data_3AO4 # _model_server_result.job_id w2nAwVKxQioSyXjAJIXtWw _model_server_result.datetime_utc '2024-11-22 08:46:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ao4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1}' # _entry.id 3AO4 # _exptl.entry_id 3AO4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 217.224 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(1,3-benzodioxol-5-yl)-1-methyl-1H-pyrazol-5-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3AO4 _cell.length_a 48.2 _cell.length_b 48.2 _cell.length_c 103.6 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AO4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 N O HOH . A HOH 6 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc2 N O HOH . A HOH 19 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc3 A SG CYS 16 A CYS 65 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc4 A SG CYS 16 A CYS 65 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc5 A NE2 HIS 18 A HIS 67 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc6 A OE2 GLU 43 A GLU 92 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc7 A OD2 ASP 67 A ASP 116 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc8 O O HOH . B HOH 31 1_555 J CD CD . B CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc9 O O HOH . B HOH 45 1_555 J CD CD . B CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc10 B SG CYS 16 B CYS 65 1_555 I CD CD . B CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc11 B SG CYS 16 B CYS 65 1_555 J CD CD . B CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc12 B NE2 HIS 18 B HIS 67 1_555 I CD CD . B CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc13 B OE2 GLU 43 B GLU 92 1_555 J CD CD . B CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc14 B OD2 ASP 67 B ASP 116 1_555 J CD CD . B CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? # _chem_comp.formula 'C11 H11 N3 O2' _chem_comp.formula_weight 217.224 _chem_comp.id 833 _chem_comp.mon_nstd_flag . _chem_comp.name 3-(1,3-benzodioxol-5-yl)-1-methyl-1H-pyrazol-5-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 833 doub 1 n y C1 C6 833 sing 2 n y C2 C3 833 sing 3 n y C2 C10 833 sing 4 n y C3 C4 833 doub 5 n y C4 C5 833 sing 6 n y C5 C6 833 doub 7 n y C5 O9 833 sing 8 n n C6 O7 833 sing 9 n n O7 C8 833 sing 10 n n C8 O9 833 sing 11 n n C10 C11 833 sing 12 n y C10 N14 833 doub 13 n y C11 C12 833 doub 14 n y C12 N13 833 sing 15 n y C12 N15 833 sing 16 n n N13 N14 833 sing 17 n y N13 C16 833 sing 18 n n C1 H1 833 sing 19 n n C3 H3 833 sing 20 n n C4 H4 833 sing 21 n n C8 H8 833 sing 22 n n C8 H8A 833 sing 23 n n C11 H11 833 sing 24 n n N15 HN15 833 sing 25 n n N15 HN1A 833 sing 26 n n C16 H16 833 sing 27 n n C16 H16A 833 sing 28 n n C16 H16B 833 sing 29 n n # _atom_sites.entry_id 3AO4 _atom_sites.fract_transf_matrix[1][1] 0.020747 _atom_sites.fract_transf_matrix[1][2] 0.011978 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023956 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009653 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 1001 1001 CD CD . D 2 CD A 1 1002 1002 CD CD . E 3 CL A 1 501 501 CL CL . F 4 SO4 A 1 752 752 SO4 SO4 . G 4 SO4 A 1 753 753 SO4 SO4 . H 5 833 A 1 1 1 833 833 . I 2 CD B 1 1003 1003 CD CD . J 2 CD B 1 1004 1004 CD CD . K 3 CL B 1 502 502 CL CL . L 4 SO4 B 1 751 751 SO4 SO4 . M 5 833 B 1 1 1 833 833 . N 6 HOH A 1 2 2 HOH HOH . N 6 HOH A 2 5 5 HOH HOH . N 6 HOH A 3 6 6 HOH HOH . N 6 HOH A 4 8 8 HOH HOH . N 6 HOH A 5 9 9 HOH HOH . N 6 HOH A 6 11 11 HOH HOH . N 6 HOH A 7 13 13 HOH HOH . N 6 HOH A 8 17 17 HOH HOH . N 6 HOH A 9 18 18 HOH HOH . N 6 HOH A 10 19 19 HOH HOH . N 6 HOH A 11 21 21 HOH HOH . N 6 HOH A 12 24 24 HOH HOH . N 6 HOH A 13 27 27 HOH HOH . N 6 HOH A 14 29 29 HOH HOH . N 6 HOH A 15 30 30 HOH HOH . N 6 HOH A 16 32 32 HOH HOH . N 6 HOH A 17 33 33 HOH HOH . N 6 HOH A 18 34 34 HOH HOH . N 6 HOH A 19 36 36 HOH HOH . N 6 HOH A 20 38 38 HOH HOH . N 6 HOH A 21 40 40 HOH HOH . N 6 HOH A 22 42 42 HOH HOH . N 6 HOH A 23 43 43 HOH HOH . N 6 HOH A 24 46 46 HOH HOH . N 6 HOH A 25 213 213 HOH HOH . N 6 HOH A 26 214 214 HOH HOH . N 6 HOH A 27 215 215 HOH HOH . N 6 HOH A 28 216 216 HOH HOH . N 6 HOH A 29 217 217 HOH HOH . N 6 HOH A 30 218 218 HOH HOH . N 6 HOH A 31 219 219 HOH HOH . O 6 HOH B 1 3 3 HOH HOH . O 6 HOH B 2 4 4 HOH HOH . O 6 HOH B 3 7 7 HOH HOH . O 6 HOH B 4 10 10 HOH HOH . O 6 HOH B 5 12 12 HOH HOH . O 6 HOH B 6 14 14 HOH HOH . O 6 HOH B 7 15 15 HOH HOH . O 6 HOH B 8 16 16 HOH HOH . O 6 HOH B 9 20 20 HOH HOH . O 6 HOH B 10 22 22 HOH HOH . O 6 HOH B 11 23 23 HOH HOH . O 6 HOH B 12 25 25 HOH HOH . O 6 HOH B 13 26 26 HOH HOH . O 6 HOH B 14 28 28 HOH HOH . O 6 HOH B 15 31 31 HOH HOH . O 6 HOH B 16 35 35 HOH HOH . O 6 HOH B 17 37 37 HOH HOH . O 6 HOH B 18 39 39 HOH HOH . O 6 HOH B 19 41 41 HOH HOH . O 6 HOH B 20 44 44 HOH HOH . O 6 HOH B 21 45 45 HOH HOH . O 6 HOH B 22 47 47 HOH HOH . O 6 HOH B 23 48 48 HOH HOH . O 6 HOH B 24 49 49 HOH HOH . O 6 HOH B 25 213 213 HOH HOH . O 6 HOH B 26 214 214 HOH HOH . O 6 HOH B 27 215 215 HOH HOH . O 6 HOH B 28 216 216 HOH HOH . O 6 HOH B 29 217 217 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 833 . . . M 5 -9.831 6.354 6.591 1 45.04 ? C1 833 1 B 1 HETATM 2 C C2 833 . . . M 5 -8.685 5.992 5.839 1 47.11 ? C2 833 1 B 1 HETATM 3 C C3 833 . . . M 5 -8.31 6.687 4.643 1 43.64 ? C3 833 1 B 1 HETATM 4 C C4 833 . . . M 5 -9.067 7.758 4.155 1 38.08 ? C4 833 1 B 1 HETATM 5 C C5 833 . . . M 5 -10.196 8.122 4.876 1 43.46 ? C5 833 1 B 1 HETATM 6 C C6 833 . . . M 5 -10.575 7.421 6.114 1 44.72 ? C6 833 1 B 1 HETATM 7 O O7 833 . . . M 5 -11.738 8.003 6.593 1 46.04 ? O7 833 1 B 1 HETATM 8 C C8 833 . . . M 5 -12.008 9.166 5.778 1 41.55 ? C8 833 1 B 1 HETATM 9 O O9 833 . . . M 5 -11.117 9.111 4.66 1 34.12 ? O9 833 1 B 1 HETATM 10 C C10 833 . . . M 5 -7.861 4.847 6.303 1 48.44 ? C10 833 1 B 1 HETATM 11 C C11 833 . . . M 5 -6.966 4.134 5.485 1 49.77 ? C11 833 1 B 1 HETATM 12 C C12 833 . . . M 5 -6.43 3.154 6.299 1 51.69 ? C12 833 1 B 1 HETATM 13 N N13 833 . . . M 5 -6.948 3.223 7.521 1 53.12 ? N13 833 1 B 1 HETATM 14 N N14 833 . . . M 5 -7.874 4.288 7.553 1 51.57 ? N14 833 1 B 1 HETATM 15 N N15 833 . . . M 5 -5.496 2.218 5.901 1 51.51 ? N15 833 1 B 1 HETATM 16 C C16 833 . . . M 5 -6.757 2.439 8.775 1 53.52 ? C16 833 1 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #