data_3AHQ # _model_server_result.job_id d0l9ZQU8IbGC7Ziq8bthfA _model_server_result.datetime_utc '2024-11-04 20:34:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ahq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3AHQ # _exptl.entry_id 3AHQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AHQ _cell.length_a 54.962 _cell.length_b 140.73 _cell.length_c 144.855 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AHQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 32 A CYS 35 1_555 A SG CYS 45 A CYS 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 34 A CYS 37 1_555 A SG CYS 43 A CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf3 A SG CYS 82 A CYS 85 1_555 A SG CYS 388 A CYS 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf4 A SG CYS 205 A CYS 208 1_555 A SG CYS 238 A CYS 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf5 A SG CYS 391 A CYS 394 1_555 A SG CYS 394 A CYS 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 3AHQ _atom_sites.fract_transf_matrix[1][1] 0.018194 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007106 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006903 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 1 1 FAD FAD . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 469 1 HOH HOH . C 3 HOH A 4 470 4 HOH HOH . C 3 HOH A 5 471 5 HOH HOH . C 3 HOH A 6 472 6 HOH HOH . C 3 HOH A 7 473 8 HOH HOH . C 3 HOH A 8 474 10 HOH HOH . C 3 HOH A 9 475 11 HOH HOH . C 3 HOH A 10 476 12 HOH HOH . C 3 HOH A 11 477 13 HOH HOH . C 3 HOH A 12 478 14 HOH HOH . C 3 HOH A 13 479 15 HOH HOH . C 3 HOH A 14 480 16 HOH HOH . C 3 HOH A 15 481 17 HOH HOH . C 3 HOH A 16 482 19 HOH HOH . C 3 HOH A 17 483 21 HOH HOH . C 3 HOH A 18 484 24 HOH HOH . C 3 HOH A 19 485 26 HOH HOH . C 3 HOH A 20 486 27 HOH HOH . C 3 HOH A 21 487 28 HOH HOH . C 3 HOH A 22 488 29 HOH HOH . C 3 HOH A 23 489 30 HOH HOH . C 3 HOH A 24 490 31 HOH HOH . C 3 HOH A 25 491 32 HOH HOH . C 3 HOH A 26 492 33 HOH HOH . C 3 HOH A 27 493 36 HOH HOH . C 3 HOH A 28 494 37 HOH HOH . C 3 HOH A 29 495 39 HOH HOH . C 3 HOH A 30 496 41 HOH HOH . C 3 HOH A 31 497 44 HOH HOH . C 3 HOH A 32 498 47 HOH HOH . C 3 HOH A 33 499 49 HOH HOH . C 3 HOH A 34 500 50 HOH HOH . C 3 HOH A 35 501 51 HOH HOH . C 3 HOH A 36 502 53 HOH HOH . C 3 HOH A 37 503 54 HOH HOH . C 3 HOH A 38 504 55 HOH HOH . C 3 HOH A 39 505 56 HOH HOH . C 3 HOH A 40 506 58 HOH HOH . C 3 HOH A 41 507 62 HOH HOH . C 3 HOH A 42 508 64 HOH HOH . C 3 HOH A 43 509 66 HOH HOH . C 3 HOH A 44 510 67 HOH HOH . C 3 HOH A 45 511 69 HOH HOH . C 3 HOH A 46 512 70 HOH HOH . C 3 HOH A 47 513 74 HOH HOH . C 3 HOH A 48 514 77 HOH HOH . C 3 HOH A 49 515 79 HOH HOH . C 3 HOH A 50 516 83 HOH HOH . C 3 HOH A 51 517 87 HOH HOH . C 3 HOH A 52 518 92 HOH HOH . C 3 HOH A 53 519 93 HOH HOH . C 3 HOH A 54 520 94 HOH HOH . C 3 HOH A 55 521 95 HOH HOH . C 3 HOH A 56 522 96 HOH HOH . C 3 HOH A 57 523 97 HOH HOH . C 3 HOH A 58 524 99 HOH HOH . C 3 HOH A 59 525 100 HOH HOH . C 3 HOH A 60 526 102 HOH HOH . C 3 HOH A 61 527 104 HOH HOH . C 3 HOH A 62 528 105 HOH HOH . C 3 HOH A 63 529 106 HOH HOH . C 3 HOH A 64 530 107 HOH HOH . C 3 HOH A 65 531 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 37.392 37.34 31.957 1 35.11 ? PA FAD 1 A 1 HETATM 2 O O1A FAD . . . B 2 37.034 37.165 30.56 1 35.19 ? O1A FAD 1 A 1 HETATM 3 O O2A FAD . . . B 2 36.456 37.984 32.9 1 35.12 ? O2A FAD 1 A 1 HETATM 4 O O5B FAD . . . B 2 38.844 38.046 32.009 1 39.33 ? O5B FAD 1 A 1 HETATM 5 C C5B FAD . . . B 2 39.706 38.079 30.898 1 36.74 ? C5B FAD 1 A 1 HETATM 6 C C4B FAD . . . B 2 40.739 39.148 31.252 1 43.2 ? C4B FAD 1 A 1 HETATM 7 O O4B FAD . . . B 2 40.186 40.449 31.028 1 38.93 ? O4B FAD 1 A 1 HETATM 8 C C3B FAD . . . B 2 41.12 39.106 32.744 1 44 ? C3B FAD 1 A 1 HETATM 9 O O3B FAD . . . B 2 42.386 39.708 32.759 1 47.08 ? O3B FAD 1 A 1 HETATM 10 C C2B FAD . . . B 2 40.187 40.125 33.372 1 42.18 ? C2B FAD 1 A 1 HETATM 11 O O2B FAD . . . B 2 40.765 40.875 34.418 1 43.27 ? O2B FAD 1 A 1 HETATM 12 C C1B FAD . . . B 2 39.986 41.104 32.261 1 37.04 ? C1B FAD 1 A 1 HETATM 13 N N9A FAD . . . B 2 38.649 41.614 32.277 1 42.34 ? N9A FAD 1 A 1 HETATM 14 C C8A FAD . . . B 2 37.48 40.967 32.652 1 40.53 ? C8A FAD 1 A 1 HETATM 15 N N7A FAD . . . B 2 36.492 41.821 32.439 1 38.26 ? N7A FAD 1 A 1 HETATM 16 C C5A FAD . . . B 2 36.981 43 31.974 1 38.27 ? C5A FAD 1 A 1 HETATM 17 C C6A FAD . . . B 2 36.373 44.215 31.635 1 38.31 ? C6A FAD 1 A 1 HETATM 18 N N6A FAD . . . B 2 35.022 44.404 31.703 1 34.12 ? N6A FAD 1 A 1 HETATM 19 N N1A FAD . . . B 2 37.2 45.223 31.186 1 38.4 ? N1A FAD 1 A 1 HETATM 20 C C2A FAD . . . B 2 38.59 45.087 31.082 1 38.2 ? C2A FAD 1 A 1 HETATM 21 N N3A FAD . . . B 2 39.149 43.873 31.417 1 40.6 ? N3A FAD 1 A 1 HETATM 22 C C4A FAD . . . B 2 38.354 42.873 31.856 1 41.03 ? C4A FAD 1 A 1 HETATM 23 N N1 FAD . . . B 2 30.516 33.296 29.141 1 33.48 ? N1 FAD 1 A 1 HETATM 24 C C2 FAD . . . B 2 29.271 32.945 29.61 1 32.43 ? C2 FAD 1 A 1 HETATM 25 O O2 FAD . . . B 2 29.153 32.291 30.645 1 37.39 ? O2 FAD 1 A 1 HETATM 26 N N3 FAD . . . B 2 28.158 33.328 28.968 1 28.66 ? N3 FAD 1 A 1 HETATM 27 C C4 FAD . . . B 2 28.245 34.039 27.8 1 33.13 ? C4 FAD 1 A 1 HETATM 28 O O4 FAD . . . B 2 27.222 34.396 27.225 1 31.86 ? O4 FAD 1 A 1 HETATM 29 C C4X FAD . . . B 2 29.493 34.417 27.297 1 34.72 ? C4X FAD 1 A 1 HETATM 30 N N5 FAD . . . B 2 29.611 35.098 26.088 1 30.82 ? N5 FAD 1 A 1 HETATM 31 C C5X FAD . . . B 2 30.86 35.477 25.625 1 33.48 ? C5X FAD 1 A 1 HETATM 32 C C6 FAD . . . B 2 30.978 36.182 24.408 1 34.28 ? C6 FAD 1 A 1 HETATM 33 C C7 FAD . . . B 2 32.256 36.515 23.968 1 37.72 ? C7 FAD 1 A 1 HETATM 34 C C7M FAD . . . B 2 32.446 37.301 22.692 1 35.46 ? C7M FAD 1 A 1 HETATM 35 C C8 FAD . . . B 2 33.383 36.113 24.686 1 33.43 ? C8 FAD 1 A 1 HETATM 36 C C8M FAD . . . B 2 34.766 36.42 24.204 1 35.7 ? C8M FAD 1 A 1 HETATM 37 C C9 FAD . . . B 2 33.248 35.415 25.864 1 36.56 ? C9 FAD 1 A 1 HETATM 38 C C9A FAD . . . B 2 31.986 35.099 26.351 1 33.01 ? C9A FAD 1 A 1 HETATM 39 N N10 FAD . . . B 2 31.878 34.389 27.537 1 33.4 ? N10 FAD 1 A 1 HETATM 40 C C10 FAD . . . B 2 30.632 34.04 28.001 1 33.88 ? C10 FAD 1 A 1 HETATM 41 C C1' FAD . . . B 2 33.06 33.981 28.371 1 34.82 ? C1' FAD 1 A 1 HETATM 42 C C2' FAD . . . B 2 33.074 34.992 29.587 1 35.47 ? C2' FAD 1 A 1 HETATM 43 O O2' FAD . . . B 2 32.922 36.378 29.196 1 33.61 ? O2' FAD 1 A 1 HETATM 44 C C3' FAD . . . B 2 34.391 34.937 30.368 1 36.93 ? C3' FAD 1 A 1 HETATM 45 O O3' FAD . . . B 2 35.554 35.057 29.478 1 35.04 ? O3' FAD 1 A 1 HETATM 46 C C4' FAD . . . B 2 34.432 33.653 31.22 1 35.81 ? C4' FAD 1 A 1 HETATM 47 O O4' FAD . . . B 2 33.337 33.605 32.14 1 34.38 ? O4' FAD 1 A 1 HETATM 48 C C5' FAD . . . B 2 35.782 33.585 31.952 1 33.05 ? C5' FAD 1 A 1 HETATM 49 O O5' FAD . . . B 2 35.808 34.286 33.201 1 36.22 ? O5' FAD 1 A 1 HETATM 50 P P FAD . . . B 2 37.221 34.999 33.618 1 37.7 ? P FAD 1 A 1 HETATM 51 O O1P FAD . . . B 2 37.107 35.845 34.865 1 38.66 ? O1P FAD 1 A 1 HETATM 52 O O2P FAD . . . B 2 38.221 33.865 33.746 1 42.76 ? O2P FAD 1 A 1 HETATM 53 O O3P FAD . . . B 2 37.8 35.868 32.427 1 35.35 ? O3P FAD 1 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #