data_3AE7
#
_model_server_result.job_id            7VTKPhlpAfTa6Ck_1xvEbQ 
_model_server_result.datetime_utc      '2024-11-24 17:52:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ae7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":700}' 
#
_entry.id    3AE7 
#
_exptl.entry_id    3AE7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3AE7 
_cell.length_a            71.175 
_cell.length_b            83.988 
_cell.length_c            293.691 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3AE7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 57 A HIS 57 1_555 E C8M FAD . A FAD 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc1 B SG CYS 65 B CYS 65 1_555 F FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
metalc ? metalc2 B SG CYS 70 B CYS 70 1_555 F FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc3 B SG CYS 73 B CYS 73 1_555 F FE1 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? 
metalc ? metalc4 B SG CYS 158 B CYS 158 1_555 G FE4 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc5 B SG CYS 161 B CYS 161 1_555 G FE1 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc6 B SG CYS 164 B CYS 164 1_555 G FE2 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc7 B SG CYS 221 B CYS 221 1_555 H FE1 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? 
metalc ? metalc8 B SG CYS 225 B CYS 225 1_555 G FE3 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? 
metalc ? metalc9 C NE2 HIS 98 C HIS 101 1_555 J FE HEM . C HEM 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc10 J FE HEM . C HEM 1305 1_555 D NE2 HIS 46 D HIS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 129 n n 
PA O2A FAD sing 130 n n 
PA O5B FAD sing 131 n n 
PA O3P FAD sing 132 n n 
O2A HOA2 FAD sing 133 n n 
O5B C5B FAD sing 134 n n 
C5B C4B FAD sing 135 n n 
C5B H51A FAD sing 136 n n 
C5B H52A FAD sing 137 n n 
C4B O4B FAD sing 138 n n 
C4B C3B FAD sing 139 n n 
C4B H4B FAD sing 140 n n 
O4B C1B FAD sing 141 n n 
C3B O3B FAD sing 142 n n 
C3B C2B FAD sing 143 n n 
C3B H3B FAD sing 144 n n 
O3B HO3A FAD sing 145 n n 
C2B O2B FAD sing 146 n n 
C2B C1B FAD sing 147 n n 
C2B H2B FAD sing 148 n n 
O2B HO2A FAD sing 149 n n 
C1B N9A FAD sing 150 n n 
C1B H1B FAD sing 151 n n 
N9A C8A FAD sing 152 n y 
N9A C4A FAD sing 153 n y 
C8A N7A FAD doub 154 n y 
C8A H8A FAD sing 155 n n 
N7A C5A FAD sing 156 n y 
C5A C6A FAD sing 157 n y 
C5A C4A FAD doub 158 n y 
C6A N6A FAD sing 159 n n 
C6A N1A FAD doub 160 n y 
N6A H61A FAD sing 161 n n 
N6A H62A FAD sing 162 n n 
N1A C2A FAD sing 163 n y 
C2A N3A FAD doub 164 n y 
C2A H2A FAD sing 165 n n 
N3A C4A FAD sing 166 n y 
N1 C2 FAD sing 167 n n 
N1 C10 FAD doub 168 n n 
C2 O2 FAD doub 169 n n 
C2 N3 FAD sing 170 n n 
N3 C4 FAD sing 171 n n 
N3 HN3 FAD sing 172 n n 
C4 O4 FAD doub 173 n n 
C4 C4X FAD sing 174 n n 
C4X N5 FAD doub 175 n n 
C4X C10 FAD sing 176 n n 
N5 C5X FAD sing 177 n n 
C5X C6 FAD doub 178 n y 
C5X C9A FAD sing 179 n y 
C6 C7 FAD sing 180 n y 
C6 H6 FAD sing 181 n n 
C7 C7M FAD sing 182 n n 
C7 C8 FAD doub 183 n y 
C7M HM71 FAD sing 184 n n 
C7M HM72 FAD sing 185 n n 
C7M HM73 FAD sing 186 n n 
C8 C8M FAD sing 187 n n 
C8 C9 FAD sing 188 n y 
C8M HM81 FAD sing 189 n n 
C8M HM82 FAD sing 190 n n 
C8M HM83 FAD sing 191 n n 
C9 C9A FAD doub 192 n y 
C9 H9 FAD sing 193 n n 
C9A N10 FAD sing 194 n n 
N10 C10 FAD sing 195 n n 
N10 C1' FAD sing 196 n n 
C1' C2' FAD sing 197 n n 
C1' "H1'1" FAD sing 198 n n 
C1' "H1'2" FAD sing 199 n n 
C2' O2' FAD sing 200 n n 
C2' C3' FAD sing 201 n n 
C2' H2' FAD sing 202 n n 
O2' HO2' FAD sing 203 n n 
C3' O3' FAD sing 204 n n 
C3' C4' FAD sing 205 n n 
C3' H3' FAD sing 206 n n 
O3' HO3' FAD sing 207 n n 
C4' O4' FAD sing 208 n n 
C4' C5' FAD sing 209 n n 
C4' H4' FAD sing 210 n n 
O4' HO4' FAD sing 211 n n 
C5' O5' FAD sing 212 n n 
C5' "H5'1" FAD sing 213 n n 
C5' "H5'2" FAD sing 214 n n 
O5' P FAD sing 215 n n 
P O1P FAD doub 216 n n 
P O2P FAD sing 217 n n 
P O3P FAD sing 218 n n 
O2P HOP2 FAD sing 219 n n 
#
_atom_sites.entry_id                     3AE7 
_atom_sites.fract_transf_matrix[1][1]    0.01405 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011906 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003405 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 FAD A 1 700 700 FAD FAD . 
F 6 FES B 1 302 302 FES FES . 
G 7 SF4 B 1 303 303 SF4 SF4 . 
H 8 F3S B 1 304 304 F3S F3S . 
I 9 12J B 1 1201 1201 12J 12J . 
J 10 HEM C 1 1305 1305 HEM HEM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . E 5 11.12 -16.341 -22.863 1 127.82 ? PA FAD 700 A 1 
HETATM 2 O O1A FAD . . . E 5 12.447 -15.856 -23.39 1 127.76 ? O1A FAD 700 A 1 
HETATM 3 O O2A FAD . . . E 5 10.001 -15.418 -23.289 1 127.86 ? O2A FAD 700 A 1 
HETATM 4 O O5B FAD . . . E 5 10.85 -17.847 -23.359 1 127.77 ? O5B FAD 700 A 1 
HETATM 5 C C5B FAD . . . E 5 9.566 -18.408 -23.209 1 127.71 ? C5B FAD 700 A 1 
HETATM 6 C C4B FAD . . . E 5 9.59 -19.881 -23.592 1 127.61 ? C4B FAD 700 A 1 
HETATM 7 O O4B FAD . . . E 5 8.47 -20.536 -23.028 1 127.56 ? O4B FAD 700 A 1 
HETATM 8 C C3B FAD . . . E 5 9.523 -20.058 -25.1 1 127.58 ? C3B FAD 700 A 1 
HETATM 9 O O3B FAD . . . E 5 10.64 -20.807 -25.517 1 127.56 ? O3B FAD 700 A 1 
HETATM 10 C C2B FAD . . . E 5 8.238 -20.822 -25.362 1 127.54 ? C2B FAD 700 A 1 
HETATM 11 O O2B FAD . . . E 5 8.439 -21.909 -26.234 1 127.54 ? O2B FAD 700 A 1 
HETATM 12 C C1B FAD . . . E 5 7.79 -21.311 -23.995 1 127.52 ? C1B FAD 700 A 1 
HETATM 13 N N9A FAD . . . E 5 6.328 -21.172 -23.858 1 127.47 ? N9A FAD 700 A 1 
HETATM 14 C C8A FAD . . . E 5 5.619 -20.022 -23.624 1 127.44 ? C8A FAD 700 A 1 
HETATM 15 N N7A FAD . . . E 5 4.304 -20.333 -23.57 1 127.45 ? N7A FAD 700 A 1 
HETATM 16 C C5A FAD . . . E 5 4.164 -21.663 -23.767 1 127.5 ? C5A FAD 700 A 1 
HETATM 17 C C6A FAD . . . E 5 3.05 -22.498 -23.813 1 127.57 ? C6A FAD 700 A 1 
HETATM 18 N N6A FAD . . . E 5 1.854 -21.973 -24.062 1 127.68 ? N6A FAD 700 A 1 
HETATM 19 N N1A FAD . . . E 5 3.235 -23.848 -24.037 1 127.54 ? N1A FAD 700 A 1 
HETATM 20 C C2A FAD . . . E 5 4.501 -24.372 -24.215 1 127.47 ? C2A FAD 700 A 1 
HETATM 21 N N3A FAD . . . E 5 5.596 -23.534 -24.171 1 127.47 ? N3A FAD 700 A 1 
HETATM 22 C C4A FAD . . . E 5 5.431 -22.204 -23.95 1 127.47 ? C4A FAD 700 A 1 
HETATM 23 N N1 FAD . . . E 5 17.651 -9.292 -20 1 127.57 ? N1 FAD 700 A 1 
HETATM 24 C C2 FAD . . . E 5 19.008 -9.183 -19.765 1 127.55 ? C2 FAD 700 A 1 
HETATM 25 O O2 FAD . . . E 5 19.502 -9.699 -18.763 1 127.54 ? O2 FAD 700 A 1 
HETATM 26 N N3 FAD . . . E 5 19.809 -8.5 -20.66 1 127.5 ? N3 FAD 700 A 1 
HETATM 27 C C4 FAD . . . E 5 19.25 -7.924 -21.785 1 127.51 ? C4 FAD 700 A 1 
HETATM 28 O O4 FAD . . . E 5 19.97 -7.318 -22.574 1 127.55 ? O4 FAD 700 A 1 
HETATM 29 C C4X FAD . . . E 5 17.88 -8.028 -22.024 1 127.5 ? C4X FAD 700 A 1 
HETATM 30 N N5 FAD . . . E 5 17.317 -7.451 -23.149 1 127.51 ? N5 FAD 700 A 1 
HETATM 31 C C5X FAD . . . E 5 15.961 -7.558 -23.388 1 127.49 ? C5X FAD 700 A 1 
HETATM 32 C C6 FAD . . . E 5 15.405 -6.977 -24.525 1 127.57 ? C6 FAD 700 A 1 
HETATM 33 C C7 FAD . . . E 5 14.036 -7.075 -24.771 1 127.61 ? C7 FAD 700 A 1 
HETATM 34 C C7M FAD . . . E 5 13.467 -6.437 -26.005 1 127.58 ? C7M FAD 700 A 1 
HETATM 35 C C8 FAD . . . E 5 13.22 -7.767 -23.871 1 127.61 ? C8 FAD 700 A 1 
HETATM 36 C C8M FAD . . . E 5 11.741 -7.892 -24.088 1 127.57 ? C8M FAD 700 A 1 
HETATM 37 C C9 FAD . . . E 5 13.778 -8.349 -22.737 1 127.57 ? C9 FAD 700 A 1 
HETATM 38 C C9A FAD . . . E 5 15.148 -8.247 -22.488 1 127.46 ? C9A FAD 700 A 1 
HETATM 39 N N10 FAD . . . E 5 15.705 -8.822 -21.355 1 127.41 ? N10 FAD 700 A 1 
HETATM 40 C C10 FAD . . . E 5 17.073 -8.718 -21.122 1 127.47 ? C10 FAD 700 A 1 
HETATM 41 C C1' FAD . . . E 5 14.824 -9.582 -20.4 1 127.34 ? C1' FAD 700 A 1 
HETATM 42 C C2' FAD . . . E 5 15.029 -11.075 -20.693 1 127.27 ? C2' FAD 700 A 1 
HETATM 43 O O2' FAD . . . E 5 15.41 -11.253 -22.044 1 127.23 ? O2' FAD 700 A 1 
HETATM 44 C C3' FAD . . . E 5 13.817 -11.962 -20.413 1 127.25 ? C3' FAD 700 A 1 
HETATM 45 O O3' FAD . . . E 5 13.243 -11.625 -19.171 1 127.28 ? O3' FAD 700 A 1 
HETATM 46 C C4' FAD . . . E 5 14.24 -13.431 -20.391 1 127.21 ? C4' FAD 700 A 1 
HETATM 47 O O4' FAD . . . E 5 15.027 -13.733 -21.523 1 127.18 ? O4' FAD 700 A 1 
HETATM 48 C C5' FAD . . . E 5 13.045 -14.375 -20.359 1 127.24 ? C5' FAD 700 A 1 
HETATM 49 O O5' FAD . . . E 5 13.496 -15.693 -20.58 1 127.27 ? O5' FAD 700 A 1 
HETATM 50 P P FAD . . . E 5 12.491 -16.944 -20.475 1 127.37 ? P FAD 700 A 1 
HETATM 51 O O1P FAD . . . E 5 13.088 -18.133 -21.183 1 127.35 ? O1P FAD 700 A 1 
HETATM 52 O O2P FAD . . . E 5 12.183 -17.266 -19.032 1 127.36 ? O2P FAD 700 A 1 
HETATM 53 O O3P FAD . . . E 5 11.168 -16.466 -21.258 1 127.63 ? O3P FAD 700 A 1 
#
_model_server_stats.io_time_ms              83 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           53 
#