data_3AB5
#
_model_server_result.job_id            H_ZzJzQ7b1d9hVHXHRsINg 
_model_server_result.datetime_utc      '2025-03-04 07:39:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ab5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":100}' 
#
_entry.id    3AB5 
#
_exptl.entry_id    3AB5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              175.82 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE2/S2 (INORGANIC) CLUSTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.32 
_cell.angle_gamma         90 
_cell.entry_id            3AB5 
_cell.length_a            36.586 
_cell.length_b            54.922 
_cell.length_c            42.935 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3AB5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 40 A CYS 40 1_555 C FE1 FES . A FES 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc2 A SG CYS 45 A CYS 45 1_555 C FE1 FES . A FES 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc3 A SG CYS 48 A CYS 48 1_555 C FE2 FES . A FES 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc4 A SG CYS 78 A CYS 78 1_555 C FE2 FES . A FES 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc5 B SG CYS 40 B CYS 40 1_555 D FE1 FES . B FES 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc6 B SG CYS 45 B CYS 45 1_555 D FE1 FES . B FES 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc7 B SG CYS 48 B CYS 48 1_555 D FE2 FES . B FES 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc8 B SG CYS 78 B CYS 78 1_555 D FE2 FES . B FES 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
#
_chem_comp.formula           'Fe2 S2' 
_chem_comp.formula_weight    175.82 
_chem_comp.id                FES 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE2/S2 (INORGANIC) CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S1 FES sing 83 n n 
FE1 S2 FES sing 84 n n 
FE2 S1 FES sing 85 n n 
FE2 S2 FES sing 86 n n 
#
_atom_sites.entry_id                     3AB5 
_atom_sites.fract_transf_matrix[1][1]    0.027333 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003025 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018208 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023433 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FES A 1 100 100 FES FES . 
D 2 FES B 1 100 100 FES FES . 
E 3 HOH A 1 1604 1604 HOH HOH . 
E 3 HOH A 2 1605 1605 HOH HOH . 
E 3 HOH A 3 1606 1606 HOH HOH . 
E 3 HOH A 4 1607 1607 HOH HOH . 
E 3 HOH A 5 1608 1608 HOH HOH . 
E 3 HOH A 6 1609 1609 HOH HOH . 
E 3 HOH A 7 1612 1612 HOH HOH . 
E 3 HOH A 8 1613 1613 HOH HOH . 
E 3 HOH A 9 1614 1614 HOH HOH . 
E 3 HOH A 10 1617 1617 HOH HOH . 
E 3 HOH A 11 1618 1618 HOH HOH . 
E 3 HOH A 12 1620 1620 HOH HOH . 
E 3 HOH A 13 1624 1624 HOH HOH . 
E 3 HOH A 14 1625 1625 HOH HOH . 
E 3 HOH A 15 1628 1628 HOH HOH . 
E 3 HOH A 16 1629 1629 HOH HOH . 
E 3 HOH A 17 1630 1630 HOH HOH . 
E 3 HOH A 18 1632 1632 HOH HOH . 
E 3 HOH A 19 1635 1635 HOH HOH . 
E 3 HOH A 20 1637 1637 HOH HOH . 
E 3 HOH A 21 1639 1639 HOH HOH . 
E 3 HOH A 22 1640 1640 HOH HOH . 
E 3 HOH A 23 1642 1642 HOH HOH . 
E 3 HOH A 24 1643 1643 HOH HOH . 
E 3 HOH A 25 1644 1644 HOH HOH . 
E 3 HOH A 26 1645 1645 HOH HOH . 
E 3 HOH A 27 1646 1646 HOH HOH . 
E 3 HOH A 28 1647 1647 HOH HOH . 
E 3 HOH A 29 1651 1651 HOH HOH . 
E 3 HOH A 30 1652 1652 HOH HOH . 
E 3 HOH A 31 1653 1653 HOH HOH . 
E 3 HOH A 32 1654 1654 HOH HOH . 
E 3 HOH A 33 1656 1656 HOH HOH . 
E 3 HOH A 34 1660 1660 HOH HOH . 
E 3 HOH A 35 1661 1661 HOH HOH . 
E 3 HOH A 36 1664 1664 HOH HOH . 
E 3 HOH A 37 1665 1665 HOH HOH . 
E 3 HOH A 38 1667 1667 HOH HOH . 
E 3 HOH A 39 1668 1668 HOH HOH . 
E 3 HOH A 40 1669 1669 HOH HOH . 
E 3 HOH A 41 1670 1670 HOH HOH . 
E 3 HOH A 42 1672 1672 HOH HOH . 
E 3 HOH A 43 1676 1676 HOH HOH . 
E 3 HOH A 44 1677 1677 HOH HOH . 
E 3 HOH A 45 1678 1678 HOH HOH . 
E 3 HOH A 46 1680 1680 HOH HOH . 
E 3 HOH A 47 1681 1681 HOH HOH . 
E 3 HOH A 48 1683 1683 HOH HOH . 
E 3 HOH A 49 1684 1684 HOH HOH . 
E 3 HOH A 50 1687 1687 HOH HOH . 
E 3 HOH A 51 1688 1688 HOH HOH . 
E 3 HOH A 52 1692 1692 HOH HOH . 
E 3 HOH A 53 1693 1693 HOH HOH . 
E 3 HOH A 54 1694 1694 HOH HOH . 
E 3 HOH A 55 1695 1695 HOH HOH . 
E 3 HOH A 56 1697 1697 HOH HOH . 
E 3 HOH A 57 1698 1698 HOH HOH . 
E 3 HOH A 58 1699 1699 HOH HOH . 
E 3 HOH A 59 1701 1701 HOH HOH . 
E 3 HOH A 60 1801 1801 HOH HOH . 
F 3 HOH B 1 1610 1610 HOH HOH . 
F 3 HOH B 2 1611 1611 HOH HOH . 
F 3 HOH B 3 1615 1615 HOH HOH . 
F 3 HOH B 4 1616 1616 HOH HOH . 
F 3 HOH B 5 1619 1619 HOH HOH . 
F 3 HOH B 6 1621 1621 HOH HOH . 
F 3 HOH B 7 1622 1622 HOH HOH . 
F 3 HOH B 8 1623 1623 HOH HOH . 
F 3 HOH B 9 1626 1626 HOH HOH . 
F 3 HOH B 10 1627 1627 HOH HOH . 
F 3 HOH B 11 1631 1631 HOH HOH . 
F 3 HOH B 12 1634 1634 HOH HOH . 
F 3 HOH B 13 1636 1636 HOH HOH . 
F 3 HOH B 14 1638 1638 HOH HOH . 
F 3 HOH B 15 1641 1641 HOH HOH . 
F 3 HOH B 16 1648 1648 HOH HOH . 
F 3 HOH B 17 1649 1649 HOH HOH . 
F 3 HOH B 18 1655 1655 HOH HOH . 
F 3 HOH B 19 1657 1657 HOH HOH . 
F 3 HOH B 20 1658 1658 HOH HOH . 
F 3 HOH B 21 1659 1659 HOH HOH . 
F 3 HOH B 22 1662 1662 HOH HOH . 
F 3 HOH B 23 1663 1663 HOH HOH . 
F 3 HOH B 24 1666 1666 HOH HOH . 
F 3 HOH B 25 1671 1671 HOH HOH . 
F 3 HOH B 26 1673 1673 HOH HOH . 
F 3 HOH B 27 1674 1674 HOH HOH . 
F 3 HOH B 28 1675 1675 HOH HOH . 
F 3 HOH B 29 1679 1679 HOH HOH . 
F 3 HOH B 30 1682 1682 HOH HOH . 
F 3 HOH B 31 1685 1685 HOH HOH . 
F 3 HOH B 32 1686 1686 HOH HOH . 
F 3 HOH B 33 1689 1689 HOH HOH . 
F 3 HOH B 34 1690 1690 HOH HOH . 
F 3 HOH B 35 1691 1691 HOH HOH . 
F 3 HOH B 36 1696 1696 HOH HOH . 
F 3 HOH B 37 1700 1700 HOH HOH . 
F 3 HOH B 38 1702 1702 HOH HOH . 
F 3 HOH B 39 1703 1703 HOH HOH . 
F 3 HOH B 40 1802 1802 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 FES . . . D 2 35.093 -3.949 5.516 1 9.51 ? FE1 FES 100 B 1 
HETATM 2 FE FE2 FES . . . D 2 34.912 -2.987 2.942 1 8.08 ? FE2 FES 100 B 1 
HETATM 3 S S1 FES . . . D 2 36.622 -4.117 3.853 1 9.62 ? S1 FES 100 B 1 
HETATM 4 S S2 FES . . . D 2 33.523 -2.665 4.603 1 8.99 ? S2 FES 100 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#