data_3AO1 # _model_server_result.job_id rzdFHoHL5EFXbrQoD9CA7A _model_server_result.datetime_utc '2024-11-04 20:15:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ao1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":214}' # _entry.id 3AO1 # _exptl.entry_id 3AO1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 138.121 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,3-benzodioxol-5-ol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AO1 _cell.length_a 60.587 _cell.length_b 61.997 _cell.length_c 81.765 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AO1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 K O HOH . A HOH 30 1_555 D CD CD . A CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc2 A SG CYS 16 A CYS 65 1_555 C CD CD . A CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc3 A SG CYS 16 A CYS 65 1_555 D CD CD . A CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc4 A NE2 HIS 18 A HIS 67 1_555 C CD CD . A CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc5 A OE2 GLU 43 A GLU 92 1_555 C CD CD . A CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc6 A OE1 GLU 43 A GLU 92 1_555 D CD CD . A CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc7 A OD2 ASP 67 A ASP 116 1_555 D CD CD . A CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc8 L O HOH . B HOH 3 1_555 H CD CD . B CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc9 B SG CYS 16 B CYS 65 1_555 H CD CD . B CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc10 B SG CYS 16 B CYS 65 1_555 I CD CD . B CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc11 B NE2 HIS 18 B HIS 67 1_555 I CD CD . B CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc12 B OE2 GLU 43 B GLU 92 1_555 H CD CD . B CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc13 B OE1 GLU 43 B GLU 92 1_555 I CD CD . B CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc14 B OD2 ASP 67 B ASP 116 1_555 H CD CD . B CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? # _chem_comp.formula 'C7 H6 O3' _chem_comp.formula_weight 138.121 _chem_comp.id BZX _chem_comp.mon_nstd_flag . _chem_comp.name 1,3-benzodioxol-5-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BZX doub 70 n y C1 C6 BZX sing 71 n y C2 C3 BZX sing 72 n y C2 O10 BZX sing 73 n n C3 C4 BZX doub 74 n y C4 C5 BZX sing 75 n y C5 C6 BZX doub 76 n y C5 O9 BZX sing 77 n n C6 O7 BZX sing 78 n n O7 C8 BZX sing 79 n n C8 O9 BZX sing 80 n n C1 H1 BZX sing 81 n n C3 H3 BZX sing 82 n n C4 H4 BZX sing 83 n n C8 H8 BZX sing 84 n n C8 H8A BZX sing 85 n n O10 HO10 BZX sing 86 n n # _atom_sites.entry_id 3AO1 _atom_sites.fract_transf_matrix[1][1] 0.016505 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01613 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01223 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 1003 1003 CD CD . D 2 CD A 1 1004 1004 CD CD . E 3 SO4 A 1 1 1 SO4 SO4 . F 4 BZX A 1 213 1 BZX BZX . G 4 BZX A 1 214 1 BZX BZX . H 2 CD B 1 1001 1001 CD CD . I 2 CD B 1 1002 1002 CD CD . J 4 BZX B 1 1 1 BZX BZX . K 5 HOH A 1 4 4 HOH HOH . K 5 HOH A 2 5 5 HOH HOH . K 5 HOH A 3 8 8 HOH HOH . K 5 HOH A 4 9 9 HOH HOH . K 5 HOH A 5 11 11 HOH HOH . K 5 HOH A 6 14 14 HOH HOH . K 5 HOH A 7 15 15 HOH HOH . K 5 HOH A 8 16 16 HOH HOH . K 5 HOH A 9 17 17 HOH HOH . K 5 HOH A 10 23 23 HOH HOH . K 5 HOH A 11 24 24 HOH HOH . K 5 HOH A 12 26 26 HOH HOH . K 5 HOH A 13 27 27 HOH HOH . K 5 HOH A 14 29 29 HOH HOH . K 5 HOH A 15 30 30 HOH HOH . K 5 HOH A 16 31 31 HOH HOH . K 5 HOH A 17 32 32 HOH HOH . K 5 HOH A 18 33 33 HOH HOH . K 5 HOH A 19 34 34 HOH HOH . K 5 HOH A 20 35 35 HOH HOH . K 5 HOH A 21 37 37 HOH HOH . K 5 HOH A 22 38 38 HOH HOH . K 5 HOH A 23 39 39 HOH HOH . K 5 HOH A 24 40 40 HOH HOH . K 5 HOH A 25 42 42 HOH HOH . K 5 HOH A 26 44 44 HOH HOH . K 5 HOH A 27 46 46 HOH HOH . K 5 HOH A 28 215 51 HOH HOH . K 5 HOH A 29 216 55 HOH HOH . K 5 HOH A 30 217 56 HOH HOH . K 5 HOH A 31 218 57 HOH HOH . K 5 HOH A 32 219 60 HOH HOH . K 5 HOH A 33 220 61 HOH HOH . K 5 HOH A 34 221 64 HOH HOH . L 5 HOH B 1 2 2 HOH HOH . L 5 HOH B 2 3 3 HOH HOH . L 5 HOH B 3 6 6 HOH HOH . L 5 HOH B 4 7 7 HOH HOH . L 5 HOH B 5 10 10 HOH HOH . L 5 HOH B 6 12 12 HOH HOH . L 5 HOH B 7 13 13 HOH HOH . L 5 HOH B 8 18 18 HOH HOH . L 5 HOH B 9 19 19 HOH HOH . L 5 HOH B 10 20 20 HOH HOH . L 5 HOH B 11 21 21 HOH HOH . L 5 HOH B 12 22 22 HOH HOH . L 5 HOH B 13 25 25 HOH HOH . L 5 HOH B 14 28 28 HOH HOH . L 5 HOH B 15 36 36 HOH HOH . L 5 HOH B 16 41 41 HOH HOH . L 5 HOH B 17 43 43 HOH HOH . L 5 HOH B 18 45 45 HOH HOH . L 5 HOH B 19 47 47 HOH HOH . L 5 HOH B 20 48 48 HOH HOH . L 5 HOH B 21 49 49 HOH HOH . L 5 HOH B 22 213 1 HOH HOH . L 5 HOH B 23 214 50 HOH HOH . L 5 HOH B 24 215 52 HOH HOH . L 5 HOH B 25 216 53 HOH HOH . L 5 HOH B 26 217 54 HOH HOH . L 5 HOH B 27 218 58 HOH HOH . L 5 HOH B 28 219 59 HOH HOH . L 5 HOH B 29 220 62 HOH HOH . L 5 HOH B 30 221 63 HOH HOH . L 5 HOH B 31 222 65 HOH HOH . L 5 HOH B 32 223 66 HOH HOH . L 5 HOH B 33 224 67 HOH HOH . L 5 HOH B 34 225 68 HOH HOH . L 5 HOH B 35 226 69 HOH HOH . L 5 HOH B 36 227 70 HOH HOH . L 5 HOH B 37 228 71 HOH HOH . L 5 HOH B 38 229 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BZX . . . G 4 25.867 6.85 4.832 0.54 38.57 ? C1 BZX 214 A 1 HETATM 2 C C2 BZX . . . G 4 25.068 7.887 5.317 0.54 38.1 ? C2 BZX 214 A 1 HETATM 3 C C3 BZX . . . G 4 25.341 8.54 6.53 0.54 38.31 ? C3 BZX 214 A 1 HETATM 4 C C4 BZX . . . G 4 26.431 8.196 7.338 0.54 39.85 ? C4 BZX 214 A 1 HETATM 5 C C5 BZX . . . G 4 27.238 7.171 6.866 0.54 41.69 ? C5 BZX 214 A 1 HETATM 6 C C6 BZX . . . G 4 26.95 6.495 5.61 0.54 39.59 ? C6 BZX 214 A 1 HETATM 7 O O7 BZX . . . G 4 27.895 5.536 5.416 0.54 42.68 ? O7 BZX 214 A 1 HETATM 8 C C8 BZX . . . G 4 28.694 5.436 6.612 0.54 44.55 ? C8 BZX 214 A 1 HETATM 9 O O9 BZX . . . G 4 28.358 6.6 7.399 0.54 45.47 ? O9 BZX 214 A 1 HETATM 10 O O10 BZX . . . G 4 23.995 8.27 4.573 0.54 38.79 ? O10 BZX 214 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #