data_3AM6 # _model_server_result.job_id Q9CwLZ0uiufU87t-k6IuxQ _model_server_result.datetime_utc '2024-10-11 07:17:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3am6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":401}' # _entry.id 3AM6 # _exptl.entry_id 3AM6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AM6 _cell.length_a 84.12 _cell.length_b 110.487 _cell.length_c 129.116 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AM6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 PISA tetrameric 4 software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G 1 1 B,H,I,J 2 1 C,K,L,M 3 1 D,N,O,P 4 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 I N N ? 3 J N N ? 3 L N N ? 3 M N N ? 3 O N N ? 3 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 211 A LYS 211 1_555 E C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? covale ? covale2 B NZ LYS 211 B LYS 211 1_555 H C15 RET . B RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? covale ? covale3 C NZ LYS 211 C LYS 211 1_555 K C15 RET . C RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale4 D NZ LYS 211 D LYS 211 1_555 N C15 RET . D RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3AM6 _atom_sites.fract_transf_matrix[1][1] 0.011888 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009051 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007745 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 RET A 1 301 301 RET RET . F 3 CLR A 1 401 401 CLR CLR . G 3 CLR A 1 402 402 CLR CLR . H 2 RET B 1 301 301 RET RET . I 3 CLR B 1 401 401 CLR CLR . J 3 CLR B 1 402 402 CLR CLR . K 2 RET C 1 301 301 RET RET . L 3 CLR C 1 401 401 CLR CLR . M 3 CLR C 1 402 402 CLR CLR . N 2 RET D 1 301 301 RET RET . O 3 CLR D 1 401 401 CLR CLR . P 3 CLR D 1 402 402 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . L 3 -29.536 16.974 34.831 1 5.92 ? C1 CLR 401 C 1 HETATM 2 C C2 CLR . . . L 3 -30.088 18.422 34.728 1 6.91 ? C2 CLR 401 C 1 HETATM 3 C C3 CLR . . . L 3 -28.914 19.371 34.413 1 8.57 ? C3 CLR 401 C 1 HETATM 4 C C4 CLR . . . L 3 -28.117 19.011 33.09 1 9.43 ? C4 CLR 401 C 1 HETATM 5 C C5 CLR . . . L 3 -27.692 17.529 33.234 1 7.47 ? C5 CLR 401 C 1 HETATM 6 C C6 CLR . . . L 3 -26.423 17.228 33.073 1 7.87 ? C6 CLR 401 C 1 HETATM 7 C C7 CLR . . . L 3 -25.941 15.783 33.223 1 7 ? C7 CLR 401 C 1 HETATM 8 C C8 CLR . . . L 3 -27.062 14.759 32.976 1 5.86 ? C8 CLR 401 C 1 HETATM 9 C C9 CLR . . . L 3 -28.177 15.091 33.755 1 5.33 ? C9 CLR 401 C 1 HETATM 10 C C10 CLR . . . L 3 -28.76 16.526 33.56 1 5.92 ? C10 CLR 401 C 1 HETATM 11 C C11 CLR . . . L 3 -29.35 14.026 33.607 1 5.09 ? C11 CLR 401 C 1 HETATM 12 C C12 CLR . . . L 3 -28.804 12.613 33.945 1 4.46 ? C12 CLR 401 C 1 HETATM 13 C C13 CLR . . . L 3 -27.639 12.229 33.029 1 5.92 ? C13 CLR 401 C 1 HETATM 14 C C14 CLR . . . L 3 -26.538 13.318 33.261 1 6.3 ? C14 CLR 401 C 1 HETATM 15 C C15 CLR . . . L 3 -25.339 12.735 32.46 1 5.81 ? C15 CLR 401 C 1 HETATM 16 C C16 CLR . . . L 3 -25.433 11.25 32.952 1 4.92 ? C16 CLR 401 C 1 HETATM 17 C C17 CLR . . . L 3 -26.879 10.912 33.364 1 5.69 ? C17 CLR 401 C 1 HETATM 18 C C18 CLR . . . L 3 -28.096 12.241 31.524 1 6.81 ? C18 CLR 401 C 1 HETATM 19 C C19 CLR . . . L 3 -29.692 16.499 32.319 1 5.85 ? C19 CLR 401 C 1 HETATM 20 C C20 CLR . . . L 3 -27.373 9.566 32.732 1 5.04 ? C20 CLR 401 C 1 HETATM 21 C C21 CLR . . . L 3 -28.832 9.267 33.183 1 5.34 ? C21 CLR 401 C 1 HETATM 22 C C22 CLR . . . L 3 -26.434 8.471 33.272 1 4.51 ? C22 CLR 401 C 1 HETATM 23 C C23 CLR . . . L 3 -26.776 7.063 32.785 1 5.53 ? C23 CLR 401 C 1 HETATM 24 C C24 CLR . . . L 3 -25.781 6.081 33.441 1 5.35 ? C24 CLR 401 C 1 HETATM 25 C C25 CLR . . . L 3 -26.046 4.613 33.047 1 4.57 ? C25 CLR 401 C 1 HETATM 26 C C26 CLR . . . L 3 -25.008 3.743 33.732 1 3.23 ? C26 CLR 401 C 1 HETATM 27 C C27 CLR . . . L 3 -27.431 4.144 33.516 1 3.85 ? C27 CLR 401 C 1 HETATM 28 O O1 CLR . . . L 3 -29.399 20.74 34.351 1 8.84 ? O1 CLR 401 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 28 #