data_3AMY
#
_model_server_result.job_id            Dt1k1Ndc_dMmm7C5eWRvig 
_model_server_result.datetime_utc      '2024-11-22 19:27:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3amy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":337}' 
#
_entry.id    3AMY 
#
_exptl.entry_id    3AMY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3AMY 
_cell.length_a            48.63 
_cell.length_b            73.03 
_cell.length_c            77.39 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3AMY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 115 n n 
C1 C2 EDO sing 116 n n 
C1 H11 EDO sing 117 n n 
C1 H12 EDO sing 118 n n 
O1 HO1 EDO sing 119 n n 
C2 O2 EDO sing 120 n n 
C2 H21 EDO sing 121 n n 
C2 H22 EDO sing 122 n n 
O2 HO2 EDO sing 123 n n 
#
_atom_sites.entry_id                     3AMY 
_atom_sites.fract_transf_matrix[1][1]    0.020563 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013693 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012922 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 AGI A 1 336 1 AGI DRG . 
C 3 EDO A 1 337 1 EDO EDO . 
D 4 HOH A 1 338 1 HOH HOH . 
D 4 HOH A 2 339 2 HOH HOH . 
D 4 HOH A 3 340 3 HOH HOH . 
D 4 HOH A 4 341 4 HOH HOH . 
D 4 HOH A 5 342 5 HOH HOH . 
D 4 HOH A 6 343 6 HOH HOH . 
D 4 HOH A 7 344 7 HOH HOH . 
D 4 HOH A 8 345 8 HOH HOH . 
D 4 HOH A 9 346 9 HOH HOH . 
D 4 HOH A 10 347 10 HOH HOH . 
D 4 HOH A 11 348 11 HOH HOH . 
D 4 HOH A 12 349 12 HOH HOH . 
D 4 HOH A 13 350 13 HOH HOH . 
D 4 HOH A 14 351 14 HOH HOH . 
D 4 HOH A 15 352 15 HOH HOH . 
D 4 HOH A 16 353 16 HOH HOH . 
D 4 HOH A 17 354 17 HOH HOH . 
D 4 HOH A 18 355 18 HOH HOH . 
D 4 HOH A 19 356 19 HOH HOH . 
D 4 HOH A 20 357 20 HOH HOH . 
D 4 HOH A 21 358 21 HOH HOH . 
D 4 HOH A 22 359 22 HOH HOH . 
D 4 HOH A 23 360 23 HOH HOH . 
D 4 HOH A 24 361 24 HOH HOH . 
D 4 HOH A 25 362 25 HOH HOH . 
D 4 HOH A 26 363 26 HOH HOH . 
D 4 HOH A 27 364 27 HOH HOH . 
D 4 HOH A 28 365 28 HOH HOH . 
D 4 HOH A 29 366 29 HOH HOH . 
D 4 HOH A 30 367 30 HOH HOH . 
D 4 HOH A 31 368 31 HOH HOH . 
D 4 HOH A 32 369 32 HOH HOH . 
D 4 HOH A 33 370 33 HOH HOH . 
D 4 HOH A 34 371 34 HOH HOH . 
D 4 HOH A 35 372 35 HOH HOH . 
D 4 HOH A 36 373 36 HOH HOH . 
D 4 HOH A 37 374 37 HOH HOH . 
D 4 HOH A 38 375 38 HOH HOH . 
D 4 HOH A 39 376 39 HOH HOH . 
D 4 HOH A 40 377 40 HOH HOH . 
D 4 HOH A 41 378 41 HOH HOH . 
D 4 HOH A 42 379 42 HOH HOH . 
D 4 HOH A 43 380 43 HOH HOH . 
D 4 HOH A 44 381 44 HOH HOH . 
D 4 HOH A 45 382 45 HOH HOH . 
D 4 HOH A 46 383 46 HOH HOH . 
D 4 HOH A 47 384 47 HOH HOH . 
D 4 HOH A 48 385 48 HOH HOH . 
D 4 HOH A 49 386 49 HOH HOH . 
D 4 HOH A 50 387 50 HOH HOH . 
D 4 HOH A 51 388 51 HOH HOH . 
D 4 HOH A 52 389 52 HOH HOH . 
D 4 HOH A 53 390 53 HOH HOH . 
D 4 HOH A 54 391 54 HOH HOH . 
D 4 HOH A 55 392 55 HOH HOH . 
D 4 HOH A 56 393 56 HOH HOH . 
D 4 HOH A 57 394 57 HOH HOH . 
D 4 HOH A 58 395 58 HOH HOH . 
D 4 HOH A 59 396 59 HOH HOH . 
D 4 HOH A 60 397 60 HOH HOH . 
D 4 HOH A 61 398 61 HOH HOH . 
D 4 HOH A 62 399 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 -8.222 2.855 14.638 1 23.37 ? C1 EDO 337 A 1 
HETATM 2 O O1 EDO . . . C 3 -8.605 4.232 14.712 1 24.23 ? O1 EDO 337 A 1 
HETATM 3 C C2 EDO . . . C 3 -8.207 2.266 16.04 1 22.4 ? C2 EDO 337 A 1 
HETATM 4 O O2 EDO . . . C 3 -8.173 0.844 15.918 1 22.27 ? O2 EDO 337 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           441 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#