data_3AM4 # _model_server_result.job_id n-PtEFJg9IGYCPt-s41XGQ _model_server_result.datetime_utc '2024-10-13 22:17:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3am4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":802}' # _entry.id 3AM4 # _exptl.entry_id 3AM4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 283.107 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(2,4-dichlorophenoxy)-3-hydroxybenzaldehyde _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AM4 _cell.length_a 130.68 _cell.length_b 130.68 _cell.length_c 82.67 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AM4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 130.68 130.68 41.335 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C13 H8 Cl2 O3' _chem_comp.formula_weight 283.107 _chem_comp.id FT1 _chem_comp.mon_nstd_flag . _chem_comp.name 4-(2,4-dichlorophenoxy)-3-hydroxybenzaldehyde _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FT1 doub 83 n y C1 C6 FT1 sing 84 n y C1 O7 FT1 sing 85 n n C2 C3 FT1 sing 86 n y C2 O18 FT1 sing 87 n n C3 C4 FT1 doub 88 n y C4 C5 FT1 sing 89 n y C4 C14 FT1 sing 90 n n C5 C6 FT1 doub 91 n y O7 C8 FT1 sing 92 n n C8 C9 FT1 doub 93 n y C8 C13 FT1 sing 94 n y C9 C10 FT1 sing 95 n y C9 CL9 FT1 sing 96 n n C10 C11 FT1 doub 97 n y C11 C12 FT1 sing 98 n y C11 CL1 FT1 sing 99 n n C12 C13 FT1 doub 100 n y C14 O15 FT1 doub 101 n n C3 H3 FT1 sing 102 n n C5 H5 FT1 sing 103 n n C6 H6 FT1 sing 104 n n C10 H10 FT1 sing 105 n n C12 H12 FT1 sing 106 n n C13 H13 FT1 sing 107 n n C14 H14 FT1 sing 108 n n O18 HO18 FT1 sing 109 n n # _atom_sites.entry_id 3AM4 _atom_sites.fract_transf_matrix[1][1] 0.007652 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007652 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012096 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 801 801 NAD NAD . D 3 FT1 A 1 802 802 FT1 FT1 . E 2 NAD B 1 901 901 NAD NAD . F 3 FT1 B 1 902 902 FT1 FT1 . G 4 HOH A 1 1 1 HOH HOH . G 4 HOH A 2 2 2 HOH HOH . G 4 HOH A 3 4 4 HOH HOH . G 4 HOH A 4 9 9 HOH HOH . G 4 HOH A 5 10 10 HOH HOH . G 4 HOH A 6 12 12 HOH HOH . G 4 HOH A 7 13 13 HOH HOH . G 4 HOH A 8 14 14 HOH HOH . G 4 HOH A 9 17 17 HOH HOH . G 4 HOH A 10 20 20 HOH HOH . G 4 HOH A 11 24 24 HOH HOH . G 4 HOH A 12 29 29 HOH HOH . G 4 HOH A 13 30 30 HOH HOH . G 4 HOH A 14 31 31 HOH HOH . G 4 HOH A 15 32 32 HOH HOH . G 4 HOH A 16 33 33 HOH HOH . G 4 HOH A 17 36 36 HOH HOH . G 4 HOH A 18 37 37 HOH HOH . G 4 HOH A 19 39 39 HOH HOH . G 4 HOH A 20 42 42 HOH HOH . G 4 HOH A 21 47 47 HOH HOH . G 4 HOH A 22 48 48 HOH HOH . G 4 HOH A 23 50 50 HOH HOH . G 4 HOH A 24 51 51 HOH HOH . G 4 HOH A 25 52 52 HOH HOH . G 4 HOH A 26 53 53 HOH HOH . G 4 HOH A 27 55 55 HOH HOH . G 4 HOH A 28 57 57 HOH HOH . G 4 HOH A 29 58 58 HOH HOH . G 4 HOH A 30 60 60 HOH HOH . G 4 HOH A 31 62 62 HOH HOH . G 4 HOH A 32 63 63 HOH HOH . G 4 HOH A 33 64 64 HOH HOH . G 4 HOH A 34 65 65 HOH HOH . G 4 HOH A 35 67 67 HOH HOH . G 4 HOH A 36 71 71 HOH HOH . G 4 HOH A 37 72 72 HOH HOH . G 4 HOH A 38 74 74 HOH HOH . G 4 HOH A 39 75 75 HOH HOH . G 4 HOH A 40 76 76 HOH HOH . G 4 HOH A 41 77 77 HOH HOH . G 4 HOH A 42 79 79 HOH HOH . G 4 HOH A 43 80 80 HOH HOH . G 4 HOH A 44 81 81 HOH HOH . G 4 HOH A 45 84 84 HOH HOH . G 4 HOH A 46 85 85 HOH HOH . G 4 HOH A 47 86 86 HOH HOH . G 4 HOH A 48 89 89 HOH HOH . G 4 HOH A 49 90 90 HOH HOH . G 4 HOH A 50 91 91 HOH HOH . G 4 HOH A 51 92 92 HOH HOH . G 4 HOH A 52 94 94 HOH HOH . G 4 HOH A 53 425 96 HOH HOH . G 4 HOH A 54 426 98 HOH HOH . G 4 HOH A 55 427 99 HOH HOH . G 4 HOH A 56 428 100 HOH HOH . G 4 HOH A 57 429 101 HOH HOH . G 4 HOH A 58 430 103 HOH HOH . G 4 HOH A 59 431 104 HOH HOH . G 4 HOH A 60 432 105 HOH HOH . G 4 HOH A 61 433 106 HOH HOH . G 4 HOH A 62 434 110 HOH HOH . G 4 HOH A 63 435 111 HOH HOH . G 4 HOH A 64 436 113 HOH HOH . G 4 HOH A 65 437 114 HOH HOH . G 4 HOH A 66 438 115 HOH HOH . G 4 HOH A 67 439 116 HOH HOH . G 4 HOH A 68 440 120 HOH HOH . G 4 HOH A 69 441 123 HOH HOH . G 4 HOH A 70 442 127 HOH HOH . G 4 HOH A 71 443 128 HOH HOH . G 4 HOH A 72 444 129 HOH HOH . G 4 HOH A 73 445 131 HOH HOH . G 4 HOH A 74 446 132 HOH HOH . G 4 HOH A 75 447 133 HOH HOH . G 4 HOH A 76 448 134 HOH HOH . G 4 HOH A 77 449 140 HOH HOH . G 4 HOH A 78 450 141 HOH HOH . G 4 HOH A 79 451 142 HOH HOH . G 4 HOH A 80 452 143 HOH HOH . G 4 HOH A 81 453 147 HOH HOH . G 4 HOH A 82 454 149 HOH HOH . G 4 HOH A 83 455 150 HOH HOH . G 4 HOH A 84 456 152 HOH HOH . G 4 HOH A 85 457 153 HOH HOH . G 4 HOH A 86 458 155 HOH HOH . G 4 HOH A 87 459 157 HOH HOH . G 4 HOH A 88 460 158 HOH HOH . G 4 HOH A 89 461 159 HOH HOH . G 4 HOH A 90 462 161 HOH HOH . G 4 HOH A 91 463 163 HOH HOH . G 4 HOH A 92 464 164 HOH HOH . G 4 HOH A 93 465 165 HOH HOH . G 4 HOH A 94 466 169 HOH HOH . G 4 HOH A 95 467 170 HOH HOH . G 4 HOH A 96 468 171 HOH HOH . G 4 HOH A 97 469 172 HOH HOH . G 4 HOH A 98 470 173 HOH HOH . G 4 HOH A 99 471 179 HOH HOH . G 4 HOH A 100 472 182 HOH HOH . G 4 HOH A 101 473 183 HOH HOH . G 4 HOH A 102 474 186 HOH HOH . G 4 HOH A 103 475 187 HOH HOH . G 4 HOH A 104 476 190 HOH HOH . G 4 HOH A 105 477 191 HOH HOH . G 4 HOH A 106 478 198 HOH HOH . G 4 HOH A 107 479 202 HOH HOH . G 4 HOH A 108 480 203 HOH HOH . G 4 HOH A 109 481 204 HOH HOH . G 4 HOH A 110 482 207 HOH HOH . G 4 HOH A 111 483 208 HOH HOH . G 4 HOH A 112 484 209 HOH HOH . G 4 HOH A 113 485 210 HOH HOH . G 4 HOH A 114 486 212 HOH HOH . H 4 HOH B 1 3 3 HOH HOH . H 4 HOH B 2 5 5 HOH HOH . H 4 HOH B 3 6 6 HOH HOH . H 4 HOH B 4 7 7 HOH HOH . H 4 HOH B 5 8 8 HOH HOH . H 4 HOH B 6 11 11 HOH HOH . H 4 HOH B 7 15 15 HOH HOH . H 4 HOH B 8 16 16 HOH HOH . H 4 HOH B 9 18 18 HOH HOH . H 4 HOH B 10 19 19 HOH HOH . H 4 HOH B 11 21 21 HOH HOH . H 4 HOH B 12 22 22 HOH HOH . H 4 HOH B 13 23 23 HOH HOH . H 4 HOH B 14 25 25 HOH HOH . H 4 HOH B 15 26 26 HOH HOH . H 4 HOH B 16 27 27 HOH HOH . H 4 HOH B 17 28 28 HOH HOH . H 4 HOH B 18 34 34 HOH HOH . H 4 HOH B 19 35 35 HOH HOH . H 4 HOH B 20 38 38 HOH HOH . H 4 HOH B 21 40 40 HOH HOH . H 4 HOH B 22 41 41 HOH HOH . H 4 HOH B 23 43 43 HOH HOH . H 4 HOH B 24 44 44 HOH HOH . H 4 HOH B 25 45 45 HOH HOH . H 4 HOH B 26 46 46 HOH HOH . H 4 HOH B 27 49 49 HOH HOH . H 4 HOH B 28 54 54 HOH HOH . H 4 HOH B 29 56 56 HOH HOH . H 4 HOH B 30 59 59 HOH HOH . H 4 HOH B 31 61 61 HOH HOH . H 4 HOH B 32 66 66 HOH HOH . H 4 HOH B 33 68 68 HOH HOH . H 4 HOH B 34 69 69 HOH HOH . H 4 HOH B 35 70 70 HOH HOH . H 4 HOH B 36 73 73 HOH HOH . H 4 HOH B 37 78 78 HOH HOH . H 4 HOH B 38 82 82 HOH HOH . H 4 HOH B 39 83 83 HOH HOH . H 4 HOH B 40 87 87 HOH HOH . H 4 HOH B 41 88 88 HOH HOH . H 4 HOH B 42 93 93 HOH HOH . H 4 HOH B 43 95 95 HOH HOH . H 4 HOH B 44 425 97 HOH HOH . H 4 HOH B 45 426 102 HOH HOH . H 4 HOH B 46 427 107 HOH HOH . H 4 HOH B 47 428 108 HOH HOH . H 4 HOH B 48 429 109 HOH HOH . H 4 HOH B 49 430 112 HOH HOH . H 4 HOH B 50 431 117 HOH HOH . H 4 HOH B 51 432 118 HOH HOH . H 4 HOH B 52 433 119 HOH HOH . H 4 HOH B 53 434 121 HOH HOH . H 4 HOH B 54 435 122 HOH HOH . H 4 HOH B 55 436 124 HOH HOH . H 4 HOH B 56 437 125 HOH HOH . H 4 HOH B 57 438 126 HOH HOH . H 4 HOH B 58 439 130 HOH HOH . H 4 HOH B 59 440 135 HOH HOH . H 4 HOH B 60 441 136 HOH HOH . H 4 HOH B 61 442 137 HOH HOH . H 4 HOH B 62 443 138 HOH HOH . H 4 HOH B 63 444 139 HOH HOH . H 4 HOH B 64 445 144 HOH HOH . H 4 HOH B 65 446 145 HOH HOH . H 4 HOH B 66 447 146 HOH HOH . H 4 HOH B 67 448 148 HOH HOH . H 4 HOH B 68 449 151 HOH HOH . H 4 HOH B 69 450 154 HOH HOH . H 4 HOH B 70 451 156 HOH HOH . H 4 HOH B 71 452 160 HOH HOH . H 4 HOH B 72 453 162 HOH HOH . H 4 HOH B 73 454 166 HOH HOH . H 4 HOH B 74 455 167 HOH HOH . H 4 HOH B 75 456 168 HOH HOH . H 4 HOH B 76 457 174 HOH HOH . H 4 HOH B 77 458 175 HOH HOH . H 4 HOH B 78 459 176 HOH HOH . H 4 HOH B 79 460 177 HOH HOH . H 4 HOH B 80 461 178 HOH HOH . H 4 HOH B 81 462 180 HOH HOH . H 4 HOH B 82 463 181 HOH HOH . H 4 HOH B 83 464 184 HOH HOH . H 4 HOH B 84 465 185 HOH HOH . H 4 HOH B 85 466 188 HOH HOH . H 4 HOH B 86 467 189 HOH HOH . H 4 HOH B 87 468 192 HOH HOH . H 4 HOH B 88 469 193 HOH HOH . H 4 HOH B 89 470 194 HOH HOH . H 4 HOH B 90 471 195 HOH HOH . H 4 HOH B 91 472 196 HOH HOH . H 4 HOH B 92 473 197 HOH HOH . H 4 HOH B 93 474 199 HOH HOH . H 4 HOH B 94 475 200 HOH HOH . H 4 HOH B 95 476 201 HOH HOH . H 4 HOH B 96 477 205 HOH HOH . H 4 HOH B 97 478 206 HOH HOH . H 4 HOH B 98 479 211 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FT1 . . . D 3 49.927 92.028 34.608 1 50.81 ? C1 FT1 802 A 1 HETATM 2 C C2 FT1 . . . D 3 48.964 92.419 33.681 1 50.99 ? C2 FT1 802 A 1 HETATM 3 C C3 FT1 . . . D 3 48.721 93.774 33.46 1 50.9 ? C3 FT1 802 A 1 HETATM 4 C C4 FT1 . . . D 3 49.456 94.742 34.155 1 51.46 ? C4 FT1 802 A 1 HETATM 5 C C5 FT1 . . . D 3 50.441 94.358 35.071 1 49.85 ? C5 FT1 802 A 1 HETATM 6 C C6 FT1 . . . D 3 50.677 93.005 35.305 1 51.02 ? C6 FT1 802 A 1 HETATM 7 O O7 FT1 . . . D 3 50.181 90.688 34.818 1 48.49 ? O7 FT1 802 A 1 HETATM 8 C C8 FT1 . . . D 3 51.232 90.094 34.137 1 47.87 ? C8 FT1 802 A 1 HETATM 9 C C9 FT1 . . . D 3 51.652 88.822 34.483 1 46.83 ? C9 FT1 802 A 1 HETATM 10 C C10 FT1 . . . D 3 52.716 88.225 33.803 1 46.77 ? C10 FT1 802 A 1 HETATM 11 C C11 FT1 . . . D 3 53.369 88.913 32.779 1 46.24 ? C11 FT1 802 A 1 HETATM 12 C C12 FT1 . . . D 3 52.964 90.199 32.423 1 45.4 ? C12 FT1 802 A 1 HETATM 13 C C13 FT1 . . . D 3 51.903 90.787 33.101 1 47.5 ? C13 FT1 802 A 1 HETATM 14 C C14 FT1 . . . D 3 49.169 96.176 33.898 1 51.74 ? C14 FT1 802 A 1 HETATM 15 O O15 FT1 . . . D 3 49.601 97.047 34.64 1 54.01 ? O15 FT1 802 A 1 HETATM 16 CL CL1 FT1 . . . D 3 54.74 88.137 31.915 1 46.82 ? CL1 FT1 802 A 1 HETATM 17 CL CL9 FT1 . . . D 3 50.842 87.919 35.805 1 49.42 ? CL9 FT1 802 A 1 HETATM 18 O O18 FT1 . . . D 3 48.233 91.487 32.994 1 54.01 ? O18 FT1 802 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #