data_3ADX # _model_server_result.job_id 9ygH4i-_zXa2uS54NDEcQQ _model_server_result.datetime_utc '2024-11-27 03:04:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3adx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3ADX # _exptl.entry_id 3ADX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 301.294 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[5-(2-nitropent-1-en-1-yl)furan-2-yl]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.85 _cell.angle_gamma 90 _cell.entry_id 3ADX _cell.length_a 93.051 _cell.length_b 61.742 _cell.length_c 118.48 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ADX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,C,D,F 2 1 B,E,G 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.5255 30.871 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id C8 _struct_conn.ptnr1_label_comp_id NRO _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id NRO _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 95 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 285 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.849 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H15 N O5' _chem_comp.formula_weight 301.294 _chem_comp.id NRO _chem_comp.mon_nstd_flag . _chem_comp.name '3-[5-(2-nitropent-1-en-1-yl)furan-2-yl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NRO sing 280 n n C2 C3 NRO sing 281 n n C3 C4 NRO sing 282 n n C4 C8 NRO doub 283 n n C4 N5 NRO sing 284 n n C8 C10 NRO sing 285 n n C10 O11 NRO sing 286 n y C10 C12 NRO doub 287 n y C14 C15 NRO sing 288 n y C14 O11 NRO sing 289 n y C14 C13 NRO doub 290 z y C15 C16 NRO doub 291 n y C15 C17 NRO sing 292 n y C16 C20 NRO sing 293 n y C17 C18 NRO doub 294 n y C19 C20 NRO doub 295 n y C19 C18 NRO sing 296 n y C20 C21 NRO sing 297 n n C21 O22 NRO doub 298 n n C21 O23 NRO sing 299 n n N5 O6 NRO doub 300 n n N5 O7 NRO sing 301 n n C12 C13 NRO sing 302 n y C1 H1 NRO sing 303 n n C1 H1A NRO sing 304 n n C1 H1B NRO sing 305 n n C2 H2 NRO sing 306 n n C2 H2A NRO sing 307 n n C3 H3 NRO sing 308 n n C3 H3A NRO sing 309 n n C8 H8 NRO sing 310 n n C16 H16 NRO sing 311 n n C17 H17 NRO sing 312 n n C19 H19 NRO sing 313 n n C12 H12 NRO sing 314 n n C13 H13 NRO sing 315 n n C18 H18 NRO sing 316 n n O23 HO23 NRO sing 317 n n # _atom_sites.entry_id 3ADX _atom_sites.fract_transf_matrix[1][1] 0.010747 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002451 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016196 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008657 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NRO A 1 1 1 NRO NRO . D 3 IMN A 1 2 2 IMN IMN . E 3 IMN B 1 3 3 IMN IMN . F 4 HOH A 1 1002 1002 HOH HOH . F 4 HOH A 2 1003 1003 HOH HOH . F 4 HOH A 3 1004 1004 HOH HOH . F 4 HOH A 4 1005 1005 HOH HOH . F 4 HOH A 5 1007 1007 HOH HOH . F 4 HOH A 6 1008 1008 HOH HOH . F 4 HOH A 7 1012 1012 HOH HOH . F 4 HOH A 8 1014 1014 HOH HOH . F 4 HOH A 9 1016 1016 HOH HOH . F 4 HOH A 10 1017 1017 HOH HOH . F 4 HOH A 11 1018 1018 HOH HOH . F 4 HOH A 12 1019 1019 HOH HOH . F 4 HOH A 13 1023 1023 HOH HOH . F 4 HOH A 14 1025 1025 HOH HOH . F 4 HOH A 15 1030 1030 HOH HOH . F 4 HOH A 16 1032 1032 HOH HOH . F 4 HOH A 17 1033 1033 HOH HOH . F 4 HOH A 18 1034 1034 HOH HOH . F 4 HOH A 19 1036 1036 HOH HOH . F 4 HOH A 20 1039 1039 HOH HOH . F 4 HOH A 21 1042 1042 HOH HOH . F 4 HOH A 22 1044 1044 HOH HOH . F 4 HOH A 23 1045 1045 HOH HOH . F 4 HOH A 24 1047 1047 HOH HOH . F 4 HOH A 25 1050 1050 HOH HOH . F 4 HOH A 26 1051 1051 HOH HOH . F 4 HOH A 27 1052 1052 HOH HOH . F 4 HOH A 28 1053 1053 HOH HOH . F 4 HOH A 29 1055 1055 HOH HOH . F 4 HOH A 30 1057 1057 HOH HOH . F 4 HOH A 31 1058 1058 HOH HOH . F 4 HOH A 32 1060 1060 HOH HOH . F 4 HOH A 33 1061 1061 HOH HOH . F 4 HOH A 34 1062 1062 HOH HOH . F 4 HOH A 35 1064 1064 HOH HOH . F 4 HOH A 36 1065 1065 HOH HOH . F 4 HOH A 37 1066 1066 HOH HOH . F 4 HOH A 38 1067 1067 HOH HOH . F 4 HOH A 39 1068 1068 HOH HOH . F 4 HOH A 40 1070 1070 HOH HOH . G 4 HOH B 1 1001 1001 HOH HOH . G 4 HOH B 2 1006 1006 HOH HOH . G 4 HOH B 3 1009 1009 HOH HOH . G 4 HOH B 4 1010 1010 HOH HOH . G 4 HOH B 5 1011 1011 HOH HOH . G 4 HOH B 6 1013 1013 HOH HOH . G 4 HOH B 7 1015 1015 HOH HOH . G 4 HOH B 8 1020 1020 HOH HOH . G 4 HOH B 9 1021 1021 HOH HOH . G 4 HOH B 10 1022 1022 HOH HOH . G 4 HOH B 11 1024 1024 HOH HOH . G 4 HOH B 12 1026 1026 HOH HOH . G 4 HOH B 13 1027 1027 HOH HOH . G 4 HOH B 14 1028 1028 HOH HOH . G 4 HOH B 15 1029 1029 HOH HOH . G 4 HOH B 16 1031 1031 HOH HOH . G 4 HOH B 17 1035 1035 HOH HOH . G 4 HOH B 18 1037 1037 HOH HOH . G 4 HOH B 19 1038 1038 HOH HOH . G 4 HOH B 20 1040 1040 HOH HOH . G 4 HOH B 21 1041 1041 HOH HOH . G 4 HOH B 22 1043 1043 HOH HOH . G 4 HOH B 23 1046 1046 HOH HOH . G 4 HOH B 24 1048 1048 HOH HOH . G 4 HOH B 25 1049 1049 HOH HOH . G 4 HOH B 26 1054 1054 HOH HOH . G 4 HOH B 27 1056 1056 HOH HOH . G 4 HOH B 28 1059 1059 HOH HOH . G 4 HOH B 29 1063 1063 HOH HOH . G 4 HOH B 30 1069 1069 HOH HOH . G 4 HOH B 31 1071 1071 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NRO . . . C 2 14.127 63.705 14.589 1 77.51 ? C1 NRO 1 A 1 HETATM 2 C C2 NRO . . . C 2 15.256 63.298 13.643 1 77.88 ? C2 NRO 1 A 1 HETATM 3 C C3 NRO . . . C 2 16.319 64.411 13.498 1 78.23 ? C3 NRO 1 A 1 HETATM 4 C C4 NRO . . . C 2 17.451 63.976 12.549 1 78.27 ? C4 NRO 1 A 1 HETATM 5 C C8 NRO . . . C 2 18.624 65.017 12.43 1 77.23 ? C8 NRO 1 A 1 HETATM 6 C C10 NRO . . . C 2 18.588 65.764 11.07 1 78.61 ? C10 NRO 1 A 1 HETATM 7 C C14 NRO . . . C 2 18.102 67.181 9.494 1 80.49 ? C14 NRO 1 A 1 HETATM 8 C C15 NRO . . . C 2 17.49 68.28 8.857 1 80.65 ? C15 NRO 1 A 1 HETATM 9 C C16 NRO . . . C 2 18.291 69.237 8.134 1 81.32 ? C16 NRO 1 A 1 HETATM 10 C C17 NRO . . . C 2 16.073 68.453 8.932 1 81.38 ? C17 NRO 1 A 1 HETATM 11 C C19 NRO . . . C 2 16.224 70.506 7.585 1 82.5 ? C19 NRO 1 A 1 HETATM 12 C C20 NRO . . . C 2 17.662 70.365 7.487 1 82.58 ? C20 NRO 1 A 1 HETATM 13 C C21 NRO . . . C 2 18.503 71.408 6.704 1 83.46 ? C21 NRO 1 A 1 HETATM 14 N N5 NRO . . . C 2 16.902 63.685 11.184 1 80.33 ? N5 NRO 1 A 1 HETATM 15 O O6 NRO . . . C 2 17.558 62.717 10.386 1 82.12 ? O6 NRO 1 A 1 HETATM 16 O O7 NRO . . . C 2 15.742 64.348 10.664 1 81.08 ? O7 NRO 1 A 1 HETATM 17 O O11 NRO . . . C 2 17.825 66.856 10.798 1 80.88 ? O11 NRO 1 A 1 HETATM 18 C C12 NRO . . . C 2 19.301 65.423 9.996 1 79.37 ? C12 NRO 1 A 1 HETATM 19 C C13 NRO . . . C 2 19.002 66.295 9.025 1 79.99 ? C13 NRO 1 A 1 HETATM 20 C C18 NRO . . . C 2 15.428 69.557 8.301 1 82.17 ? C18 NRO 1 A 1 HETATM 21 O O22 NRO . . . C 2 19.748 71.269 6.629 1 84.07 ? O22 NRO 1 A 1 HETATM 22 O O23 NRO . . . C 2 17.916 72.379 6.154 1 84.29 ? O23 NRO 1 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 22 #