data_3AF0
#
_model_server_result.job_id            Qk_6A0fA_cGJro3IG5F4FQ 
_model_server_result.datetime_utc      '2024-10-11 15:26:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3af0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":319}' 
#
_entry.id    3AF0 
#
_exptl.entry_id    3AF0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3AF0 
_cell.length_a            104.73 
_cell.length_b            104.73 
_cell.length_c            90.4 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3AF0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 M N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 174 n n 
C1 C2 GOL sing 175 n n 
C1 H11 GOL sing 176 n n 
C1 H12 GOL sing 177 n n 
O1 HO1 GOL sing 178 n n 
C2 O2 GOL sing 179 n n 
C2 C3 GOL sing 180 n n 
C2 H2 GOL sing 181 n n 
O2 HO2 GOL sing 182 n n 
C3 O3 GOL sing 183 n n 
C3 H31 GOL sing 184 n n 
C3 H32 GOL sing 185 n n 
O3 HO3 GOL sing 186 n n 
#
_atom_sites.entry_id                     3AF0 
_atom_sites.fract_transf_matrix[1][1]    0.009548 
_atom_sites.fract_transf_matrix[1][2]    0.005513 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011025 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011062 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GDP A 1 313 1 GDP GDP . 
C 3 PAU A 1 314 2 PAU PAU . 
D 4 CL A 1 315 1 CL CL . 
E 5 GOL A 1 316 1 GOL GOL . 
F 5 GOL A 1 317 2 GOL GOL . 
G 5 GOL A 1 318 3 GOL GOL . 
H 5 GOL A 1 319 4 GOL GOL . 
I 5 GOL A 1 320 5 GOL GOL . 
J 5 GOL A 1 321 6 GOL GOL . 
K 5 GOL A 1 322 7 GOL GOL . 
L 5 GOL A 1 323 8 GOL GOL . 
M 5 GOL A 1 324 9 GOL GOL . 
N 6 HOH A 1 325 1 HOH HOH . 
N 6 HOH A 2 326 2 HOH HOH . 
N 6 HOH A 3 327 3 HOH HOH . 
N 6 HOH A 4 328 4 HOH HOH . 
N 6 HOH A 5 329 5 HOH HOH . 
N 6 HOH A 6 330 6 HOH HOH . 
N 6 HOH A 7 331 7 HOH HOH . 
N 6 HOH A 8 332 8 HOH HOH . 
N 6 HOH A 9 333 9 HOH HOH . 
N 6 HOH A 10 334 10 HOH HOH . 
N 6 HOH A 11 335 11 HOH HOH . 
N 6 HOH A 12 336 12 HOH HOH . 
N 6 HOH A 13 337 13 HOH HOH . 
N 6 HOH A 14 338 14 HOH HOH . 
N 6 HOH A 15 339 15 HOH HOH . 
N 6 HOH A 16 340 16 HOH HOH . 
N 6 HOH A 17 341 17 HOH HOH . 
N 6 HOH A 18 342 18 HOH HOH . 
N 6 HOH A 19 343 19 HOH HOH . 
N 6 HOH A 20 344 20 HOH HOH . 
N 6 HOH A 21 345 21 HOH HOH . 
N 6 HOH A 22 346 22 HOH HOH . 
N 6 HOH A 23 347 23 HOH HOH . 
N 6 HOH A 24 348 24 HOH HOH . 
N 6 HOH A 25 349 25 HOH HOH . 
N 6 HOH A 26 350 26 HOH HOH . 
N 6 HOH A 27 351 27 HOH HOH . 
N 6 HOH A 28 352 28 HOH HOH . 
N 6 HOH A 29 353 29 HOH HOH . 
N 6 HOH A 30 354 30 HOH HOH . 
N 6 HOH A 31 355 31 HOH HOH . 
N 6 HOH A 32 356 32 HOH HOH . 
N 6 HOH A 33 357 33 HOH HOH . 
N 6 HOH A 34 358 34 HOH HOH . 
N 6 HOH A 35 359 35 HOH HOH . 
N 6 HOH A 36 360 36 HOH HOH . 
N 6 HOH A 37 361 37 HOH HOH . 
N 6 HOH A 38 362 38 HOH HOH . 
N 6 HOH A 39 363 39 HOH HOH . 
N 6 HOH A 40 364 40 HOH HOH . 
N 6 HOH A 41 365 41 HOH HOH . 
N 6 HOH A 42 366 42 HOH HOH . 
N 6 HOH A 43 367 43 HOH HOH . 
N 6 HOH A 44 368 44 HOH HOH . 
N 6 HOH A 45 369 45 HOH HOH . 
N 6 HOH A 46 370 46 HOH HOH . 
N 6 HOH A 47 371 47 HOH HOH . 
N 6 HOH A 48 372 48 HOH HOH . 
N 6 HOH A 49 373 49 HOH HOH . 
N 6 HOH A 50 374 50 HOH HOH . 
N 6 HOH A 51 375 51 HOH HOH . 
N 6 HOH A 52 376 52 HOH HOH . 
N 6 HOH A 53 377 53 HOH HOH . 
N 6 HOH A 54 378 54 HOH HOH . 
N 6 HOH A 55 379 55 HOH HOH . 
N 6 HOH A 56 380 56 HOH HOH . 
N 6 HOH A 57 381 57 HOH HOH . 
N 6 HOH A 58 382 58 HOH HOH . 
N 6 HOH A 59 383 59 HOH HOH . 
N 6 HOH A 60 384 60 HOH HOH . 
N 6 HOH A 61 385 61 HOH HOH . 
N 6 HOH A 62 386 62 HOH HOH . 
N 6 HOH A 63 387 63 HOH HOH . 
N 6 HOH A 64 388 64 HOH HOH . 
N 6 HOH A 65 389 65 HOH HOH . 
N 6 HOH A 66 390 66 HOH HOH . 
N 6 HOH A 67 391 67 HOH HOH . 
N 6 HOH A 68 392 68 HOH HOH . 
N 6 HOH A 69 393 69 HOH HOH . 
N 6 HOH A 70 394 70 HOH HOH . 
N 6 HOH A 71 395 71 HOH HOH . 
N 6 HOH A 72 396 72 HOH HOH . 
N 6 HOH A 73 397 73 HOH HOH . 
N 6 HOH A 74 398 74 HOH HOH . 
N 6 HOH A 75 399 75 HOH HOH . 
N 6 HOH A 76 400 76 HOH HOH . 
N 6 HOH A 77 401 77 HOH HOH . 
N 6 HOH A 78 402 78 HOH HOH . 
N 6 HOH A 79 403 79 HOH HOH . 
N 6 HOH A 80 404 80 HOH HOH . 
N 6 HOH A 81 405 81 HOH HOH . 
N 6 HOH A 82 406 82 HOH HOH . 
N 6 HOH A 83 407 83 HOH HOH . 
N 6 HOH A 84 408 84 HOH HOH . 
N 6 HOH A 85 409 85 HOH HOH . 
N 6 HOH A 86 410 86 HOH HOH . 
N 6 HOH A 87 411 87 HOH HOH . 
N 6 HOH A 88 412 88 HOH HOH . 
N 6 HOH A 89 413 89 HOH HOH . 
N 6 HOH A 90 414 90 HOH HOH . 
N 6 HOH A 91 415 91 HOH HOH . 
N 6 HOH A 92 416 92 HOH HOH . 
N 6 HOH A 93 417 93 HOH HOH . 
N 6 HOH A 94 418 94 HOH HOH . 
N 6 HOH A 95 419 95 HOH HOH . 
N 6 HOH A 96 420 96 HOH HOH . 
N 6 HOH A 97 421 97 HOH HOH . 
N 6 HOH A 98 422 98 HOH HOH . 
N 6 HOH A 99 423 99 HOH HOH . 
N 6 HOH A 100 424 100 HOH HOH . 
N 6 HOH A 101 425 101 HOH HOH . 
N 6 HOH A 102 426 102 HOH HOH . 
N 6 HOH A 103 427 103 HOH HOH . 
N 6 HOH A 104 428 104 HOH HOH . 
N 6 HOH A 105 429 105 HOH HOH . 
N 6 HOH A 106 430 106 HOH HOH . 
N 6 HOH A 107 431 107 HOH HOH . 
N 6 HOH A 108 432 108 HOH HOH . 
N 6 HOH A 109 433 109 HOH HOH . 
N 6 HOH A 110 434 110 HOH HOH . 
N 6 HOH A 111 435 111 HOH HOH . 
N 6 HOH A 112 436 112 HOH HOH . 
N 6 HOH A 113 437 113 HOH HOH . 
N 6 HOH A 114 438 114 HOH HOH . 
N 6 HOH A 115 439 115 HOH HOH . 
N 6 HOH A 116 440 116 HOH HOH . 
N 6 HOH A 117 441 117 HOH HOH . 
N 6 HOH A 118 442 118 HOH HOH . 
N 6 HOH A 119 443 119 HOH HOH . 
N 6 HOH A 120 444 120 HOH HOH . 
N 6 HOH A 121 445 121 HOH HOH . 
N 6 HOH A 122 446 122 HOH HOH . 
N 6 HOH A 123 447 123 HOH HOH . 
N 6 HOH A 124 448 124 HOH HOH . 
N 6 HOH A 125 449 125 HOH HOH . 
N 6 HOH A 126 450 126 HOH HOH . 
N 6 HOH A 127 451 127 HOH HOH . 
N 6 HOH A 128 452 128 HOH HOH . 
N 6 HOH A 129 453 129 HOH HOH . 
N 6 HOH A 130 454 130 HOH HOH . 
N 6 HOH A 131 455 131 HOH HOH . 
N 6 HOH A 132 456 132 HOH HOH . 
N 6 HOH A 133 457 133 HOH HOH . 
N 6 HOH A 134 458 134 HOH HOH . 
N 6 HOH A 135 459 135 HOH HOH . 
N 6 HOH A 136 460 136 HOH HOH . 
N 6 HOH A 137 461 137 HOH HOH . 
N 6 HOH A 138 462 138 HOH HOH . 
N 6 HOH A 139 463 139 HOH HOH . 
N 6 HOH A 140 464 140 HOH HOH . 
N 6 HOH A 141 465 141 HOH HOH . 
N 6 HOH A 142 466 142 HOH HOH . 
N 6 HOH A 143 467 143 HOH HOH . 
N 6 HOH A 144 468 144 HOH HOH . 
N 6 HOH A 145 469 145 HOH HOH . 
N 6 HOH A 146 470 146 HOH HOH . 
N 6 HOH A 147 471 147 HOH HOH . 
N 6 HOH A 148 472 148 HOH HOH . 
N 6 HOH A 149 473 149 HOH HOH . 
N 6 HOH A 150 474 150 HOH HOH . 
N 6 HOH A 151 475 151 HOH HOH . 
N 6 HOH A 152 476 152 HOH HOH . 
N 6 HOH A 153 477 153 HOH HOH . 
N 6 HOH A 154 478 154 HOH HOH . 
N 6 HOH A 155 479 155 HOH HOH . 
N 6 HOH A 156 480 156 HOH HOH . 
N 6 HOH A 157 481 157 HOH HOH . 
N 6 HOH A 158 482 158 HOH HOH . 
N 6 HOH A 159 483 159 HOH HOH . 
N 6 HOH A 160 484 160 HOH HOH . 
N 6 HOH A 161 485 161 HOH HOH . 
N 6 HOH A 162 486 162 HOH HOH . 
N 6 HOH A 163 487 163 HOH HOH . 
N 6 HOH A 164 488 164 HOH HOH . 
N 6 HOH A 165 489 165 HOH HOH . 
N 6 HOH A 166 490 166 HOH HOH . 
N 6 HOH A 167 491 167 HOH HOH . 
N 6 HOH A 168 492 168 HOH HOH . 
N 6 HOH A 169 493 169 HOH HOH . 
N 6 HOH A 170 494 170 HOH HOH . 
N 6 HOH A 171 495 171 HOH HOH . 
N 6 HOH A 172 496 172 HOH HOH . 
N 6 HOH A 173 497 173 HOH HOH . 
N 6 HOH A 174 498 174 HOH HOH . 
N 6 HOH A 175 499 175 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 5 25.311 44.131 -3.317 1 86.53 ? C1 GOL 319 A 1 
HETATM 2 O O1 GOL . . . H 5 26.138 44.661 -4.331 1 85.86 ? O1 GOL 319 A 1 
HETATM 3 C C2 GOL . . . H 5 23.946 43.718 -3.867 1 85.77 ? C2 GOL 319 A 1 
HETATM 4 O O2 GOL . . . H 5 24.031 42.946 -5.046 1 80.67 ? O2 GOL 319 A 1 
HETATM 5 C C3 GOL . . . H 5 23.079 44.946 -4.11 1 84.69 ? C3 GOL 319 A 1 
HETATM 6 O O3 GOL . . . H 5 22.017 44.893 -3.188 1 82.98 ? O3 GOL 319 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#