data_3ADX # _model_server_result.job_id WZQrTCdDg4W6A_GqeXeT6w _model_server_result.datetime_utc '2024-11-23 10:46:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3adx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2}' # _entry.id 3ADX # _exptl.entry_id 3ADX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 357.788 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description INDOMETHACIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.85 _cell.angle_gamma 90 _cell.entry_id 3ADX _cell.length_a 93.051 _cell.length_b 61.742 _cell.length_c 118.48 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ADX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,C,D,F 2 1 B,E,G 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.5255 30.871 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id C8 _struct_conn.ptnr1_label_comp_id NRO _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id NRO _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 95 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 285 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.849 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H16 Cl N O4' _chem_comp.formula_weight 357.788 _chem_comp.id IMN _chem_comp.mon_nstd_flag . _chem_comp.name INDOMETHACIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 IMN doub 173 n y C C5 IMN sing 174 n y C N IMN sing 175 n y C1 C2 IMN sing 176 n y C1 C7 IMN sing 177 n y C2 C3 IMN doub 178 n y C2 H2 IMN sing 179 n n C3 C4 IMN sing 180 n y C3 O IMN sing 181 n n C4 C5 IMN doub 182 n y C4 H4 IMN sing 183 n n C5 H5 IMN sing 184 n n C6 O IMN sing 185 n n C6 H61 IMN sing 186 n n C6 H62 IMN sing 187 n n C6 H63 IMN sing 188 n n C7 C8 IMN doub 189 n y C7 C17 IMN sing 190 n n C8 C16 IMN sing 191 n n C8 N IMN sing 192 n y C9 C10 IMN sing 193 n n C9 N IMN sing 194 n n C9 O1 IMN doub 195 n n C10 C11 IMN doub 196 n y C10 C15 IMN sing 197 n y C11 C12 IMN sing 198 n y C11 H11 IMN sing 199 n n C12 C13 IMN doub 200 n y C12 H12 IMN sing 201 n n C13 C14 IMN sing 202 n y C13 CL IMN sing 203 n n C14 C15 IMN doub 204 n y C14 H14 IMN sing 205 n n C15 H15 IMN sing 206 n n C16 H161 IMN sing 207 n n C16 H162 IMN sing 208 n n C16 H163 IMN sing 209 n n C17 C18 IMN sing 210 n n C17 H171 IMN sing 211 n n C17 H172 IMN sing 212 n n C18 O2 IMN doub 213 n n C18 O3 IMN sing 214 n n O3 HO3 IMN sing 215 n n # _atom_sites.entry_id 3ADX _atom_sites.fract_transf_matrix[1][1] 0.010747 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002451 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016196 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008657 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NRO A 1 1 1 NRO NRO . D 3 IMN A 1 2 2 IMN IMN . E 3 IMN B 1 3 3 IMN IMN . F 4 HOH A 1 1002 1002 HOH HOH . F 4 HOH A 2 1003 1003 HOH HOH . F 4 HOH A 3 1004 1004 HOH HOH . F 4 HOH A 4 1005 1005 HOH HOH . F 4 HOH A 5 1007 1007 HOH HOH . F 4 HOH A 6 1008 1008 HOH HOH . F 4 HOH A 7 1012 1012 HOH HOH . F 4 HOH A 8 1014 1014 HOH HOH . F 4 HOH A 9 1016 1016 HOH HOH . F 4 HOH A 10 1017 1017 HOH HOH . F 4 HOH A 11 1018 1018 HOH HOH . F 4 HOH A 12 1019 1019 HOH HOH . F 4 HOH A 13 1023 1023 HOH HOH . F 4 HOH A 14 1025 1025 HOH HOH . F 4 HOH A 15 1030 1030 HOH HOH . F 4 HOH A 16 1032 1032 HOH HOH . F 4 HOH A 17 1033 1033 HOH HOH . F 4 HOH A 18 1034 1034 HOH HOH . F 4 HOH A 19 1036 1036 HOH HOH . F 4 HOH A 20 1039 1039 HOH HOH . F 4 HOH A 21 1042 1042 HOH HOH . F 4 HOH A 22 1044 1044 HOH HOH . F 4 HOH A 23 1045 1045 HOH HOH . F 4 HOH A 24 1047 1047 HOH HOH . F 4 HOH A 25 1050 1050 HOH HOH . F 4 HOH A 26 1051 1051 HOH HOH . F 4 HOH A 27 1052 1052 HOH HOH . F 4 HOH A 28 1053 1053 HOH HOH . F 4 HOH A 29 1055 1055 HOH HOH . F 4 HOH A 30 1057 1057 HOH HOH . F 4 HOH A 31 1058 1058 HOH HOH . F 4 HOH A 32 1060 1060 HOH HOH . F 4 HOH A 33 1061 1061 HOH HOH . F 4 HOH A 34 1062 1062 HOH HOH . F 4 HOH A 35 1064 1064 HOH HOH . F 4 HOH A 36 1065 1065 HOH HOH . F 4 HOH A 37 1066 1066 HOH HOH . F 4 HOH A 38 1067 1067 HOH HOH . F 4 HOH A 39 1068 1068 HOH HOH . F 4 HOH A 40 1070 1070 HOH HOH . G 4 HOH B 1 1001 1001 HOH HOH . G 4 HOH B 2 1006 1006 HOH HOH . G 4 HOH B 3 1009 1009 HOH HOH . G 4 HOH B 4 1010 1010 HOH HOH . G 4 HOH B 5 1011 1011 HOH HOH . G 4 HOH B 6 1013 1013 HOH HOH . G 4 HOH B 7 1015 1015 HOH HOH . G 4 HOH B 8 1020 1020 HOH HOH . G 4 HOH B 9 1021 1021 HOH HOH . G 4 HOH B 10 1022 1022 HOH HOH . G 4 HOH B 11 1024 1024 HOH HOH . G 4 HOH B 12 1026 1026 HOH HOH . G 4 HOH B 13 1027 1027 HOH HOH . G 4 HOH B 14 1028 1028 HOH HOH . G 4 HOH B 15 1029 1029 HOH HOH . G 4 HOH B 16 1031 1031 HOH HOH . G 4 HOH B 17 1035 1035 HOH HOH . G 4 HOH B 18 1037 1037 HOH HOH . G 4 HOH B 19 1038 1038 HOH HOH . G 4 HOH B 20 1040 1040 HOH HOH . G 4 HOH B 21 1041 1041 HOH HOH . G 4 HOH B 22 1043 1043 HOH HOH . G 4 HOH B 23 1046 1046 HOH HOH . G 4 HOH B 24 1048 1048 HOH HOH . G 4 HOH B 25 1049 1049 HOH HOH . G 4 HOH B 26 1054 1054 HOH HOH . G 4 HOH B 27 1056 1056 HOH HOH . G 4 HOH B 28 1059 1059 HOH HOH . G 4 HOH B 29 1063 1063 HOH HOH . G 4 HOH B 30 1069 1069 HOH HOH . G 4 HOH B 31 1071 1071 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C IMN . . . D 3 21.301 65.348 16.327 1 58.9 ? C IMN 2 A 1 HETATM 2 C C1 IMN . . . D 3 20.081 65.205 17.04 1 58.09 ? C1 IMN 2 A 1 HETATM 3 C C2 IMN . . . D 3 19.291 64.034 16.87 1 58.92 ? C2 IMN 2 A 1 HETATM 4 C C3 IMN . . . D 3 19.714 63.003 15.983 1 58.89 ? C3 IMN 2 A 1 HETATM 5 C C4 IMN . . . D 3 20.923 63.15 15.285 1 59.86 ? C4 IMN 2 A 1 HETATM 6 C C5 IMN . . . D 3 21.703 64.291 15.448 1 59.99 ? C5 IMN 2 A 1 HETATM 7 C C6 IMN . . . D 3 17.589 62.046 16.015 1 60.58 ? C6 IMN 2 A 1 HETATM 8 C C7 IMN . . . D 3 19.924 66.408 17.853 1 57.55 ? C7 IMN 2 A 1 HETATM 9 C C8 IMN . . . D 3 20.997 67.213 17.619 1 58.74 ? C8 IMN 2 A 1 HETATM 10 C C9 IMN . . . D 3 23.078 67.13 16.213 1 61.12 ? C9 IMN 2 A 1 HETATM 11 C C10 IMN . . . D 3 23.46 67.22 14.726 1 62.58 ? C10 IMN 2 A 1 HETATM 12 C C11 IMN . . . D 3 24.739 67.744 14.35 1 64.07 ? C11 IMN 2 A 1 HETATM 13 C C12 IMN . . . D 3 25.108 67.805 12.987 1 64.81 ? C12 IMN 2 A 1 HETATM 14 C C13 IMN . . . D 3 24.216 67.351 11.989 1 64.45 ? C13 IMN 2 A 1 HETATM 15 C C14 IMN . . . D 3 22.958 66.846 12.338 1 63.19 ? C14 IMN 2 A 1 HETATM 16 C C15 IMN . . . D 3 22.58 66.779 13.68 1 63.26 ? C15 IMN 2 A 1 HETATM 17 C C16 IMN . . . D 3 21.22 68.569 18.273 1 57.97 ? C16 IMN 2 A 1 HETATM 18 C C17 IMN . . . D 3 18.744 66.66 18.778 1 55.57 ? C17 IMN 2 A 1 HETATM 19 C C18 IMN . . . D 3 18.805 65.806 20.047 1 55.07 ? C18 IMN 2 A 1 HETATM 20 N N IMN . . . D 3 21.862 66.6 16.689 1 59.39 ? N IMN 2 A 1 HETATM 21 O O IMN . . . D 3 18.991 61.844 15.779 1 60.76 ? O IMN 2 A 1 HETATM 22 O O1 IMN . . . D 3 23.893 67.53 17.046 1 59.08 ? O1 IMN 2 A 1 HETATM 23 O O2 IMN . . . D 3 19.725 65.037 20.254 1 53.59 ? O2 IMN 2 A 1 HETATM 24 O O3 IMN . . . D 3 17.825 65.901 20.949 1 54.65 ? O3 IMN 2 A 1 HETATM 25 CL CL IMN . . . D 3 24.663 67.408 10.325 1 62.93 ? CL IMN 2 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #