data_3ADU # _model_server_result.job_id u2egnJc_ZJowzCgUbS5ZnQ _model_server_result.datetime_utc '2024-11-27 06:20:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3adu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2}' # _entry.id 3ADU # _exptl.entry_id 3ADU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 205.21 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(5-methoxy-1H-indol-3-yl)acetic acid' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.03 _cell.angle_gamma 90 _cell.entry_id 3ADU _cell.length_a 92.952 _cell.length_b 60.603 _cell.length_c 118.193 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ADU _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,C,D,H 2 1 B,E,F,G,I 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.476 30.3015 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'C11 H11 N O3' _chem_comp.formula_weight 205.21 _chem_comp.id MYI _chem_comp.mon_nstd_flag . _chem_comp.name '(5-methoxy-1H-indol-3-yl)acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '5-methoxy-indole acetate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA OAJ MYI sing 237 n n OAB CAK MYI doub 238 n n OAC CAK MYI sing 239 n n CAD CAE MYI doub 240 n y CAD CAL MYI sing 241 n y CAE CAN MYI sing 242 n y CAF NAI MYI sing 243 n y CAF CAM MYI doub 244 n y CAG CAL MYI doub 245 n y CAG CAO MYI sing 246 n y CAH CAK MYI sing 247 n n CAH CAM MYI sing 248 n n NAI CAN MYI sing 249 n y OAJ CAL MYI sing 250 n n CAM CAO MYI sing 251 n y CAN CAO MYI doub 252 n y CAA HAA MYI sing 253 n n CAA HAAA MYI sing 254 n n CAA HAAB MYI sing 255 n n OAC HOAC MYI sing 256 n n CAD HAD MYI sing 257 n n CAE HAE MYI sing 258 n n CAF HAF MYI sing 259 n n CAG HAG MYI sing 260 n n CAH HAH MYI sing 261 n n CAH HAHA MYI sing 262 n n NAI HNAI MYI sing 263 n n # _atom_sites.entry_id 3ADU _atom_sites.fract_transf_matrix[1][1] 0.010758 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002688 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008721 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYI A 1 1 1 MYI MYI . D 2 MYI A 1 2 2 MYI MYI . E 2 MYI B 1 3 3 MYI MYI . F 2 MYI B 1 4 4 MYI MYI . G 2 MYI B 1 5 5 MYI MYI . H 3 HOH A 1 1001 1001 HOH HOH . H 3 HOH A 2 1002 1002 HOH HOH . H 3 HOH A 3 1003 1003 HOH HOH . H 3 HOH A 4 1004 1004 HOH HOH . H 3 HOH A 5 1009 1009 HOH HOH . H 3 HOH A 6 1010 1010 HOH HOH . H 3 HOH A 7 1011 1011 HOH HOH . H 3 HOH A 8 1012 1012 HOH HOH . H 3 HOH A 9 1013 1013 HOH HOH . H 3 HOH A 10 1014 1014 HOH HOH . H 3 HOH A 11 1021 1021 HOH HOH . H 3 HOH A 12 1023 1023 HOH HOH . H 3 HOH A 13 1026 1026 HOH HOH . H 3 HOH A 14 1032 1032 HOH HOH . H 3 HOH A 15 1033 1033 HOH HOH . H 3 HOH A 16 1037 1037 HOH HOH . H 3 HOH A 17 1038 1038 HOH HOH . H 3 HOH A 18 1041 1041 HOH HOH . H 3 HOH A 19 1047 1047 HOH HOH . H 3 HOH A 20 1048 1048 HOH HOH . H 3 HOH A 21 1053 1053 HOH HOH . H 3 HOH A 22 1054 1054 HOH HOH . H 3 HOH A 23 1055 1055 HOH HOH . H 3 HOH A 24 1056 1056 HOH HOH . H 3 HOH A 25 1059 1059 HOH HOH . H 3 HOH A 26 1064 1064 HOH HOH . H 3 HOH A 27 1065 1065 HOH HOH . H 3 HOH A 28 1066 1066 HOH HOH . H 3 HOH A 29 1067 1067 HOH HOH . H 3 HOH A 30 1070 1070 HOH HOH . H 3 HOH A 31 1071 1071 HOH HOH . H 3 HOH A 32 1072 1072 HOH HOH . H 3 HOH A 33 1074 1074 HOH HOH . H 3 HOH A 34 1075 1075 HOH HOH . H 3 HOH A 35 1076 1076 HOH HOH . H 3 HOH A 36 1077 1077 HOH HOH . H 3 HOH A 37 1078 1078 HOH HOH . H 3 HOH A 38 1081 1081 HOH HOH . H 3 HOH A 39 1082 1082 HOH HOH . H 3 HOH A 40 1087 1087 HOH HOH . H 3 HOH A 41 1089 1089 HOH HOH . H 3 HOH A 42 1091 1091 HOH HOH . H 3 HOH A 43 1093 1093 HOH HOH . H 3 HOH A 44 1094 1094 HOH HOH . H 3 HOH A 45 1096 1096 HOH HOH . H 3 HOH A 46 1097 1097 HOH HOH . H 3 HOH A 47 1098 1098 HOH HOH . H 3 HOH A 48 1099 1099 HOH HOH . H 3 HOH A 49 1102 1102 HOH HOH . H 3 HOH A 50 1104 1104 HOH HOH . H 3 HOH A 51 1106 1106 HOH HOH . H 3 HOH A 52 1107 1107 HOH HOH . H 3 HOH A 53 1108 1108 HOH HOH . H 3 HOH A 54 1109 1109 HOH HOH . H 3 HOH A 55 1111 1111 HOH HOH . H 3 HOH A 56 1112 1112 HOH HOH . H 3 HOH A 57 1113 1113 HOH HOH . H 3 HOH A 58 1123 1123 HOH HOH . H 3 HOH A 59 1125 1125 HOH HOH . H 3 HOH A 60 1128 1128 HOH HOH . H 3 HOH A 61 1132 1132 HOH HOH . H 3 HOH A 62 1138 1138 HOH HOH . H 3 HOH A 63 1143 1143 HOH HOH . H 3 HOH A 64 1148 1148 HOH HOH . I 3 HOH B 1 1006 1006 HOH HOH . I 3 HOH B 2 1007 1007 HOH HOH . I 3 HOH B 3 1008 1008 HOH HOH . I 3 HOH B 4 1016 1016 HOH HOH . I 3 HOH B 5 1017 1017 HOH HOH . I 3 HOH B 6 1018 1018 HOH HOH . I 3 HOH B 7 1019 1019 HOH HOH . I 3 HOH B 8 1020 1020 HOH HOH . I 3 HOH B 9 1025 1025 HOH HOH . I 3 HOH B 10 1027 1027 HOH HOH . I 3 HOH B 11 1028 1028 HOH HOH . I 3 HOH B 12 1029 1029 HOH HOH . I 3 HOH B 13 1035 1035 HOH HOH . I 3 HOH B 14 1036 1036 HOH HOH . I 3 HOH B 15 1042 1042 HOH HOH . I 3 HOH B 16 1044 1044 HOH HOH . I 3 HOH B 17 1045 1045 HOH HOH . I 3 HOH B 18 1046 1046 HOH HOH . I 3 HOH B 19 1052 1052 HOH HOH . I 3 HOH B 20 1058 1058 HOH HOH . I 3 HOH B 21 1061 1061 HOH HOH . I 3 HOH B 22 1069 1069 HOH HOH . I 3 HOH B 23 1073 1073 HOH HOH . I 3 HOH B 24 1080 1080 HOH HOH . I 3 HOH B 25 1083 1083 HOH HOH . I 3 HOH B 26 1084 1084 HOH HOH . I 3 HOH B 27 1086 1086 HOH HOH . I 3 HOH B 28 1088 1088 HOH HOH . I 3 HOH B 29 1101 1101 HOH HOH . I 3 HOH B 30 1103 1103 HOH HOH . I 3 HOH B 31 1105 1105 HOH HOH . I 3 HOH B 32 1110 1110 HOH HOH . I 3 HOH B 33 1115 1115 HOH HOH . I 3 HOH B 34 1116 1116 HOH HOH . I 3 HOH B 35 1122 1122 HOH HOH . I 3 HOH B 36 1126 1126 HOH HOH . I 3 HOH B 37 1129 1129 HOH HOH . I 3 HOH B 38 1131 1131 HOH HOH . I 3 HOH B 39 1145 1145 HOH HOH . I 3 HOH B 40 1147 1147 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA MYI . . . D 2 17.745 61.587 16.26 1 71.81 ? CAA MYI 2 A 1 HETATM 2 O OAB MYI . . . D 2 18.155 64.921 20.554 1 64.21 ? OAB MYI 2 A 1 HETATM 3 O OAC MYI . . . D 2 20.282 65.455 20.828 1 63.15 ? OAC MYI 2 A 1 HETATM 4 C CAD MYI . . . D 2 20.898 63.229 15.073 1 69.01 ? CAD MYI 2 A 1 HETATM 5 C CAE MYI . . . D 2 21.723 64.383 15.264 1 67.72 ? CAE MYI 2 A 1 HETATM 6 C CAF MYI . . . D 2 21.199 66.989 17.661 1 65.53 ? CAF MYI 2 A 1 HETATM 7 C CAG MYI . . . D 2 19.373 63.988 16.9 1 68.89 ? CAG MYI 2 A 1 HETATM 8 C CAH MYI . . . D 2 19.084 66.501 19.038 1 64.29 ? CAH MYI 2 A 1 HETATM 9 N NAI MYI . . . D 2 21.912 66.458 16.672 1 65.74 ? NAI MYI 2 A 1 HETATM 10 O OAJ MYI . . . D 2 19.01 61.879 15.602 1 71.38 ? OAJ MYI 2 A 1 HETATM 11 C CAK MYI . . . D 2 19.182 65.542 20.244 1 63.96 ? CAK MYI 2 A 1 HETATM 12 C CAL MYI . . . D 2 19.724 63.018 15.879 1 69.75 ? CAL MYI 2 A 1 HETATM 13 C CAM MYI . . . D 2 20.146 66.229 17.957 1 66.29 ? CAM MYI 2 A 1 HETATM 14 C CAN MYI . . . D 2 21.358 65.33 16.278 1 66.42 ? CAN MYI 2 A 1 HETATM 15 C CAO MYI . . . D 2 20.195 65.137 17.09 1 67.65 ? CAO MYI 2 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #