data_3AM6 # _model_server_result.job_id BGjpYtVF-0stZcMgTylZvw _model_server_result.datetime_utc '2024-10-11 07:23:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3am6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":402}' # _entry.id 3AM6 # _exptl.entry_id 3AM6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AM6 _cell.length_a 84.12 _cell.length_b 110.487 _cell.length_c 129.116 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AM6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 PISA tetrameric 4 software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G 1 1 B,H,I,J 2 1 C,K,L,M 3 1 D,N,O,P 4 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 I N N ? 3 J N N ? 3 L N N ? 3 M N N ? 3 O N N ? 3 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 211 A LYS 211 1_555 E C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? covale ? covale2 B NZ LYS 211 B LYS 211 1_555 H C15 RET . B RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? covale ? covale3 C NZ LYS 211 C LYS 211 1_555 K C15 RET . C RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale4 D NZ LYS 211 D LYS 211 1_555 N C15 RET . D RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3AM6 _atom_sites.fract_transf_matrix[1][1] 0.011888 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009051 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007745 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 RET A 1 301 301 RET RET . F 3 CLR A 1 401 401 CLR CLR . G 3 CLR A 1 402 402 CLR CLR . H 2 RET B 1 301 301 RET RET . I 3 CLR B 1 401 401 CLR CLR . J 3 CLR B 1 402 402 CLR CLR . K 2 RET C 1 301 301 RET RET . L 3 CLR C 1 401 401 CLR CLR . M 3 CLR C 1 402 402 CLR CLR . N 2 RET D 1 301 301 RET RET . O 3 CLR D 1 401 401 CLR CLR . P 3 CLR D 1 402 402 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . M 3 -32.863 16.016 33.458 1 28.9 ? C1 CLR 402 C 1 HETATM 2 C C2 CLR . . . M 3 -33.347 17.472 33.799 1 28.75 ? C2 CLR 402 C 1 HETATM 3 C C3 CLR . . . M 3 -34.455 17.876 32.773 1 28.81 ? C3 CLR 402 C 1 HETATM 4 C C4 CLR . . . M 3 -35.683 16.934 32.742 1 28.05 ? C4 CLR 402 C 1 HETATM 5 C C5 CLR . . . M 3 -35.107 15.541 32.511 1 28.01 ? C5 CLR 402 C 1 HETATM 6 C C6 CLR . . . M 3 -35.561 14.897 31.492 1 28.09 ? C6 CLR 402 C 1 HETATM 7 C C7 CLR . . . M 3 -35.036 13.51 31.153 1 28.41 ? C7 CLR 402 C 1 HETATM 8 C C8 CLR . . . M 3 -34.512 12.761 32.391 1 27.61 ? C8 CLR 402 C 1 HETATM 9 C C9 CLR . . . M 3 -33.548 13.563 33.032 1 27.63 ? C9 CLR 402 C 1 HETATM 10 C C10 CLR . . . M 3 -34.037 15.002 33.459 1 28.09 ? C10 CLR 402 C 1 HETATM 11 C C11 CLR . . . M 3 -32.891 12.818 34.279 1 27.11 ? C11 CLR 402 C 1 HETATM 12 C C12 CLR . . . M 3 -32.333 11.397 33.853 1 26.92 ? C12 CLR 402 C 1 HETATM 13 C C13 CLR . . . M 3 -33.473 10.57 33.249 1 26.45 ? C13 CLR 402 C 1 HETATM 14 C C14 CLR . . . M 3 -33.954 11.375 31.981 1 27.28 ? C14 CLR 402 C 1 HETATM 15 C C15 CLR . . . M 3 -34.909 10.395 31.288 1 27.63 ? C15 CLR 402 C 1 HETATM 16 C C16 CLR . . . M 3 -34.094 9.095 31.431 1 26.97 ? C16 CLR 402 C 1 HETATM 17 C C17 CLR . . . M 3 -33.168 9.152 32.64 1 25.59 ? C17 CLR 402 C 1 HETATM 18 C C18 CLR . . . M 3 -34.667 10.487 34.281 1 27.87 ? C18 CLR 402 C 1 HETATM 19 C C19 CLR . . . M 3 -34.646 14.915 34.89 1 28.39 ? C19 CLR 402 C 1 HETATM 20 C C20 CLR . . . M 3 -33.45 7.913 33.554 1 23.08 ? C20 CLR 402 C 1 HETATM 21 C C21 CLR . . . M 3 -32.498 7.969 34.766 1 23.14 ? C21 CLR 402 C 1 HETATM 22 C C22 CLR . . . M 3 -33.149 6.644 32.736 1 21.18 ? C22 CLR 402 C 1 HETATM 23 C C23 CLR . . . M 3 -33.398 5.342 33.487 1 19.07 ? C23 CLR 402 C 1 HETATM 24 C C24 CLR . . . M 3 -33.053 4.231 32.496 1 19.27 ? C24 CLR 402 C 1 HETATM 25 C C25 CLR . . . M 3 -33.252 2.829 33.071 1 18.9 ? C25 CLR 402 C 1 HETATM 26 C C26 CLR . . . M 3 -32.888 1.824 31.986 1 18.43 ? C26 CLR 402 C 1 HETATM 27 C C27 CLR . . . M 3 -32.33 2.589 34.26 1 20 ? C27 CLR 402 C 1 HETATM 28 O O1 CLR . . . M 3 -34.91 19.203 33.025 1 28.4 ? O1 CLR 402 C 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #