data_3AEA # _model_server_result.job_id 3wWjmKxqCzQoxu_7LRsFVA _model_server_result.datetime_utc '2024-11-22 13:56:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3aea # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1201}' # _entry.id 3AEA # _exptl.entry_id 3AEA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 322.325 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{3-[(dimethylamino)methyl]phenyl}-2-(trifluoromethyl)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AEA _cell.length_a 71.505 _cell.length_b 83.751 _cell.length_c 294.959 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AEA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 11 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NE2 HIS 57 A HIS 57 1_555 E C8M FAD . A FAD 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc1 B SG CYS 65 B CYS 65 1_555 G FE1 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc2 B SG CYS 70 B CYS 70 1_555 G FE1 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc3 B SG CYS 73 B CYS 73 1_555 G FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc4 B SG CYS 158 B CYS 158 1_555 H FE3 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc5 B SG CYS 161 B CYS 161 1_555 H FE2 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc6 B SG CYS 164 B CYS 164 1_555 H FE1 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc7 B SG CYS 168 B CYS 168 1_555 I FE4 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc8 B SG CYS 215 B CYS 215 1_555 I FE1 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc9 B SG CYS 225 B CYS 225 1_555 H FE4 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc10 C NE2 HIS 98 C HIS 101 1_555 J FE HEM . C HEM 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc11 J FE HEM . C HEM 1305 1_555 D NE2 HIS 46 D HIS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? # _chem_comp.formula 'C17 H17 F3 N2 O' _chem_comp.formula_weight 322.325 _chem_comp.id F9A _chem_comp.mon_nstd_flag . _chem_comp.name N-{3-[(dimethylamino)methyl]phenyl}-2-(trifluoromethyl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C8 F9A doub 208 n n C1 F1 F9A sing 209 n n C1 C2 F9A sing 210 n n C1 F2 F9A sing 211 n n C1 F3 F9A sing 212 n n N1 C8 F9A sing 213 n n N1 C9 F9A sing 214 n n C2 C3 F9A doub 215 n y C2 C7 F9A sing 216 n y N2 C15 F9A sing 217 n n N2 C16 F9A sing 218 n n N2 C17 F9A sing 219 n n C3 C4 F9A sing 220 n y C3 C8 F9A sing 221 n n C4 C5 F9A doub 222 n y C5 C6 F9A sing 223 n y C6 C7 F9A doub 224 n y C9 C10 F9A doub 225 n y C9 C14 F9A sing 226 n y C10 C11 F9A sing 227 n y C11 C12 F9A doub 228 n y C11 C15 F9A sing 229 n n C12 C13 F9A sing 230 n y C13 C14 F9A doub 231 n y N1 HN1 F9A sing 232 n n C4 H4 F9A sing 233 n n C5 H5 F9A sing 234 n n C6 H6 F9A sing 235 n n C7 H7 F9A sing 236 n n C10 H10 F9A sing 237 n n C12 H12 F9A sing 238 n n C13 H13 F9A sing 239 n n C14 H14 F9A sing 240 n n C15 H15 F9A sing 241 n n C15 H15A F9A sing 242 n n C16 H16 F9A sing 243 n n C16 H16A F9A sing 244 n n C16 H16B F9A sing 245 n n C17 H17 F9A sing 246 n n C17 H17A F9A sing 247 n n C17 H17B F9A sing 248 n n # _atom_sites.entry_id 3AEA _atom_sites.fract_transf_matrix[1][1] 0.013985 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01194 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00339 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 FAD A 1 700 700 FAD FAD . F 6 MLI A 1 701 701 MLI MLI . G 7 FES B 1 302 302 FES FES . H 8 SF4 B 1 303 303 SF4 SF4 . I 9 F3S B 1 304 304 F3S F3S . J 10 HEM C 1 1305 1305 HEM HEM . K 11 F9A D 1 1201 1201 F9A F9A . L 12 EPH D 1 1306 1306 EPH EPH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O F9A . . . K 11 14.735 26.406 -61.233 1 103.69 ? O F9A 1201 D 1 HETATM 2 C C1 F9A . . . K 11 12.546 27.116 -59.083 1 103.57 ? C1 F9A 1201 D 1 HETATM 3 F F1 F9A . . . K 11 13.707 26.622 -58.697 1 103.62 ? F1 F9A 1201 D 1 HETATM 4 N N1 F9A . . . K 11 14.689 24.149 -61.286 1 103.9 ? N1 F9A 1201 D 1 HETATM 5 C C2 F9A . . . K 11 11.868 26.186 -60.054 1 103.55 ? C2 F9A 1201 D 1 HETATM 6 F F2 F9A . . . K 11 12.737 28.28 -59.675 1 103.63 ? F2 F9A 1201 D 1 HETATM 7 N N2 F9A . . . K 11 18.463 20.112 -60.427 1 105.38 ? N2 F9A 1201 D 1 HETATM 8 C C3 F9A . . . K 11 12.616 25.358 -61.055 1 103.63 ? C3 F9A 1201 D 1 HETATM 9 F F3 F9A . . . K 11 11.783 27.286 -58.017 1 103.45 ? F3 F9A 1201 D 1 HETATM 10 C C4 F9A . . . K 11 11.885 24.53 -61.909 1 103.51 ? C4 F9A 1201 D 1 HETATM 11 C C5 F9A . . . K 11 10.495 24.477 -61.837 1 103.53 ? C5 F9A 1201 D 1 HETATM 12 C C6 F9A . . . K 11 9.799 25.251 -60.91 1 103.59 ? C6 F9A 1201 D 1 HETATM 13 C C7 F9A . . . K 11 10.476 26.094 -60.03 1 103.58 ? C7 F9A 1201 D 1 HETATM 14 C C8 F9A . . . K 11 14.116 25.352 -61.196 1 103.72 ? C8 F9A 1201 D 1 HETATM 15 C C9 F9A . . . K 11 16.005 23.855 -61.425 1 104.21 ? C9 F9A 1201 D 1 HETATM 16 C C10 F9A . . . K 11 16.344 22.505 -61.493 1 104.57 ? C10 F9A 1201 D 1 HETATM 17 C C11 F9A . . . K 11 17.672 22.109 -61.632 1 104.83 ? C11 F9A 1201 D 1 HETATM 18 C C12 F9A . . . K 11 18.675 23.075 -61.71 1 104.58 ? C12 F9A 1201 D 1 HETATM 19 C C13 F9A . . . K 11 18.344 24.429 -61.643 1 104.32 ? C13 F9A 1201 D 1 HETATM 20 C C14 F9A . . . K 11 17.012 24.82 -61.5 1 104.18 ? C14 F9A 1201 D 1 HETATM 21 C C15 F9A . . . K 11 18.006 20.633 -61.709 1 105.21 ? C15 F9A 1201 D 1 HETATM 22 C C16 F9A . . . K 11 17.505 19.815 -59.371 1 105.3 ? C16 F9A 1201 D 1 HETATM 23 C C17 F9A . . . K 11 19.884 19.88 -60.21 1 105.4 ? C17 F9A 1201 D 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #