data_3ADW
#
_model_server_result.job_id            IOZ1IvaygjknW1iVWDI4LA 
_model_server_result.datetime_utc      '2024-11-23 13:27:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3adw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1}' 
#
_entry.id    3ADW 
#
_exptl.entry_id    3ADW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              318.45 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(5E,8E,11Z,13E)-15-oxoicosa-5,8,11,13-tetraenoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.84 
_cell.angle_gamma         90 
_cell.entry_id            3ADW 
_cell.length_a            93.034 
_cell.length_b            61.181 
_cell.length_c            118.475 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3ADW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G 1 1 
A,C,D,F 2 1 
B,E,G 2 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.517 30.5905 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 D C9 OCR . A OCR 1 1_555 A SG CYS 95 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.861 ? 
covale ? covale2 E C9 OCR . B OCR 2 1_555 B SG CYS 95 B CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.858 ? 
#
_chem_comp.formula           'C20 H30 O3' 
_chem_comp.formula_weight    318.45 
_chem_comp.id                OCR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(5E,8E,11Z,13E)-15-oxoicosa-5,8,11,13-tetraenoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '15-oxo-eicosatetraenoic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 OCR sing 264 n n 
C2 C3 OCR sing 265 n n 
C3 C4 OCR sing 266 n n 
C4 C5 OCR sing 267 n n 
C5 C6 OCR sing 268 n n 
C6 O7 OCR doub 269 n n 
C6 C8 OCR sing 270 n n 
C8 C9 OCR doub 271 n n 
C9 C11 OCR sing 272 n n 
C11 C12 OCR doub 273 n n 
C12 C13 OCR sing 274 n n 
C13 C14 OCR sing 275 n n 
C14 C15 OCR doub 276 n n 
C15 C16 OCR sing 277 n n 
C16 C17 OCR sing 278 n n 
C17 C18 OCR doub 279 n n 
C18 C19 OCR sing 280 n n 
C19 C20 OCR sing 281 n n 
C20 C21 OCR sing 282 e n 
C21 C22 OCR sing 283 n n 
C22 O23 OCR sing 284 n n 
C22 O24 OCR doub 285 n n 
C1 H1 OCR sing 286 z n 
C1 H1A OCR sing 287 n n 
C1 H1B OCR sing 288 n n 
C2 H2 OCR sing 289 n n 
C2 H2A OCR sing 290 n n 
C3 H3 OCR sing 291 n n 
C3 H3A OCR sing 292 n n 
C4 H4 OCR sing 293 e n 
C4 H4A OCR sing 294 n n 
C5 H5 OCR sing 295 n n 
C5 H5A OCR sing 296 n n 
C8 H8 OCR sing 297 n n 
C9 H9 OCR sing 298 n n 
C11 H11 OCR sing 299 n n 
C12 H12 OCR sing 300 e n 
C13 H13 OCR sing 301 n n 
C13 H13A OCR sing 302 n n 
C14 H14 OCR sing 303 n n 
C15 H15 OCR sing 304 n n 
C16 H16 OCR sing 305 n n 
C16 H16A OCR sing 306 n n 
C17 H17 OCR sing 307 n n 
C18 H18 OCR sing 308 n n 
C19 H19 OCR sing 309 n n 
C19 H19A OCR sing 310 n n 
C20 H20 OCR sing 311 n n 
C20 H20A OCR sing 312 n n 
C21 H21 OCR sing 313 n n 
C21 H21A OCR sing 314 n n 
O23 HO23 OCR sing 315 n n 
#
_atom_sites.entry_id                     3ADW 
_atom_sites.fract_transf_matrix[1][1]    0.010749 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00245 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016345 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008657 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MYI A 1 3 3 MYI MYI . 
D 3 OCR A 1 1 1 OCR OCR . 
E 3 OCR B 1 2 2 OCR OCR . 
F 4 HOH A 1 1002 1002 HOH HOH . 
F 4 HOH A 2 1004 1004 HOH HOH . 
F 4 HOH A 3 1005 1005 HOH HOH . 
F 4 HOH A 4 1006 1006 HOH HOH . 
F 4 HOH A 5 1008 1008 HOH HOH . 
F 4 HOH A 6 1009 1009 HOH HOH . 
F 4 HOH A 7 1010 1010 HOH HOH . 
F 4 HOH A 8 1011 1011 HOH HOH . 
F 4 HOH A 9 1013 1013 HOH HOH . 
F 4 HOH A 10 1014 1014 HOH HOH . 
F 4 HOH A 11 1015 1015 HOH HOH . 
F 4 HOH A 12 1018 1018 HOH HOH . 
F 4 HOH A 13 1020 1020 HOH HOH . 
F 4 HOH A 14 1021 1021 HOH HOH . 
F 4 HOH A 15 1022 1022 HOH HOH . 
F 4 HOH A 16 1034 1034 HOH HOH . 
F 4 HOH A 17 1035 1035 HOH HOH . 
F 4 HOH A 18 1040 1040 HOH HOH . 
F 4 HOH A 19 1041 1041 HOH HOH . 
F 4 HOH A 20 1045 1045 HOH HOH . 
F 4 HOH A 21 1046 1046 HOH HOH . 
F 4 HOH A 22 1049 1049 HOH HOH . 
F 4 HOH A 23 1052 1052 HOH HOH . 
F 4 HOH A 24 1053 1053 HOH HOH . 
F 4 HOH A 25 1055 1055 HOH HOH . 
F 4 HOH A 26 1057 1057 HOH HOH . 
F 4 HOH A 27 1058 1058 HOH HOH . 
F 4 HOH A 28 1059 1059 HOH HOH . 
F 4 HOH A 29 1061 1061 HOH HOH . 
F 4 HOH A 30 1063 1063 HOH HOH . 
F 4 HOH A 31 1064 1064 HOH HOH . 
F 4 HOH A 32 1066 1066 HOH HOH . 
F 4 HOH A 33 1071 1071 HOH HOH . 
F 4 HOH A 34 1073 1073 HOH HOH . 
F 4 HOH A 35 1074 1074 HOH HOH . 
F 4 HOH A 36 1076 1076 HOH HOH . 
F 4 HOH A 37 1077 1077 HOH HOH . 
F 4 HOH A 38 1078 1078 HOH HOH . 
F 4 HOH A 39 1083 1083 HOH HOH . 
F 4 HOH A 40 1084 1084 HOH HOH . 
F 4 HOH A 41 1088 1088 HOH HOH . 
F 4 HOH A 42 1089 1089 HOH HOH . 
F 4 HOH A 43 1094 1094 HOH HOH . 
F 4 HOH A 44 1095 1095 HOH HOH . 
F 4 HOH A 45 1102 1102 HOH HOH . 
F 4 HOH A 46 1103 1103 HOH HOH . 
F 4 HOH A 47 1104 1104 HOH HOH . 
F 4 HOH A 48 1110 1110 HOH HOH . 
F 4 HOH A 49 1113 1113 HOH HOH . 
F 4 HOH A 50 1114 1114 HOH HOH . 
F 4 HOH A 51 1116 1116 HOH HOH . 
F 4 HOH A 52 1117 1117 HOH HOH . 
F 4 HOH A 53 1120 1120 HOH HOH . 
F 4 HOH A 54 1121 1121 HOH HOH . 
F 4 HOH A 55 1129 1129 HOH HOH . 
F 4 HOH A 56 1130 1130 HOH HOH . 
F 4 HOH A 57 1131 1131 HOH HOH . 
F 4 HOH A 58 1134 1134 HOH HOH . 
F 4 HOH A 59 1135 1135 HOH HOH . 
G 4 HOH B 1 1001 1001 HOH HOH . 
G 4 HOH B 2 1003 1003 HOH HOH . 
G 4 HOH B 3 1007 1007 HOH HOH . 
G 4 HOH B 4 1012 1012 HOH HOH . 
G 4 HOH B 5 1016 1016 HOH HOH . 
G 4 HOH B 6 1017 1017 HOH HOH . 
G 4 HOH B 7 1019 1019 HOH HOH . 
G 4 HOH B 8 1023 1023 HOH HOH . 
G 4 HOH B 9 1024 1024 HOH HOH . 
G 4 HOH B 10 1025 1025 HOH HOH . 
G 4 HOH B 11 1026 1026 HOH HOH . 
G 4 HOH B 12 1027 1027 HOH HOH . 
G 4 HOH B 13 1028 1028 HOH HOH . 
G 4 HOH B 14 1029 1029 HOH HOH . 
G 4 HOH B 15 1030 1030 HOH HOH . 
G 4 HOH B 16 1031 1031 HOH HOH . 
G 4 HOH B 17 1032 1032 HOH HOH . 
G 4 HOH B 18 1036 1036 HOH HOH . 
G 4 HOH B 19 1037 1037 HOH HOH . 
G 4 HOH B 20 1038 1038 HOH HOH . 
G 4 HOH B 21 1039 1039 HOH HOH . 
G 4 HOH B 22 1042 1042 HOH HOH . 
G 4 HOH B 23 1043 1043 HOH HOH . 
G 4 HOH B 24 1044 1044 HOH HOH . 
G 4 HOH B 25 1047 1047 HOH HOH . 
G 4 HOH B 26 1048 1048 HOH HOH . 
G 4 HOH B 27 1050 1050 HOH HOH . 
G 4 HOH B 28 1051 1051 HOH HOH . 
G 4 HOH B 29 1054 1054 HOH HOH . 
G 4 HOH B 30 1056 1056 HOH HOH . 
G 4 HOH B 31 1060 1060 HOH HOH . 
G 4 HOH B 32 1062 1062 HOH HOH . 
G 4 HOH B 33 1065 1065 HOH HOH . 
G 4 HOH B 34 1067 1067 HOH HOH . 
G 4 HOH B 35 1068 1068 HOH HOH . 
G 4 HOH B 36 1069 1069 HOH HOH . 
G 4 HOH B 37 1070 1070 HOH HOH . 
G 4 HOH B 38 1072 1072 HOH HOH . 
G 4 HOH B 39 1075 1075 HOH HOH . 
G 4 HOH B 40 1079 1079 HOH HOH . 
G 4 HOH B 41 1080 1080 HOH HOH . 
G 4 HOH B 42 1081 1081 HOH HOH . 
G 4 HOH B 43 1082 1082 HOH HOH . 
G 4 HOH B 44 1085 1085 HOH HOH . 
G 4 HOH B 45 1092 1092 HOH HOH . 
G 4 HOH B 46 1093 1093 HOH HOH . 
G 4 HOH B 47 1096 1096 HOH HOH . 
G 4 HOH B 48 1097 1097 HOH HOH . 
G 4 HOH B 49 1098 1098 HOH HOH . 
G 4 HOH B 50 1099 1099 HOH HOH . 
G 4 HOH B 51 1100 1100 HOH HOH . 
G 4 HOH B 52 1105 1105 HOH HOH . 
G 4 HOH B 53 1106 1106 HOH HOH . 
G 4 HOH B 54 1109 1109 HOH HOH . 
G 4 HOH B 55 1118 1118 HOH HOH . 
G 4 HOH B 56 1119 1119 HOH HOH . 
G 4 HOH B 57 1123 1123 HOH HOH . 
G 4 HOH B 58 1126 1126 HOH HOH . 
G 4 HOH B 59 1132 1132 HOH HOH . 
G 4 HOH B 60 1133 1133 HOH HOH . 
G 4 HOH B 61 1137 1137 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OCR . . . D 3 18.302 73.372 6.838 1 80.66 ? C1 OCR 1 A 1 
HETATM 2 C C2 OCR . . . D 3 17.478 72.144 6.454 1 80.94 ? C2 OCR 1 A 1 
HETATM 3 C C3 OCR . . . D 3 17.063 71.354 7.688 1 80.72 ? C3 OCR 1 A 1 
HETATM 4 C C4 OCR . . . D 3 17.83 70.023 7.78 1 80.64 ? C4 OCR 1 A 1 
HETATM 5 C C5 OCR . . . D 3 18 69.644 9.124 1 79.62 ? C5 OCR 1 A 1 
HETATM 6 C C6 OCR . . . D 3 17.122 68.439 9.513 1 78.86 ? C6 OCR 1 A 1 
HETATM 7 O O7 OCR . . . D 3 15.92 68.587 9.771 1 78.37 ? O7 OCR 1 A 1 
HETATM 8 C C8 OCR . . . D 3 17.745 67.037 9.564 1 77 ? C8 OCR 1 A 1 
HETATM 9 C C9 OCR . . . D 3 17.971 66.501 11.003 1 74.91 ? C9 OCR 1 A 1 
HETATM 10 C C11 OCR . . . D 3 18.562 65.113 10.86 1 77.37 ? C11 OCR 1 A 1 
HETATM 11 C C12 OCR . . . D 3 17.967 63.995 11.231 1 76.65 ? C12 OCR 1 A 1 
HETATM 12 C C13 OCR . . . D 3 16.583 63.821 11.881 1 78.41 ? C13 OCR 1 A 1 
HETATM 13 C C14 OCR . . . D 3 16.638 63.951 13.393 1 80.88 ? C14 OCR 1 A 1 
HETATM 14 C C15 OCR . . . D 3 15.75 63.385 14.203 1 82.14 ? C15 OCR 1 A 1 
HETATM 15 C C16 OCR . . . D 3 14.594 62.552 13.699 1 83.73 ? C16 OCR 1 A 1 
HETATM 16 C C17 OCR . . . D 3 13.321 62.974 14.391 1 85.14 ? C17 OCR 1 A 1 
HETATM 17 C C18 OCR . . . D 3 12.114 62.642 13.944 1 87.31 ? C18 OCR 1 A 1 
HETATM 18 C C19 OCR . . . D 3 11.867 61.808 12.698 1 87.79 ? C19 OCR 1 A 1 
HETATM 19 C C20 OCR . . . D 3 10.38 61.426 12.589 1 88.79 ? C20 OCR 1 A 1 
HETATM 20 C C21 OCR . . . D 3 10.175 59.913 12.708 1 89.42 ? C21 OCR 1 A 1 
HETATM 21 C C22 OCR . . . D 3 8.684 59.532 12.634 1 89.88 ? C22 OCR 1 A 1 
HETATM 22 O O23 OCR . . . D 3 8.366 58.624 11.824 1 90.28 ? O23 OCR 1 A 1 
HETATM 23 O O24 OCR . . . D 3 7.888 60.143 13.389 1 89.93 ? O24 OCR 1 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           23 
#