data_3AEG
#
_model_server_result.job_id            4nn7TxqVjQQbC7kVjWbzXQ 
_model_server_result.datetime_utc      '2025-03-01 01:08:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3aeg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1305}' 
#
_entry.id    3AEG 
#
_exptl.entry_id    3AEG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          9 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3AEG 
_cell.length_a            71.862 
_cell.length_b            83.874 
_cell.length_c            294.862 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3AEG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      9 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 57 A HIS 57 1_555 E C8M FAD . A FAD 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
metalc ? metalc1 B SG CYS 65 B CYS 65 1_555 F FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
metalc ? metalc2 B SG CYS 70 B CYS 70 1_555 F FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc3 B SG CYS 85 B CYS 85 1_555 F FE1 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? 
metalc ? metalc4 B SG CYS 158 B CYS 158 1_555 G FE1 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc5 B SG CYS 161 B CYS 161 1_555 G FE2 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc6 B SG CYS 164 B CYS 164 1_555 G FE4 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc7 B SG CYS 168 B CYS 168 1_555 H FE1 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? 
metalc ? metalc8 B SG CYS 215 B CYS 215 1_555 H FE4 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? 
metalc ? metalc9 B SG CYS 225 B CYS 225 1_555 G FE3 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? 
metalc ? metalc10 C NE2 HIS 98 C HIS 101 1_555 I FE HEM . C HEM 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc11 I FE HEM . C HEM 1305 1_555 D NE2 HIS 46 D HIS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 271 n n 
CHA C4D HEM doub 272 n n 
CHA HHA HEM sing 273 n n 
CHB C4A HEM sing 274 n n 
CHB C1B HEM doub 275 n n 
CHB HHB HEM sing 276 n n 
CHC C4B HEM sing 277 n n 
CHC C1C HEM doub 278 n n 
CHC HHC HEM sing 279 n n 
CHD C4C HEM doub 280 n n 
CHD C1D HEM sing 281 n n 
CHD HHD HEM sing 282 n n 
C1A C2A HEM doub 283 n y 
C1A NA HEM sing 284 n y 
C2A C3A HEM sing 285 n y 
C2A CAA HEM sing 286 n n 
C3A C4A HEM doub 287 n y 
C3A CMA HEM sing 288 n n 
C4A NA HEM sing 289 n y 
CMA HMA HEM sing 290 n n 
CMA HMAA HEM sing 291 n n 
CMA HMAB HEM sing 292 n n 
CAA CBA HEM sing 293 n n 
CAA HAA HEM sing 294 n n 
CAA HAAA HEM sing 295 n n 
CBA CGA HEM sing 296 n n 
CBA HBA HEM sing 297 n n 
CBA HBAA HEM sing 298 n n 
CGA O1A HEM doub 299 n n 
CGA O2A HEM sing 300 n n 
C1B C2B HEM sing 301 n n 
C1B NB HEM sing 302 n n 
C2B C3B HEM doub 303 n n 
C2B CMB HEM sing 304 n n 
C3B C4B HEM sing 305 n n 
C3B CAB HEM sing 306 n n 
C4B NB HEM doub 307 n n 
CMB HMB HEM sing 308 n n 
CMB HMBA HEM sing 309 n n 
CMB HMBB HEM sing 310 n n 
CAB CBB HEM doub 311 n n 
CAB HAB HEM sing 312 n n 
CBB HBB HEM sing 313 n n 
CBB HBBA HEM sing 314 n n 
C1C C2C HEM sing 315 n y 
C1C NC HEM sing 316 n y 
C2C C3C HEM doub 317 n y 
C2C CMC HEM sing 318 n n 
C3C C4C HEM sing 319 n y 
C3C CAC HEM sing 320 n n 
C4C NC HEM sing 321 n y 
CMC HMC HEM sing 322 n n 
CMC HMCA HEM sing 323 n n 
CMC HMCB HEM sing 324 n n 
CAC CBC HEM doub 325 n n 
CAC HAC HEM sing 326 n n 
CBC HBC HEM sing 327 n n 
CBC HBCA HEM sing 328 n n 
C1D C2D HEM sing 329 n n 
C1D ND HEM doub 330 n n 
C2D C3D HEM doub 331 n n 
C2D CMD HEM sing 332 n n 
C3D C4D HEM sing 333 n n 
C3D CAD HEM sing 334 n n 
C4D ND HEM sing 335 n n 
CMD HMD HEM sing 336 n n 
CMD HMDA HEM sing 337 n n 
CMD HMDB HEM sing 338 n n 
CAD CBD HEM sing 339 n n 
CAD HAD HEM sing 340 n n 
CAD HADA HEM sing 341 n n 
CBD CGD HEM sing 342 n n 
CBD HBD HEM sing 343 n n 
CBD HBDA HEM sing 344 n n 
CGD O1D HEM doub 345 n n 
CGD O2D HEM sing 346 n n 
O2A H2A HEM sing 347 n n 
O2D H2D HEM sing 348 n n 
FE NA HEM sing 349 n n 
FE NB HEM sing 350 n n 
FE NC HEM sing 351 n n 
FE ND HEM sing 352 n n 
#
_atom_sites.entry_id                     3AEG 
_atom_sites.fract_transf_matrix[1][1]    0.013916 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011923 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003391 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 FAD A 1 700 700 FAD FAD . 
F 6 FES B 1 302 302 FES FES . 
G 7 SF4 B 1 303 303 SF4 SF4 . 
H 8 F3S B 1 304 304 F3S F3S . 
I 9 HEM C 1 1305 1305 HEM HEM . 
J 10 11J C 1 1201 1201 11J 11J . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . I 9 -33.744 -27.304 65.098 1 87.93 ? CHA HEM 1305 C 1 
HETATM 2 C CHB HEM . . . I 9 -37.609 -24.503 65.865 1 87.91 ? CHB HEM 1305 C 1 
HETATM 3 C CHC HEM . . . I 9 -37.862 -26.107 70.446 1 87.81 ? CHC HEM 1305 C 1 
HETATM 4 C CHD HEM . . . I 9 -34.31 -29.294 69.539 1 87.73 ? CHD HEM 1305 C 1 
HETATM 5 C C1A HEM . . . I 9 -34.842 -26.511 64.855 1 87.93 ? C1A HEM 1305 C 1 
HETATM 6 C C2A HEM . . . I 9 -35.379 -26.12 63.557 1 88.3 ? C2A HEM 1305 C 1 
HETATM 7 C C3A HEM . . . I 9 -36.45 -25.346 63.781 1 87.98 ? C3A HEM 1305 C 1 
HETATM 8 C C4A HEM . . . I 9 -36.622 -25.216 65.217 1 87.83 ? C4A HEM 1305 C 1 
HETATM 9 C CMA HEM . . . I 9 -37.353 -24.696 62.704 1 87.76 ? CMA HEM 1305 C 1 
HETATM 10 C CAA HEM . . . I 9 -34.847 -26.52 62.15 1 89.03 ? CAA HEM 1305 C 1 
HETATM 11 C CBA HEM . . . I 9 -33.321 -26.518 62.056 1 89.71 ? CBA HEM 1305 C 1 
HETATM 12 C CGA HEM . . . I 9 -32.846 -25.725 60.864 1 90.2 ? CGA HEM 1305 C 1 
HETATM 13 O O1A HEM . . . I 9 -33.117 -26.141 59.705 1 90.27 ? O1A HEM 1305 C 1 
HETATM 14 O O2A HEM . . . I 9 -32.183 -24.677 61.082 1 90.44 ? O2A HEM 1305 C 1 
HETATM 15 C C1B HEM . . . I 9 -37.997 -24.651 67.182 1 87.88 ? C1B HEM 1305 C 1 
HETATM 16 C C2B HEM . . . I 9 -39.028 -23.893 67.869 1 87.94 ? C2B HEM 1305 C 1 
HETATM 17 C C3B HEM . . . I 9 -39.092 -24.338 69.129 1 87.95 ? C3B HEM 1305 C 1 
HETATM 18 C C4B HEM . . . I 9 -38.109 -25.392 69.292 1 87.82 ? C4B HEM 1305 C 1 
HETATM 19 C CMB HEM . . . I 9 -39.896 -22.77 67.248 1 87.98 ? CMB HEM 1305 C 1 
HETATM 20 C CAB HEM . . . I 9 -40.047 -23.824 70.232 1 88.18 ? CAB HEM 1305 C 1 
HETATM 21 C CBB HEM . . . I 9 -41.232 -24.411 70.416 1 88.28 ? CBB HEM 1305 C 1 
HETATM 22 C C1C HEM . . . I 9 -36.94 -27.122 70.61 1 87.76 ? C1C HEM 1305 C 1 
HETATM 23 C C2C HEM . . . I 9 -36.717 -27.904 71.814 1 87.71 ? C2C HEM 1305 C 1 
HETATM 24 C C3C HEM . . . I 9 -35.737 -28.781 71.561 1 87.65 ? C3C HEM 1305 C 1 
HETATM 25 C C4C HEM . . . I 9 -35.301 -28.589 70.19 1 87.66 ? C4C HEM 1305 C 1 
HETATM 26 C CMC HEM . . . I 9 -37.483 -27.743 73.15 1 87.58 ? CMC HEM 1305 C 1 
HETATM 27 C CAC HEM . . . I 9 -35.159 -29.821 72.549 1 87.76 ? CAC HEM 1305 C 1 
HETATM 28 C CBC HEM . . . I 9 -35.755 -31.008 72.693 1 88.16 ? CBC HEM 1305 C 1 
HETATM 29 C C1D HEM . . . I 9 -33.78 -29.037 68.288 1 87.8 ? C1D HEM 1305 C 1 
HETATM 30 C C2D HEM . . . I 9 -32.616 -29.682 67.718 1 87.94 ? C2D HEM 1305 C 1 
HETATM 31 C C3D HEM . . . I 9 -32.429 -29.061 66.327 1 87.92 ? C3D HEM 1305 C 1 
HETATM 32 C C4D HEM . . . I 9 -33.51 -28.105 66.197 1 87.88 ? C4D HEM 1305 C 1 
HETATM 33 C CMD HEM . . . I 9 -31.736 -30.773 68.368 1 88.2 ? CMD HEM 1305 C 1 
HETATM 34 C CAD HEM . . . I 9 -31.322 -29.414 65.301 1 87.92 ? CAD HEM 1305 C 1 
HETATM 35 C CBD HEM . . . I 9 -30.505 -28.195 64.879 1 88.27 ? CBD HEM 1305 C 1 
HETATM 36 C CGD HEM . . . I 9 -30.385 -28.125 63.373 1 88.71 ? CGD HEM 1305 C 1 
HETATM 37 O O1D HEM . . . I 9 -31.022 -28.939 62.649 1 88.75 ? O1D HEM 1305 C 1 
HETATM 38 O O2D HEM . . . I 9 -29.637 -27.24 62.883 1 88.93 ? O2D HEM 1305 C 1 
HETATM 39 N NA HEM . . . I 9 -35.623 -25.94 65.84 1 87.74 ? NA HEM 1305 C 1 
HETATM 40 N NB HEM . . . I 9 -37.46 -25.552 68.083 1 87.78 ? NB HEM 1305 C 1 
HETATM 41 N NC HEM . . . I 9 -36.057 -27.571 69.645 1 87.73 ? NC HEM 1305 C 1 
HETATM 42 N ND HEM . . . I 9 -34.269 -28.121 67.364 1 87.79 ? ND HEM 1305 C 1 
HETATM 43 FE FE HEM . . . I 9 -35.88 -26.831 67.719 1 87.8 ? FE HEM 1305 C 1 
#
_model_server_stats.io_time_ms              36 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#