data_3ACB # _model_server_result.job_id '_cw9fpk20zWj1Ox-hdyTJg' _model_server_result.datetime_utc '2024-10-14 08:25:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3acb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":792}' # _entry.id 3ACB # _exptl.entry_id 3ACB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 88.105 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1,4-DIETHYLENE DIOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ACB _cell.length_a 66.712 _cell.length_b 66.712 _cell.length_c 152.557 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ACB _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 33.356 57.774287 25.426167 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C4 H8 O2' _chem_comp.formula_weight 88.105 _chem_comp.id DIO _chem_comp.mon_nstd_flag . _chem_comp.name '1,4-DIETHYLENE DIOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C1' DIO sing 83 n n C1 O1 DIO sing 84 n n C1 H11 DIO sing 85 n n C1 H12 DIO sing 86 n n C2 C2' DIO sing 87 n n C2 O1 DIO sing 88 n n C2 H21 DIO sing 89 n n C2 H22 DIO sing 90 n n C1' O1' DIO sing 91 n n C1' "H1'1" DIO sing 92 n n C1' "H1'2" DIO sing 93 n n C2' O1' DIO sing 94 n n C2' "H2'1" DIO sing 95 n n C2' "H2'2" DIO sing 96 n n # _atom_sites.entry_id 3ACB _atom_sites.fract_transf_matrix[1][1] 0.01499 _atom_sites.fract_transf_matrix[1][2] 0.008654 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017309 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006555 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DIO A 1 791 791 DIO DIO . C 2 DIO A 1 792 792 DIO DIO . D 3 HOH A 1 793 793 HOH HOH . D 3 HOH A 2 794 794 HOH HOH . D 3 HOH A 3 795 795 HOH HOH . D 3 HOH A 4 796 796 HOH HOH . D 3 HOH A 5 797 797 HOH HOH . D 3 HOH A 6 798 798 HOH HOH . D 3 HOH A 7 799 799 HOH HOH . D 3 HOH A 8 800 800 HOH HOH . D 3 HOH A 9 801 801 HOH HOH . D 3 HOH A 10 802 802 HOH HOH . D 3 HOH A 11 803 803 HOH HOH . D 3 HOH A 12 804 804 HOH HOH . D 3 HOH A 13 805 805 HOH HOH . D 3 HOH A 14 806 806 HOH HOH . D 3 HOH A 15 807 807 HOH HOH . D 3 HOH A 16 808 808 HOH HOH . D 3 HOH A 17 809 809 HOH HOH . D 3 HOH A 18 810 810 HOH HOH . D 3 HOH A 19 811 811 HOH HOH . D 3 HOH A 20 812 812 HOH HOH . D 3 HOH A 21 813 813 HOH HOH . D 3 HOH A 22 814 814 HOH HOH . D 3 HOH A 23 815 815 HOH HOH . D 3 HOH A 24 816 816 HOH HOH . D 3 HOH A 25 817 817 HOH HOH . D 3 HOH A 26 818 818 HOH HOH . D 3 HOH A 27 819 819 HOH HOH . D 3 HOH A 28 820 820 HOH HOH . D 3 HOH A 29 821 821 HOH HOH . D 3 HOH A 30 822 822 HOH HOH . D 3 HOH A 31 823 823 HOH HOH . D 3 HOH A 32 824 824 HOH HOH . D 3 HOH A 33 825 825 HOH HOH . D 3 HOH A 34 826 826 HOH HOH . D 3 HOH A 35 827 827 HOH HOH . D 3 HOH A 36 828 828 HOH HOH . D 3 HOH A 37 829 829 HOH HOH . D 3 HOH A 38 830 830 HOH HOH . D 3 HOH A 39 831 831 HOH HOH . D 3 HOH A 40 832 832 HOH HOH . D 3 HOH A 41 833 833 HOH HOH . D 3 HOH A 42 834 834 HOH HOH . D 3 HOH A 43 835 835 HOH HOH . D 3 HOH A 44 836 836 HOH HOH . D 3 HOH A 45 837 837 HOH HOH . D 3 HOH A 46 838 838 HOH HOH . D 3 HOH A 47 839 839 HOH HOH . D 3 HOH A 48 840 840 HOH HOH . D 3 HOH A 49 841 841 HOH HOH . D 3 HOH A 50 842 842 HOH HOH . D 3 HOH A 51 843 843 HOH HOH . D 3 HOH A 52 844 844 HOH HOH . D 3 HOH A 53 845 845 HOH HOH . D 3 HOH A 54 846 846 HOH HOH . D 3 HOH A 55 847 847 HOH HOH . D 3 HOH A 56 848 848 HOH HOH . D 3 HOH A 57 849 849 HOH HOH . D 3 HOH A 58 850 850 HOH HOH . D 3 HOH A 59 851 851 HOH HOH . D 3 HOH A 60 852 852 HOH HOH . D 3 HOH A 61 853 853 HOH HOH . D 3 HOH A 62 854 854 HOH HOH . D 3 HOH A 63 855 855 HOH HOH . D 3 HOH A 64 856 856 HOH HOH . D 3 HOH A 65 857 857 HOH HOH . D 3 HOH A 66 858 858 HOH HOH . D 3 HOH A 67 859 859 HOH HOH . D 3 HOH A 68 860 860 HOH HOH . D 3 HOH A 69 861 861 HOH HOH . D 3 HOH A 70 862 862 HOH HOH . D 3 HOH A 71 863 863 HOH HOH . D 3 HOH A 72 864 864 HOH HOH . D 3 HOH A 73 865 865 HOH HOH . D 3 HOH A 74 866 866 HOH HOH . D 3 HOH A 75 867 867 HOH HOH . D 3 HOH A 76 868 868 HOH HOH . D 3 HOH A 77 869 869 HOH HOH . D 3 HOH A 78 870 870 HOH HOH . D 3 HOH A 79 871 871 HOH HOH . D 3 HOH A 80 872 872 HOH HOH . D 3 HOH A 81 873 873 HOH HOH . D 3 HOH A 82 875 875 HOH HOH . D 3 HOH A 83 876 876 HOH HOH . D 3 HOH A 84 877 877 HOH HOH . D 3 HOH A 85 878 878 HOH HOH . D 3 HOH A 86 879 879 HOH HOH . D 3 HOH A 87 880 880 HOH HOH . D 3 HOH A 88 881 881 HOH HOH . D 3 HOH A 89 882 882 HOH HOH . D 3 HOH A 90 883 883 HOH HOH . D 3 HOH A 91 884 884 HOH HOH . D 3 HOH A 92 885 885 HOH HOH . D 3 HOH A 93 886 886 HOH HOH . D 3 HOH A 94 887 887 HOH HOH . D 3 HOH A 95 888 888 HOH HOH . D 3 HOH A 96 889 889 HOH HOH . D 3 HOH A 97 890 890 HOH HOH . D 3 HOH A 98 891 891 HOH HOH . D 3 HOH A 99 892 892 HOH HOH . D 3 HOH A 100 893 893 HOH HOH . D 3 HOH A 101 894 894 HOH HOH . D 3 HOH A 102 895 895 HOH HOH . D 3 HOH A 103 896 896 HOH HOH . D 3 HOH A 104 897 897 HOH HOH . D 3 HOH A 105 898 898 HOH HOH . D 3 HOH A 106 899 899 HOH HOH . D 3 HOH A 107 900 900 HOH HOH . D 3 HOH A 108 901 901 HOH HOH . D 3 HOH A 109 902 902 HOH HOH . D 3 HOH A 110 903 903 HOH HOH . D 3 HOH A 111 904 904 HOH HOH . D 3 HOH A 112 905 905 HOH HOH . D 3 HOH A 113 906 906 HOH HOH . D 3 HOH A 114 907 907 HOH HOH . D 3 HOH A 115 908 908 HOH HOH . D 3 HOH A 116 909 909 HOH HOH . D 3 HOH A 117 910 910 HOH HOH . D 3 HOH A 118 911 911 HOH HOH . D 3 HOH A 119 912 912 HOH HOH . D 3 HOH A 120 914 914 HOH HOH . D 3 HOH A 121 915 915 HOH HOH . D 3 HOH A 122 916 916 HOH HOH . D 3 HOH A 123 917 917 HOH HOH . D 3 HOH A 124 919 919 HOH HOH . D 3 HOH A 125 920 920 HOH HOH . D 3 HOH A 126 921 921 HOH HOH . D 3 HOH A 127 922 922 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DIO . . . C 2 1.184 22.251 22.792 1 54.79 ? C1 DIO 792 A 1 HETATM 2 C C2 DIO . . . C 2 0.774 20.39 24.242 1 55.88 ? C2 DIO 792 A 1 HETATM 3 C C1' DIO . . . C 2 2.453 22.594 23.592 1 54.79 ? C1' DIO 792 A 1 HETATM 4 C C2' DIO . . . C 2 2.047 20.728 25.066 1 55.59 ? C2' DIO 792 A 1 HETATM 5 O O1 DIO . . . C 2 0.223 21.616 23.667 1 55.52 ? O1 DIO 792 A 1 HETATM 6 O O1' DIO . . . C 2 3.008 21.36 24.168 1 54.92 ? O1' DIO 792 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 622 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #