data_3AOU # _model_server_result.job_id h_yV_VKzMnUW--WBhJ8d0Q _model_server_result.datetime_utc '2024-11-24 13:30:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3aou # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":202}' # _entry.id 3AOU # _exptl.entry_id 3AOU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 496.589 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UNDECYL-MALTOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AOU _cell.length_a 120.41 _cell.length_b 124.937 _cell.length_c 208.221 _cell.Z_PDB 40 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AOU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A CD GLU 139 A GLU 139 1_555 K N1 DCW . A DCW 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale2 B CD GLU 139 B GLU 139 1_555 L N1 DCW . B DCW 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale3 C CD GLU 139 C GLU 139 1_555 N N1 DCW . C DCW 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.473 ? covale ? covale4 D CD GLU 139 D GLU 139 1_555 O N1 DCW . D DCW 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale5 E CD GLU 139 E GLU 139 1_555 P N1 DCW . E DCW 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale6 F CD GLU 139 F GLU 139 1_555 R N1 DCW . F DCW 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? covale ? covale7 G CD GLU 139 G GLU 139 1_555 S N1 DCW . G DCW 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.467 ? covale ? covale8 H CD GLU 139 H GLU 139 1_555 T N1 DCW . H DCW 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale9 I CD GLU 139 I GLU 139 1_555 U N1 DCW . I DCW 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.468 ? covale ? covale10 J CD GLU 139 J GLU 139 1_555 V N1 DCW . J DCW 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.476 ? # _chem_comp.formula 'C23 H44 O11' _chem_comp.formula_weight 496.589 _chem_comp.id UMQ _chem_comp.mon_nstd_flag . _chem_comp.name UNDECYL-MALTOSIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms UNDECYL-BETA-D-MALTOPYRANOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 O2 UMQ sing 332 n n C2 C1 UMQ sing 333 n n C2 C3 UMQ sing 334 n n C2 H21 UMQ sing 335 n n C4 C5 UMQ sing 336 n n C4 O4 UMQ sing 337 n n C4 C3 UMQ sing 338 n n C4 H41 UMQ sing 339 n n C5 C6 UMQ sing 340 n n C5 O5 UMQ sing 341 n n C5 H51 UMQ sing 342 n n C6 O6 UMQ sing 343 n n C6 H61 UMQ sing 344 n n C6 H62 UMQ sing 345 n n O2 HO21 UMQ sing 346 n n O4 HO41 UMQ sing 347 n n C1 O1 UMQ sing 348 n n C1 O5 UMQ sing 349 n n C1 H11 UMQ sing 350 n n C3 O3 UMQ sing 351 n n C3 H31 UMQ sing 352 n n O1 C4' UMQ sing 353 n n O3 HO31 UMQ sing 354 n n O6 HO61 UMQ sing 355 n n C1' C2' UMQ sing 356 n n C1' O1' UMQ sing 357 n n C1' O5' UMQ sing 358 n n C1' "H1'1" UMQ sing 359 n n C2' C3' UMQ sing 360 n n C2' O2' UMQ sing 361 n n C2' "H2'1" UMQ sing 362 n n C3' C4' UMQ sing 363 n n C3' O3' UMQ sing 364 n n C3' "H3'1" UMQ sing 365 n n C4' C5' UMQ sing 366 n n C4' "H4'1" UMQ sing 367 n n C5' C6' UMQ sing 368 n n C5' O5' UMQ sing 369 n n C5' "H5'1" UMQ sing 370 n n C6' O6' UMQ sing 371 n n C6' "H6'1" UMQ sing 372 n n C6' "H6'2" UMQ sing 373 n n O1' CA UMQ sing 374 n n O3' HO3' UMQ sing 375 n n O6' HO6' UMQ sing 376 n n O2' HO2' UMQ sing 377 n n CA CB UMQ sing 378 n n CA HA1 UMQ sing 379 n n CA HA2 UMQ sing 380 n n CB CC UMQ sing 381 n n CB HB1 UMQ sing 382 n n CB HB2 UMQ sing 383 n n CC CD UMQ sing 384 n n CC HC1 UMQ sing 385 n n CC HC2 UMQ sing 386 n n CD CF UMQ sing 387 n n CD HD1 UMQ sing 388 n n CD HD2 UMQ sing 389 n n CF CG UMQ sing 390 n n CF HF1 UMQ sing 391 n n CF HF2 UMQ sing 392 n n CG CH UMQ sing 393 n n CG HG1 UMQ sing 394 n n CG HG2 UMQ sing 395 n n CH CI UMQ sing 396 n n CH HH1 UMQ sing 397 n n CH HH2 UMQ sing 398 n n CI CJ UMQ sing 399 n n CI HI1 UMQ sing 400 n n CI HI2 UMQ sing 401 n n CJ CK UMQ sing 402 n n CJ HJ1 UMQ sing 403 n n CJ HJ2 UMQ sing 404 n n CK CL UMQ sing 405 n n CK HK1 UMQ sing 406 n n CK HK2 UMQ sing 407 n n CL HL1 UMQ sing 408 n n CL HL2 UMQ sing 409 n n CL HL3 UMQ sing 410 n n # _atom_sites.entry_id 3AOU _atom_sites.fract_transf_matrix[1][1] 0.008305 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008004 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004803 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 DCW A 1 201 139 DCW GLH . L 2 DCW B 1 201 139 DCW GLH . M 3 UMQ C 1 202 1001 UMQ UMQ . N 2 DCW C 1 201 139 DCW GLH . O 2 DCW D 1 201 139 DCW GLH . P 2 DCW E 1 201 139 DCW GLH . Q 3 UMQ F 1 202 1002 UMQ UMQ . R 2 DCW F 1 201 139 DCW GLH . S 2 DCW G 1 201 139 DCW GLH . T 2 DCW H 1 201 139 DCW GLH . U 2 DCW I 1 201 139 DCW GLH . V 2 DCW J 1 201 139 DCW GLH . W 4 HOH G 1 301 2003 HOH HOH . X 4 HOH H 1 301 2005 HOH HOH . Y 4 HOH I 1 301 2007 HOH HOH . Y 4 HOH I 2 302 2008 HOH HOH . Z 4 HOH J 1 301 2009 HOH HOH . Z 4 HOH J 2 302 2010 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 UMQ . . . Q 3 3.574 -9.105 46.065 1 128.55 ? C2 UMQ 202 F 1 HETATM 2 C C4 UMQ . . . Q 3 2.045 -7.075 45.971 1 126.14 ? C4 UMQ 202 F 1 HETATM 3 C C5 UMQ . . . Q 3 3.012 -6.397 46.932 1 124.65 ? C5 UMQ 202 F 1 HETATM 4 C C6 UMQ . . . Q 3 2.238 -5.52 47.898 1 124.07 ? C6 UMQ 202 F 1 HETATM 5 O O2 UMQ . . . Q 3 4.371 -9.901 45.191 1 130.56 ? O2 UMQ 202 F 1 HETATM 6 O O4 UMQ . . . Q 3 1.53 -6.098 45.059 1 125.29 ? O4 UMQ 202 F 1 HETATM 7 C C1 UMQ . . . Q 3 4.504 -8.329 46.993 1 128.01 ? C1 UMQ 202 F 1 HETATM 8 C C3 UMQ . . . Q 3 2.716 -8.2 45.187 1 127.09 ? C3 UMQ 202 F 1 HETATM 9 O O1 UMQ . . . Q 3 5.569 -7.722 46.248 1 129.28 ? O1 UMQ 202 F 1 HETATM 10 O O3 UMQ . . . Q 3 1.726 -9.005 44.54 1 126.89 ? O3 UMQ 202 F 1 HETATM 11 O O5 UMQ . . . Q 3 3.746 -7.347 47.709 1 126.18 ? O5 UMQ 202 F 1 HETATM 12 O O6 UMQ . . . Q 3 2.883 -4.251 47.9 1 122.55 ? O6 UMQ 202 F 1 HETATM 13 C C1' UMQ . . . Q 3 9.708 -6.844 46.695 1 130.78 ? C1' UMQ 202 F 1 HETATM 14 C C2' UMQ . . . Q 3 9.284 -8.295 46.474 1 132 ? C2' UMQ 202 F 1 HETATM 15 C C3' UMQ . . . Q 3 7.874 -8.355 45.892 1 132.28 ? C3' UMQ 202 F 1 HETATM 16 C C4' UMQ . . . Q 3 6.866 -7.765 46.872 1 131.9 ? C4' UMQ 202 F 1 HETATM 17 C C5' UMQ . . . Q 3 7.314 -6.35 47.285 1 132.32 ? C5' UMQ 202 F 1 HETATM 18 C C6' UMQ . . . Q 3 6.638 -5.966 48.606 1 134.81 ? C6' UMQ 202 F 1 HETATM 19 O O1' UMQ . . . Q 3 10.957 -6.848 47.402 1 130.67 ? O1' UMQ 202 F 1 HETATM 20 O O3' UMQ . . . Q 3 7.519 -9.699 45.541 1 133.93 ? O3' UMQ 202 F 1 HETATM 21 O O5' UMQ . . . Q 3 8.731 -6.135 47.471 1 131.03 ? O5' UMQ 202 F 1 HETATM 22 O O6' UMQ . . . Q 3 5.589 -5.019 48.328 1 136.2 ? O6' UMQ 202 F 1 HETATM 23 O O2' UMQ . . . Q 3 10.198 -8.929 45.573 1 132.55 ? O2' UMQ 202 F 1 HETATM 24 C CA UMQ . . . Q 3 11.811 -5.724 47.162 1 129.45 ? CA UMQ 202 F 1 HETATM 25 C CB UMQ . . . Q 3 13.086 -5.839 48.003 1 129.52 ? CB UMQ 202 F 1 HETATM 26 C CC UMQ . . . Q 3 14.284 -6.287 47.164 1 129.92 ? CC UMQ 202 F 1 HETATM 27 C CD UMQ . . . Q 3 15.47 -6.725 48.025 1 131.04 ? CD UMQ 202 F 1 HETATM 28 C CF UMQ . . . Q 3 16.791 -6.64 47.262 1 131.21 ? CF UMQ 202 F 1 HETATM 29 C CG UMQ . . . Q 3 17.988 -6.579 48.213 1 132.36 ? CG UMQ 202 F 1 HETATM 30 C CH UMQ . . . Q 3 18.813 -5.304 48.031 1 131.56 ? CH UMQ 202 F 1 HETATM 31 C CI UMQ . . . Q 3 19.491 -4.857 49.332 1 133.02 ? CI UMQ 202 F 1 HETATM 32 C CJ UMQ . . . Q 3 20.291 -3.555 49.163 1 132.41 ? CJ UMQ 202 F 1 HETATM 33 C CK UMQ . . . Q 3 20.742 -2.926 50.491 1 132.42 ? CK UMQ 202 F 1 HETATM 34 C CL UMQ . . . Q 3 21.653 -1.73 50.271 1 130.97 ? CL UMQ 202 F 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 34 #