data_3AGP # _model_server_result.job_id d6rRdq7z32iSvhytvtLn7g _model_server_result.datetime_utc '2024-11-24 21:36:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3agp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2001}' # _entry.id 3AGP # _exptl.entry_id 3AGP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AGP _cell.length_a 139.498 _cell.length_b 256.428 _cell.length_c 100.961 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AGP _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 50.4805 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 968 A ASP 968 1_555 B CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.013 ? metalc ? metalc2 A OE2 GLU 1089 A GLU 1089 1_555 B CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? metalc ? metalc3 B CA CA . A CA 2001 1_555 C O HOH . A HOH 2024 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3AGP _atom_sites.fract_transf_matrix[1][1] 0.007169 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0039 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 2001 2001 CA CA . C 3 HOH A 1 2002 2002 HOH HOH . C 3 HOH A 2 2003 2003 HOH HOH . C 3 HOH A 3 2004 2004 HOH HOH . C 3 HOH A 4 2005 2005 HOH HOH . C 3 HOH A 5 2006 2006 HOH HOH . C 3 HOH A 6 2007 2007 HOH HOH . C 3 HOH A 7 2008 2008 HOH HOH . C 3 HOH A 8 2009 2009 HOH HOH . C 3 HOH A 9 2010 2010 HOH HOH . C 3 HOH A 10 2011 2011 HOH HOH . C 3 HOH A 11 2012 2012 HOH HOH . C 3 HOH A 12 2013 2013 HOH HOH . C 3 HOH A 13 2014 2014 HOH HOH . C 3 HOH A 14 2015 2015 HOH HOH . C 3 HOH A 15 2016 2016 HOH HOH . C 3 HOH A 16 2017 2017 HOH HOH . C 3 HOH A 17 2018 2018 HOH HOH . C 3 HOH A 18 2019 2019 HOH HOH . C 3 HOH A 19 2020 2020 HOH HOH . C 3 HOH A 20 2021 2021 HOH HOH . C 3 HOH A 21 2022 2022 HOH HOH . C 3 HOH A 22 2023 2023 HOH HOH . C 3 HOH A 23 2024 2024 HOH HOH . C 3 HOH A 24 2025 2025 HOH HOH . C 3 HOH A 25 2026 2026 HOH HOH . C 3 HOH A 26 2027 2027 HOH HOH . C 3 HOH A 27 2028 2028 HOH HOH . C 3 HOH A 28 2029 2029 HOH HOH . C 3 HOH A 29 2030 2030 HOH HOH . C 3 HOH A 30 2031 2031 HOH HOH . C 3 HOH A 31 2032 2032 HOH HOH . C 3 HOH A 32 2033 2033 HOH HOH . C 3 HOH A 33 2034 2034 HOH HOH . C 3 HOH A 34 2035 2035 HOH HOH . C 3 HOH A 35 2036 2036 HOH HOH . C 3 HOH A 36 2037 2037 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 20.468 _atom_site.Cartn_y 66.348 _atom_site.Cartn_z 42.723 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 82.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 2001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #