data_3AM2 # _model_server_result.job_id ymX7WibA0OIQl2rEWkewTA _model_server_result.datetime_utc '2024-12-23 11:12:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3am2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 3AM2 # _exptl.entry_id 3AM2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AM2 _cell.length_a 101.03 _cell.length_b 101.03 _cell.length_c 101.03 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AM2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3AM2 _atom_sites.fract_transf_matrix[1][1] 0.009898 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009898 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UNX A 1 501 501 UNX UNX . C 2 UNX A 1 502 502 UNX UNX . D 2 UNX A 1 503 503 UNX UNX . E 3 GOL A 1 504 504 GOL GOL . F 4 HOH A 1 329 329 HOH HOH . F 4 HOH A 2 330 330 HOH HOH . F 4 HOH A 3 331 331 HOH HOH . F 4 HOH A 4 332 332 HOH HOH . F 4 HOH A 5 333 333 HOH HOH . F 4 HOH A 6 334 334 HOH HOH . F 4 HOH A 7 335 335 HOH HOH . F 4 HOH A 8 336 336 HOH HOH . F 4 HOH A 9 337 337 HOH HOH . F 4 HOH A 10 338 338 HOH HOH . F 4 HOH A 11 339 339 HOH HOH . F 4 HOH A 12 340 340 HOH HOH . F 4 HOH A 13 341 341 HOH HOH . F 4 HOH A 14 342 342 HOH HOH . F 4 HOH A 15 343 343 HOH HOH . F 4 HOH A 16 344 344 HOH HOH . F 4 HOH A 17 345 345 HOH HOH . F 4 HOH A 18 346 346 HOH HOH . F 4 HOH A 19 347 347 HOH HOH . F 4 HOH A 20 348 348 HOH HOH . F 4 HOH A 21 349 349 HOH HOH . F 4 HOH A 22 350 350 HOH HOH . F 4 HOH A 23 351 351 HOH HOH . F 4 HOH A 24 352 352 HOH HOH . F 4 HOH A 25 353 353 HOH HOH . F 4 HOH A 26 354 354 HOH HOH . F 4 HOH A 27 355 355 HOH HOH . F 4 HOH A 28 356 356 HOH HOH . F 4 HOH A 29 357 357 HOH HOH . F 4 HOH A 30 358 358 HOH HOH . F 4 HOH A 31 359 359 HOH HOH . F 4 HOH A 32 360 360 HOH HOH . F 4 HOH A 33 361 361 HOH HOH . F 4 HOH A 34 362 362 HOH HOH . F 4 HOH A 35 363 363 HOH HOH . F 4 HOH A 36 364 364 HOH HOH . F 4 HOH A 37 365 365 HOH HOH . F 4 HOH A 38 366 366 HOH HOH . F 4 HOH A 39 367 367 HOH HOH . F 4 HOH A 40 368 368 HOH HOH . F 4 HOH A 41 369 369 HOH HOH . F 4 HOH A 42 370 370 HOH HOH . F 4 HOH A 43 371 371 HOH HOH . F 4 HOH A 44 372 372 HOH HOH . F 4 HOH A 45 373 373 HOH HOH . F 4 HOH A 46 374 374 HOH HOH . F 4 HOH A 47 375 375 HOH HOH . F 4 HOH A 48 376 376 HOH HOH . F 4 HOH A 49 377 377 HOH HOH . F 4 HOH A 50 378 378 HOH HOH . F 4 HOH A 51 379 379 HOH HOH . F 4 HOH A 52 380 380 HOH HOH . F 4 HOH A 53 381 381 HOH HOH . F 4 HOH A 54 382 382 HOH HOH . F 4 HOH A 55 383 383 HOH HOH . F 4 HOH A 56 384 384 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 -4.438 21.723 -6.897 1 51.16 ? C1 GOL 504 A 1 HETATM 2 O O1 GOL . . . E 3 -5.325 22.701 -7.467 1 55.57 ? O1 GOL 504 A 1 HETATM 3 C C2 GOL . . . E 3 -3.134 22.211 -6.262 1 48.85 ? C2 GOL 504 A 1 HETATM 4 O O2 GOL . . . E 3 -3.416 23.143 -5.172 1 52.77 ? O2 GOL 504 A 1 HETATM 5 C C3 GOL . . . E 3 -2.16 22.737 -7.356 1 49.37 ? C3 GOL 504 A 1 HETATM 6 O O3 GOL . . . E 3 -0.813 22.255 -7.487 1 40.83 ? O3 GOL 504 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #