data_3AE7
#
_model_server_result.job_id            lxRVI7lZd4WkuxnZvfUncQ 
_model_server_result.datetime_utc      '2024-11-28 11:15:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ae7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1305}' 
#
_entry.id    3AE7 
#
_exptl.entry_id    3AE7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          10 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3AE7 
_cell.length_a            71.175 
_cell.length_b            83.988 
_cell.length_c            293.691 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3AE7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      10 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 57 A HIS 57 1_555 E C8M FAD . A FAD 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc1 B SG CYS 65 B CYS 65 1_555 F FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
metalc ? metalc2 B SG CYS 70 B CYS 70 1_555 F FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc3 B SG CYS 73 B CYS 73 1_555 F FE1 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? 
metalc ? metalc4 B SG CYS 158 B CYS 158 1_555 G FE4 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc5 B SG CYS 161 B CYS 161 1_555 G FE1 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc6 B SG CYS 164 B CYS 164 1_555 G FE2 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc7 B SG CYS 221 B CYS 221 1_555 H FE1 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? 
metalc ? metalc8 B SG CYS 225 B CYS 225 1_555 G FE3 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? 
metalc ? metalc9 C NE2 HIS 98 C HIS 101 1_555 J FE HEM . C HEM 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc10 J FE HEM . C HEM 1305 1_555 D NE2 HIS 46 D HIS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 270 n n 
CHA C4D HEM doub 271 n n 
CHA HHA HEM sing 272 n n 
CHB C4A HEM sing 273 n n 
CHB C1B HEM doub 274 n n 
CHB HHB HEM sing 275 n n 
CHC C4B HEM sing 276 n n 
CHC C1C HEM doub 277 n n 
CHC HHC HEM sing 278 n n 
CHD C4C HEM doub 279 n n 
CHD C1D HEM sing 280 n n 
CHD HHD HEM sing 281 n n 
C1A C2A HEM doub 282 n y 
C1A NA HEM sing 283 n y 
C2A C3A HEM sing 284 n y 
C2A CAA HEM sing 285 n n 
C3A C4A HEM doub 286 n y 
C3A CMA HEM sing 287 n n 
C4A NA HEM sing 288 n y 
CMA HMA HEM sing 289 n n 
CMA HMAA HEM sing 290 n n 
CMA HMAB HEM sing 291 n n 
CAA CBA HEM sing 292 n n 
CAA HAA HEM sing 293 n n 
CAA HAAA HEM sing 294 n n 
CBA CGA HEM sing 295 n n 
CBA HBA HEM sing 296 n n 
CBA HBAA HEM sing 297 n n 
CGA O1A HEM doub 298 n n 
CGA O2A HEM sing 299 n n 
C1B C2B HEM sing 300 n n 
C1B NB HEM sing 301 n n 
C2B C3B HEM doub 302 n n 
C2B CMB HEM sing 303 n n 
C3B C4B HEM sing 304 n n 
C3B CAB HEM sing 305 n n 
C4B NB HEM doub 306 n n 
CMB HMB HEM sing 307 n n 
CMB HMBA HEM sing 308 n n 
CMB HMBB HEM sing 309 n n 
CAB CBB HEM doub 310 n n 
CAB HAB HEM sing 311 n n 
CBB HBB HEM sing 312 n n 
CBB HBBA HEM sing 313 n n 
C1C C2C HEM sing 314 n y 
C1C NC HEM sing 315 n y 
C2C C3C HEM doub 316 n y 
C2C CMC HEM sing 317 n n 
C3C C4C HEM sing 318 n y 
C3C CAC HEM sing 319 n n 
C4C NC HEM sing 320 n y 
CMC HMC HEM sing 321 n n 
CMC HMCA HEM sing 322 n n 
CMC HMCB HEM sing 323 n n 
CAC CBC HEM doub 324 n n 
CAC HAC HEM sing 325 n n 
CBC HBC HEM sing 326 n n 
CBC HBCA HEM sing 327 n n 
C1D C2D HEM sing 328 n n 
C1D ND HEM doub 329 n n 
C2D C3D HEM doub 330 n n 
C2D CMD HEM sing 331 n n 
C3D C4D HEM sing 332 n n 
C3D CAD HEM sing 333 n n 
C4D ND HEM sing 334 n n 
CMD HMD HEM sing 335 n n 
CMD HMDA HEM sing 336 n n 
CMD HMDB HEM sing 337 n n 
CAD CBD HEM sing 338 n n 
CAD HAD HEM sing 339 n n 
CAD HADA HEM sing 340 n n 
CBD CGD HEM sing 341 n n 
CBD HBD HEM sing 342 n n 
CBD HBDA HEM sing 343 n n 
CGD O1D HEM doub 344 n n 
CGD O2D HEM sing 345 n n 
O2A H2A HEM sing 346 n n 
O2D H2D HEM sing 347 n n 
FE NA HEM sing 348 n n 
FE NB HEM sing 349 n n 
FE NC HEM sing 350 n n 
FE ND HEM sing 351 n n 
#
_atom_sites.entry_id                     3AE7 
_atom_sites.fract_transf_matrix[1][1]    0.01405 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011906 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003405 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 FAD A 1 700 700 FAD FAD . 
F 6 FES B 1 302 302 FES FES . 
G 7 SF4 B 1 303 303 SF4 SF4 . 
H 8 F3S B 1 304 304 F3S F3S . 
I 9 12J B 1 1201 1201 12J 12J . 
J 10 HEM C 1 1305 1305 HEM HEM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . J 10 33.158 -26.793 -65.081 1 134.95 ? CHA HEM 1305 C 1 
HETATM 2 C CHB HEM . . . J 10 37.324 -24.354 -65.508 1 134.92 ? CHB HEM 1305 C 1 
HETATM 3 C CHC HEM . . . J 10 37.429 -25.538 -70.213 1 134.95 ? CHC HEM 1305 C 1 
HETATM 4 C CHD HEM . . . J 10 34.171 -29.027 -69.311 1 134.99 ? CHD HEM 1305 C 1 
HETATM 5 C C1A HEM . . . J 10 34.302 -26.097 -64.745 1 134.92 ? C1A HEM 1305 C 1 
HETATM 6 C C2A HEM . . . J 10 34.763 -25.754 -63.41 1 134.94 ? C2A HEM 1305 C 1 
HETATM 7 C C3A HEM . . . J 10 35.917 -25.081 -63.532 1 134.9 ? C3A HEM 1305 C 1 
HETATM 8 C C4A HEM . . . J 10 36.225 -24.972 -64.946 1 134.92 ? C4A HEM 1305 C 1 
HETATM 9 C CMA HEM . . . J 10 36.782 -24.51 -62.383 1 134.85 ? CMA HEM 1305 C 1 
HETATM 10 C CAA HEM . . . J 10 34.044 -26.111 -62.086 1 135.02 ? CAA HEM 1305 C 1 
HETATM 11 C CBA HEM . . . J 10 33.107 -24.978 -61.679 1 135.07 ? CBA HEM 1305 C 1 
HETATM 12 C CGA HEM . . . J 10 32.755 -25.108 -60.219 1 135.1 ? CGA HEM 1305 C 1 
HETATM 13 O O1A HEM . . . J 10 33.544 -24.63 -59.362 1 135.06 ? O1A HEM 1305 C 1 
HETATM 14 O O2A HEM . . . J 10 31.682 -25.69 -59.914 1 135.12 ? O2A HEM 1305 C 1 
HETATM 15 C C1B HEM . . . J 10 37.634 -24.337 -66.852 1 134.95 ? C1B HEM 1305 C 1 
HETATM 16 C C2B HEM . . . J 10 38.514 -23.403 -67.533 1 134.95 ? C2B HEM 1305 C 1 
HETATM 17 C C3B HEM . . . J 10 38.538 -23.733 -68.83 1 134.95 ? C3B HEM 1305 C 1 
HETATM 18 C C4B HEM . . . J 10 37.679 -24.886 -69.022 1 134.94 ? C4B HEM 1305 C 1 
HETATM 19 C CMB HEM . . . J 10 39.285 -22.235 -66.873 1 134.95 ? CMB HEM 1305 C 1 
HETATM 20 C CAB HEM . . . J 10 39.343 -23.02 -69.937 1 134.97 ? CAB HEM 1305 C 1 
HETATM 21 C CBB HEM . . . J 10 40.616 -23.368 -70.143 1 135.06 ? CBB HEM 1305 C 1 
HETATM 22 C C1C HEM . . . J 10 36.578 -26.611 -70.392 1 134.96 ? C1C HEM 1305 C 1 
HETATM 23 C C2C HEM . . . J 10 36.361 -27.354 -71.621 1 134.97 ? C2C HEM 1305 C 1 
HETATM 24 C C3C HEM . . . J 10 35.462 -28.315 -71.371 1 134.99 ? C3C HEM 1305 C 1 
HETATM 25 C C4C HEM . . . J 10 35.074 -28.22 -69.975 1 134.98 ? C4C HEM 1305 C 1 
HETATM 26 C CMC HEM . . . J 10 37.051 -27.076 -72.977 1 134.86 ? CMC HEM 1305 C 1 
HETATM 27 C CAC HEM . . . J 10 34.926 -29.351 -72.387 1 134.96 ? CAC HEM 1305 C 1 
HETATM 28 C CBC HEM . . . J 10 35.572 -30.509 -72.559 1 135 ? CBC HEM 1305 C 1 
HETATM 29 C C1D HEM . . . J 10 33.516 -28.73 -68.131 1 134.97 ? C1D HEM 1305 C 1 
HETATM 30 C C2D HEM . . . J 10 32.332 -29.391 -67.629 1 134.97 ? C2D HEM 1305 C 1 
HETATM 31 C C3D HEM . . . J 10 31.997 -28.704 -66.294 1 134.98 ? C3D HEM 1305 C 1 
HETATM 32 C C4D HEM . . . J 10 33.024 -27.684 -66.13 1 134.97 ? C4D HEM 1305 C 1 
HETATM 33 C CMD HEM . . . J 10 31.561 -30.554 -68.293 1 134.94 ? CMD HEM 1305 C 1 
HETATM 34 C CAD HEM . . . J 10 30.794 -29.069 -65.384 1 135.03 ? CAD HEM 1305 C 1 
HETATM 35 C CBD HEM . . . J 10 31.017 -28.743 -63.909 1 135.17 ? CBD HEM 1305 C 1 
HETATM 36 C CGD HEM . . . J 10 29.954 -27.786 -63.428 1 135.27 ? CGD HEM 1305 C 1 
HETATM 37 O O1D HEM . . . J 10 29.4 -28.024 -62.324 1 135.33 ? O1D HEM 1305 C 1 
HETATM 38 O O2D HEM . . . J 10 29.657 -26.787 -64.137 1 135.35 ? O2D HEM 1305 C 1 
HETATM 39 N NA HEM . . . J 10 35.219 -25.605 -65.652 1 134.93 ? NA HEM 1305 C 1 
HETATM 40 N NB HEM . . . J 10 37.145 -25.224 -67.793 1 134.95 ? NB HEM 1305 C 1 
HETATM 41 N NC HEM . . . J 10 35.776 -27.171 -69.415 1 134.93 ? NC HEM 1305 C 1 
HETATM 42 N ND HEM . . . J 10 33.885 -27.744 -67.224 1 134.95 ? ND HEM 1305 C 1 
HETATM 43 FE FE HEM . . . J 10 35.472 -26.434 -67.537 1 134.88 ? FE HEM 1305 C 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           43 
#