data_3AHT # _model_server_result.job_id uv29GwQsFmE682Qpygo9Wg _model_server_result.datetime_utc '2024-10-13 09:12:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3aht # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1003}' # _entry.id 3AHT # _exptl.entry_id 3AHT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AHT _cell.length_a 79.704 _cell.length_b 101.476 _cell.length_c 128.291 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AHT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,J 1 1 B,D,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 I N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 BGC _pdbx_entity_branch_link.comp_id_2 BGC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O3 _pdbx_entity_branch_link.leaving_atom_id_2 HO3 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C BGC 1 C 1 BGC A 1000 LB2 2 n C BGC 2 C 2 BGC A 1000 LB2 2 n D BGC 1 D 1 BGC B 1000 LB2 2 n D BGC 2 D 2 BGC B 1000 LB2 # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 200 A CYS 195 1_555 A SG CYS 203 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf2 B SG CYS 200 B CYS 195 1_555 B SG CYS 203 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? covale ? covale1 C O3 BGC . C BGC 1 1_555 C C1 BGC . C BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 sing covale ? covale2 D O3 BGC . D BGC 1 1_555 D C1 BGC . D BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 sing metalc ? metalc1 A OD2 ASP 70 A ASP 65 1_555 E ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc2 A ND1 HIS 73 A HIS 68 1_555 E ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc3 E ZN ZN . A ZN 1001 1_555 B OD2 ASP 70 B ASP 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc4 E ZN ZN . A ZN 1001 1_555 B ND1 HIS 73 B HIS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 242 n n O1 C6 MES sing 243 n n C2 C3 MES sing 244 n n C2 H21 MES sing 245 n n C2 H22 MES sing 246 n n C3 N4 MES sing 247 n n C3 H31 MES sing 248 n n C3 H32 MES sing 249 n n N4 C5 MES sing 250 n n N4 C7 MES sing 251 n n N4 HN4 MES sing 252 n n C5 C6 MES sing 253 n n C5 H51 MES sing 254 n n C5 H52 MES sing 255 n n C6 H61 MES sing 256 n n C6 H62 MES sing 257 n n C7 C8 MES sing 258 n n C7 H71 MES sing 259 n n C7 H72 MES sing 260 n n C8 S MES sing 261 n n C8 H81 MES sing 262 n n C8 H82 MES sing 263 n n S O1S MES doub 264 n n S O2S MES doub 265 n n S O3S MES sing 266 n n # _atom_sites.entry_id 3AHT _atom_sites.fract_transf_matrix[1][1] 0.012546 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009855 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007795 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 1001 1001 ZN ZN . F 4 SO4 A 1 1002 1002 SO4 SO4 . G 5 MES A 1 1003 1003 MES MES . H 4 SO4 B 1 1002 1002 SO4 SO4 . I 5 MES B 1 1003 1003 MES MES . J 6 HOH A 1 477 1 HOH HOH . J 6 HOH A 2 478 3 HOH HOH . J 6 HOH A 3 479 4 HOH HOH . J 6 HOH A 4 480 5 HOH HOH . J 6 HOH A 5 481 10 HOH HOH . J 6 HOH A 6 482 12 HOH HOH . J 6 HOH A 7 483 13 HOH HOH . J 6 HOH A 8 484 14 HOH HOH . J 6 HOH A 9 485 15 HOH HOH . J 6 HOH A 10 486 18 HOH HOH . J 6 HOH A 11 487 19 HOH HOH . J 6 HOH A 12 488 24 HOH HOH . J 6 HOH A 13 489 25 HOH HOH . J 6 HOH A 14 490 27 HOH HOH . J 6 HOH A 15 491 28 HOH HOH . J 6 HOH A 16 492 29 HOH HOH . J 6 HOH A 17 493 32 HOH HOH . J 6 HOH A 18 494 34 HOH HOH . J 6 HOH A 19 495 35 HOH HOH . J 6 HOH A 20 496 37 HOH HOH . J 6 HOH A 21 497 38 HOH HOH . J 6 HOH A 22 498 41 HOH HOH . J 6 HOH A 23 499 43 HOH HOH . J 6 HOH A 24 500 47 HOH HOH . J 6 HOH A 25 501 48 HOH HOH . J 6 HOH A 26 502 49 HOH HOH . J 6 HOH A 27 503 50 HOH HOH . J 6 HOH A 28 504 51 HOH HOH . J 6 HOH A 29 505 53 HOH HOH . J 6 HOH A 30 506 54 HOH HOH . J 6 HOH A 31 507 55 HOH HOH . J 6 HOH A 32 508 57 HOH HOH . J 6 HOH A 33 509 60 HOH HOH . J 6 HOH A 34 510 61 HOH HOH . J 6 HOH A 35 511 62 HOH HOH . J 6 HOH A 36 512 64 HOH HOH . J 6 HOH A 37 513 65 HOH HOH . J 6 HOH A 38 514 66 HOH HOH . J 6 HOH A 39 515 71 HOH HOH . K 6 HOH B 1 477 2 HOH HOH . K 6 HOH B 2 478 6 HOH HOH . K 6 HOH B 3 479 7 HOH HOH . K 6 HOH B 4 480 8 HOH HOH . K 6 HOH B 5 481 9 HOH HOH . K 6 HOH B 6 482 11 HOH HOH . K 6 HOH B 7 483 16 HOH HOH . K 6 HOH B 8 484 17 HOH HOH . K 6 HOH B 9 485 20 HOH HOH . K 6 HOH B 10 486 21 HOH HOH . K 6 HOH B 11 487 22 HOH HOH . K 6 HOH B 12 488 23 HOH HOH . K 6 HOH B 13 489 26 HOH HOH . K 6 HOH B 14 490 30 HOH HOH . K 6 HOH B 15 491 31 HOH HOH . K 6 HOH B 16 492 33 HOH HOH . K 6 HOH B 17 493 36 HOH HOH . K 6 HOH B 18 494 39 HOH HOH . K 6 HOH B 19 495 40 HOH HOH . K 6 HOH B 20 496 42 HOH HOH . K 6 HOH B 21 497 44 HOH HOH . K 6 HOH B 22 498 45 HOH HOH . K 6 HOH B 23 499 46 HOH HOH . K 6 HOH B 24 500 52 HOH HOH . K 6 HOH B 25 501 56 HOH HOH . K 6 HOH B 26 502 58 HOH HOH . K 6 HOH B 27 503 59 HOH HOH . K 6 HOH B 28 504 63 HOH HOH . K 6 HOH B 29 505 67 HOH HOH . K 6 HOH B 30 506 68 HOH HOH . K 6 HOH B 31 507 69 HOH HOH . K 6 HOH B 32 508 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . I 5 -27.195 -16.018 -28.828 1 45 ? O1 MES 1003 B 1 HETATM 2 C C2 MES . . . I 5 -27.133 -14.724 -28.227 1 44.72 ? C2 MES 1003 B 1 HETATM 3 C C3 MES . . . I 5 -25.829 -14.594 -27.445 1 44.75 ? C3 MES 1003 B 1 HETATM 4 N N4 MES . . . I 5 -24.767 -14.889 -28.402 1 44.76 ? N4 MES 1003 B 1 HETATM 5 C C5 MES . . . I 5 -24.795 -16.123 -29.179 1 45.05 ? C5 MES 1003 B 1 HETATM 6 C C6 MES . . . I 5 -26.18 -16.203 -29.818 1 44.86 ? C6 MES 1003 B 1 HETATM 7 C C7 MES . . . I 5 -23.672 -13.948 -28.581 1 44.27 ? C7 MES 1003 B 1 HETATM 8 C C8 MES . . . I 5 -22.55 -14.752 -29.23 1 44.13 ? C8 MES 1003 B 1 HETATM 9 S S MES . . . I 5 -21.058 -14.265 -28.663 1 43.77 ? S MES 1003 B 1 HETATM 10 O O1S MES . . . I 5 -20.812 -15.712 -28.427 1 44.29 ? O1S MES 1003 B 1 HETATM 11 O O2S MES . . . I 5 -21.753 -13.465 -27.625 1 44.99 ? O2S MES 1003 B 1 HETATM 12 O O3S MES . . . I 5 -20.87 -13.637 -29.994 1 44.3 ? O3S MES 1003 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 542 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #