOH O 6 507 54 HOH HOH . 
TA 4 HOH O 7 508 57 HOH HOH . 
TA 4 HOH O 8 509 58 HOH HOH . 
TA 4 HOH O 9 510 59 HOH HOH . 
TA 4 HOH O 10 511 60 HOH HOH . 
TA 4 HOH O 11 512 74 HOH HOH . 
TA 4 HOH O 12 513 94 HOH HOH . 
TA 4 HOH O 13 514 124 HOH HOH . 
TA 4 HOH O 14 515 125 HOH HOH . 
TA 4 HOH O 15 516 126 HOH HOH . 
TA 4 HOH O 16 517 127 HOH HOH . 
TA 4 HOH O 17 518 128 HOH HOH . 
TA 4 HOH O 18 519 129 HOH HOH . 
TA 4 HOH O 19 520 130 HOH HOH . 
TA 4 HOH O 20 521 131 HOH HOH . 
TA 4 HOH O 21 522 132 HOH HOH . 
TA 4 HOH O 22 523 170 HOH HOH . 
TA 4 HOH O 23 524 178 HOH HOH . 
TA 4 HOH O 24 525 187 HOH HOH . 
TA 4 HOH O 25 526 188 HOH HOH . 
TA 4 HOH O 26 527 189 HOH HOH . 
TA 4 HOH O 27 528 190 HOH HOH . 
TA 4 HOH O 28 529 201 HOH HOH . 
TA 4 HOH O 29 530 202 HOH HOH . 
TA 4 HOH O 30 531 203 HOH HOH . 
TA 4 HOH O 31 532 239 HOH HOH . 
UA 4 HOH P 1 186 186 HOH HOH . 
UA 4 HOH P 2 213 213 HOH HOH . 
UA 4 HOH P 3 214 214 HOH HOH . 
UA 4 HOH P 4 215 215 HOH HOH . 
UA 4 HOH P 5 216 216 HOH HOH . 
UA 4 HOH P 6 502 25 HOH HOH . 
UA 4 HOH P 7 503 27 HOH HOH . 
UA 4 HOH P 8 504 49 HOH HOH . 
UA 4 HOH P 9 505 87 HOH HOH . 
UA 4 HOH P 10 506 90 HOH HOH . 
UA 4 HOH P 11 507 160 HOH HOH . 
UA 4 HOH P 12 508 171 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N THR . . . BA 3 13.561 79.668 23.863 1 39.64 ? N THR 501 M 1 
HETATM 2 C CA THR . . . BA 3 12.134 79.234 23.898 1 39.72 ? CA THR 501 M 1 
HETATM 3 C C THR . . . BA 3 11.742 78.65 25.261 1 39.64 ? C THR 501 M 1 
HETATM 4 O O THR . . . BA 3 12.586 78.267 26.071 1 39.47 ? O THR 501 M 1 
HETATM 5 C CB THR . . . BA 3 11.835 78.204 22.789 1 39.73 ? CB THR 501 M 1 
HETATM 6 O OG1 THR . . . BA 3 12.693 77.068 22.937 1 39.79 ? OG1 THR 501 M 1 
HETATM 7 C CG2 THR . . . BA 3 12.058 78.824 21.42 1 39.99 ? CG2 THR 501 M 1 
HETATM 8 O OXT THR . . . BA 3 10.559 78.557 25.594 1 39.64 ? OXT THR 501 M 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    40 
_model_server_stats.query_time_ms           214 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#