data_3ACJ # _model_server_result.job_id 1JVUqGYiSLrUO_nW7uiL_A _model_server_result.datetime_utc '2024-12-21 17:19:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3acj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":513}' # _entry.id 3ACJ # _exptl.entry_id 3ACJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 315.39 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-(3,4-dimethoxyphenyl)-5-(ethylsulfanyl)imidazo[1,2-c]pyrimidine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ACJ _cell.length_a 42.233 _cell.length_b 73.671 _cell.length_c 92.719 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ACJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 169 A GLU 393 1_555 A N PTR 170 A PTR 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C PTR 170 A PTR 394 1_555 A N THR 171 A THR 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C16 H17 N3 O2 S' _chem_comp.formula_weight 315.39 _chem_comp.id KSS _chem_comp.mon_nstd_flag . _chem_comp.name 7-(3,4-dimethoxyphenyl)-5-(ethylsulfanyl)imidazo[1,2-c]pyrimidine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 KSS sing 182 n y C1 N5 KSS doub 183 n y C1 C6 KSS sing 184 n y N2 C3 KSS sing 185 n y N2 C9 KSS sing 186 n y C3 C4 KSS doub 187 n y C4 N5 KSS sing 188 n y C6 C7 KSS doub 189 n y C7 N8 KSS sing 190 n y C7 C21 KSS sing 191 n y N8 C9 KSS doub 192 n y C9 S12 KSS sing 193 n n S12 C13 KSS sing 194 n n C13 C14 KSS sing 195 n n C21 C22 KSS doub 196 n y C21 C26 KSS sing 197 n y C22 C23 KSS sing 198 n y C23 C24 KSS doub 199 n y C24 C25 KSS sing 200 n y C24 O30 KSS sing 201 n n C25 C26 KSS doub 202 n y C25 O31 KSS sing 203 n n O30 C32 KSS sing 204 n n O31 C36 KSS sing 205 n n C3 H3 KSS sing 206 n n C4 H4 KSS sing 207 n n C6 H6 KSS sing 208 n n C13 H13 KSS sing 209 n n C13 H13A KSS sing 210 n n C14 H14 KSS sing 211 n n C14 H14A KSS sing 212 n n C14 H14B KSS sing 213 n n C22 H22 KSS sing 214 n n C23 H23 KSS sing 215 n n C26 H26 KSS sing 216 n n C32 H32 KSS sing 217 n n C32 H32A KSS sing 218 n n C32 H32B KSS sing 219 n n C36 H36 KSS sing 220 n n C36 H36A KSS sing 221 n n C36 H36B KSS sing 222 n n # _atom_sites.entry_id 3ACJ _atom_sites.fract_transf_matrix[1][1] 0.023678 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013574 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010785 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 510 502 SO4 SO4 . C 2 SO4 A 1 511 503 SO4 SO4 . D 3 DMS A 1 512 505 DMS DMS . E 4 KSS A 1 513 504 KSS KSF . F 5 HOH A 1 1 1 HOH HOH . F 5 HOH A 2 2 2 HOH HOH . F 5 HOH A 3 3 3 HOH HOH . F 5 HOH A 4 4 4 HOH HOH . F 5 HOH A 5 5 5 HOH HOH . F 5 HOH A 6 6 6 HOH HOH . F 5 HOH A 7 7 7 HOH HOH . F 5 HOH A 8 8 8 HOH HOH . F 5 HOH A 9 9 9 HOH HOH . F 5 HOH A 10 10 10 HOH HOH . F 5 HOH A 11 11 11 HOH HOH . F 5 HOH A 12 12 12 HOH HOH . F 5 HOH A 13 13 13 HOH HOH . F 5 HOH A 14 14 14 HOH HOH . F 5 HOH A 15 15 15 HOH HOH . F 5 HOH A 16 16 16 HOH HOH . F 5 HOH A 17 17 17 HOH HOH . F 5 HOH A 18 18 18 HOH HOH . F 5 HOH A 19 19 19 HOH HOH . F 5 HOH A 20 20 20 HOH HOH . F 5 HOH A 21 21 21 HOH HOH . F 5 HOH A 22 22 22 HOH HOH . F 5 HOH A 23 23 23 HOH HOH . F 5 HOH A 24 24 24 HOH HOH . F 5 HOH A 25 25 25 HOH HOH . F 5 HOH A 26 26 26 HOH HOH . F 5 HOH A 27 27 27 HOH HOH . F 5 HOH A 28 28 28 HOH HOH . F 5 HOH A 29 29 29 HOH HOH . F 5 HOH A 30 30 30 HOH HOH . F 5 HOH A 31 31 31 HOH HOH . F 5 HOH A 32 32 32 HOH HOH . F 5 HOH A 33 33 33 HOH HOH . F 5 HOH A 34 34 34 HOH HOH . F 5 HOH A 35 35 35 HOH HOH . F 5 HOH A 36 36 36 HOH HOH . F 5 HOH A 37 37 37 HOH HOH . F 5 HOH A 38 38 38 HOH HOH . F 5 HOH A 39 39 39 HOH HOH . F 5 HOH A 40 40 40 HOH HOH . F 5 HOH A 41 41 41 HOH HOH . F 5 HOH A 42 42 42 HOH HOH . F 5 HOH A 43 43 43 HOH HOH . F 5 HOH A 44 44 44 HOH HOH . F 5 HOH A 45 45 45 HOH HOH . F 5 HOH A 46 46 46 HOH HOH . F 5 HOH A 47 47 47 HOH HOH . F 5 HOH A 48 48 48 HOH HOH . F 5 HOH A 49 49 49 HOH HOH . F 5 HOH A 50 50 50 HOH HOH . F 5 HOH A 51 51 51 HOH HOH . F 5 HOH A 52 52 52 HOH HOH . F 5 HOH A 53 53 53 HOH HOH . F 5 HOH A 54 54 54 HOH HOH . F 5 HOH A 55 55 55 HOH HOH . F 5 HOH A 56 56 56 HOH HOH . F 5 HOH A 57 57 57 HOH HOH . F 5 HOH A 58 58 58 HOH HOH . F 5 HOH A 59 59 59 HOH HOH . F 5 HOH A 60 60 60 HOH HOH . F 5 HOH A 61 61 61 HOH HOH . F 5 HOH A 62 62 62 HOH HOH . F 5 HOH A 63 63 63 HOH HOH . F 5 HOH A 64 64 64 HOH HOH . F 5 HOH A 65 65 65 HOH HOH . F 5 HOH A 66 66 66 HOH HOH . F 5 HOH A 67 67 67 HOH HOH . F 5 HOH A 68 68 68 HOH HOH . F 5 HOH A 69 69 69 HOH HOH . F 5 HOH A 70 70 70 HOH HOH . F 5 HOH A 71 71 71 HOH HOH . F 5 HOH A 72 72 72 HOH HOH . F 5 HOH A 73 73 73 HOH HOH . F 5 HOH A 74 74 74 HOH HOH . F 5 HOH A 75 75 75 HOH HOH . F 5 HOH A 76 76 76 HOH HOH . F 5 HOH A 77 77 77 HOH HOH . F 5 HOH A 78 78 78 HOH HOH . F 5 HOH A 79 79 79 HOH HOH . F 5 HOH A 80 80 80 HOH HOH . F 5 HOH A 81 81 81 HOH HOH . F 5 HOH A 82 82 82 HOH HOH . F 5 HOH A 83 83 83 HOH HOH . F 5 HOH A 84 84 84 HOH HOH . F 5 HOH A 85 85 85 HOH HOH . F 5 HOH A 86 86 86 HOH HOH . F 5 HOH A 87 87 87 HOH HOH . F 5 HOH A 88 88 88 HOH HOH . F 5 HOH A 89 89 89 HOH HOH . F 5 HOH A 90 90 90 HOH HOH . F 5 HOH A 91 91 91 HOH HOH . F 5 HOH A 92 92 92 HOH HOH . F 5 HOH A 93 93 93 HOH HOH . F 5 HOH A 94 94 94 HOH HOH . F 5 HOH A 95 95 95 HOH HOH . F 5 HOH A 96 96 96 HOH HOH . F 5 HOH A 97 97 97 HOH HOH . F 5 HOH A 98 98 98 HOH HOH . F 5 HOH A 99 99 99 HOH HOH . F 5 HOH A 100 100 100 HOH HOH . F 5 HOH A 101 101 101 HOH HOH . F 5 HOH A 102 102 102 HOH HOH . F 5 HOH A 103 103 103 HOH HOH . F 5 HOH A 104 104 104 HOH HOH . F 5 HOH A 105 105 105 HOH HOH . F 5 HOH A 106 106 106 HOH HOH . F 5 HOH A 107 107 107 HOH HOH . F 5 HOH A 108 108 108 HOH HOH . F 5 HOH A 109 109 109 HOH HOH . F 5 HOH A 110 110 110 HOH HOH . F 5 HOH A 111 111 111 HOH HOH . F 5 HOH A 112 112 112 HOH HOH . F 5 HOH A 113 113 113 HOH HOH . F 5 HOH A 114 114 114 HOH HOH . F 5 HOH A 115 115 115 HOH HOH . F 5 HOH A 116 116 116 HOH HOH . F 5 HOH A 117 117 117 HOH HOH . F 5 HOH A 118 118 118 HOH HOH . F 5 HOH A 119 119 119 HOH HOH . F 5 HOH A 120 120 120 HOH HOH . F 5 HOH A 121 121 121 HOH HOH . F 5 HOH A 122 122 122 HOH HOH . F 5 HOH A 123 123 123 HOH HOH . F 5 HOH A 124 124 124 HOH HOH . F 5 HOH A 125 125 125 HOH HOH . F 5 HOH A 126 126 126 HOH HOH . F 5 HOH A 127 127 127 HOH HOH . F 5 HOH A 128 128 128 HOH HOH . F 5 HOH A 129 129 129 HOH HOH . F 5 HOH A 130 130 130 HOH HOH . F 5 HOH A 131 131 131 HOH HOH . F 5 HOH A 132 132 132 HOH HOH . F 5 HOH A 133 133 133 HOH HOH . F 5 HOH A 134 134 134 HOH HOH . F 5 HOH A 135 135 135 HOH HOH . F 5 HOH A 136 136 136 HOH HOH . F 5 HOH A 137 137 137 HOH HOH . F 5 HOH A 138 138 138 HOH HOH . F 5 HOH A 139 139 139 HOH HOH . F 5 HOH A 140 140 140 HOH HOH . F 5 HOH A 141 141 141 HOH HOH . F 5 HOH A 142 142 142 HOH HOH . F 5 HOH A 143 143 143 HOH HOH . F 5 HOH A 144 144 144 HOH HOH . F 5 HOH A 145 145 145 HOH HOH . F 5 HOH A 146 146 146 HOH HOH . F 5 HOH A 147 147 147 HOH HOH . F 5 HOH A 148 148 148 HOH HOH . F 5 HOH A 149 149 149 HOH HOH . F 5 HOH A 150 150 150 HOH HOH . F 5 HOH A 151 151 151 HOH HOH . F 5 HOH A 152 152 152 HOH HOH . F 5 HOH A 153 153 153 HOH HOH . F 5 HOH A 154 154 154 HOH HOH . F 5 HOH A 155 155 155 HOH HOH . F 5 HOH A 156 156 156 HOH HOH . F 5 HOH A 157 157 157 HOH HOH . F 5 HOH A 158 158 158 HOH HOH . F 5 HOH A 159 159 159 HOH HOH . F 5 HOH A 160 160 160 HOH HOH . F 5 HOH A 161 161 161 HOH HOH . F 5 HOH A 162 162 162 HOH HOH . F 5 HOH A 163 163 163 HOH HOH . F 5 HOH A 164 164 164 HOH HOH . F 5 HOH A 165 165 165 HOH HOH . F 5 HOH A 166 166 166 HOH HOH . F 5 HOH A 167 167 167 HOH HOH . F 5 HOH A 168 168 168 HOH HOH . F 5 HOH A 169 169 169 HOH HOH . F 5 HOH A 170 170 170 HOH HOH . F 5 HOH A 171 171 171 HOH HOH . F 5 HOH A 172 172 172 HOH HOH . F 5 HOH A 173 173 173 HOH HOH . F 5 HOH A 174 174 174 HOH HOH . F 5 HOH A 175 175 175 HOH HOH . F 5 HOH A 176 176 176 HOH HOH . F 5 HOH A 177 177 177 HOH HOH . F 5 HOH A 178 178 178 HOH HOH . F 5 HOH A 179 179 179 HOH HOH . F 5 HOH A 180 180 180 HOH HOH . F 5 HOH A 181 181 181 HOH HOH . F 5 HOH A 182 182 182 HOH HOH . F 5 HOH A 183 183 183 HOH HOH . F 5 HOH A 184 184 184 HOH HOH . F 5 HOH A 185 185 185 HOH HOH . F 5 HOH A 186 186 186 HOH HOH . F 5 HOH A 187 187 187 HOH HOH . F 5 HOH A 188 188 188 HOH HOH . F 5 HOH A 189 189 189 HOH HOH . F 5 HOH A 190 190 190 HOH HOH . F 5 HOH A 191 191 191 HOH HOH . F 5 HOH A 192 192 192 HOH HOH . F 5 HOH A 193 193 193 HOH HOH . F 5 HOH A 194 194 194 HOH HOH . F 5 HOH A 195 195 195 HOH HOH . F 5 HOH A 196 196 196 HOH HOH . F 5 HOH A 197 197 197 HOH HOH . F 5 HOH A 198 198 198 HOH HOH . F 5 HOH A 199 199 199 HOH HOH . F 5 HOH A 200 200 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 KSS . . . E 4 25.913 38.046 9.743 1 43.1 ? C1 KSS 513 A 1 HETATM 2 N N2 KSS . . . E 4 25.347 37.208 8.867 1 46.3 ? N2 KSS 513 A 1 HETATM 3 C C3 KSS . . . E 4 23.936 37.416 8.64 1 42.3 ? C3 KSS 513 A 1 HETATM 4 C C4 KSS . . . E 4 23.744 38.553 9.606 1 42.5 ? C4 KSS 513 A 1 HETATM 5 N N5 KSS . . . E 4 24.943 38.863 10.191 1 39.56 ? N5 KSS 513 A 1 HETATM 6 C C6 KSS . . . E 4 27.257 37.953 10.031 1 45.86 ? C6 KSS 513 A 1 HETATM 7 C C7 KSS . . . E 4 27.977 36.968 9.383 1 48.12 ? C7 KSS 513 A 1 HETATM 8 N N8 KSS . . . E 4 27.347 36.14 8.513 1 48.95 ? N8 KSS 513 A 1 HETATM 9 C C9 KSS . . . E 4 26.032 36.259 8.243 1 47.2 ? C9 KSS 513 A 1 HETATM 10 S S12 KSS . . . E 4 25.264 35.239 7.113 1 49.88 ? S12 KSS 513 A 1 HETATM 11 C C13 KSS . . . E 4 26.456 34.054 6.566 1 50.68 ? C13 KSS 513 A 1 HETATM 12 C C14 KSS . . . E 4 27.614 34.751 5.883 1 47.27 ? C14 KSS 513 A 1 HETATM 13 C C21 KSS . . . E 4 29.434 36.796 9.622 1 47.45 ? C21 KSS 513 A 1 HETATM 14 C C22 KSS . . . E 4 30.127 37.59 10.541 1 47.94 ? C22 KSS 513 A 1 HETATM 15 C C23 KSS . . . E 4 31.5 37.409 10.74 1 51.07 ? C23 KSS 513 A 1 HETATM 16 C C24 KSS . . . E 4 32.211 36.446 10.009 1 54.7 ? C24 KSS 513 A 1 HETATM 17 C C25 KSS . . . E 4 31.459 35.631 8.994 1 52.9 ? C25 KSS 513 A 1 HETATM 18 C C26 KSS . . . E 4 30.091 35.838 8.852 1 50.05 ? C26 KSS 513 A 1 HETATM 19 O O30 KSS . . . E 4 33.571 36.283 10.242 1 57.23 ? O30 KSS 513 A 1 HETATM 20 O O31 KSS . . . E 4 32.061 34.651 8.239 1 53.58 ? O31 KSS 513 A 1 HETATM 21 C C32 KSS . . . E 4 34.367 35.262 9.621 1 57.16 ? C32 KSS 513 A 1 HETATM 22 C C36 KSS . . . E 4 32.178 34.745 6.817 1 53.18 ? C36 KSS 513 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 22 #