data_3AP9 # _model_server_result.job_id DYKVo93iq16TxdvwjW6z-Q _model_server_result.datetime_utc '2024-11-29 16:57:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ap9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":161}' # _entry.id 3AP9 # _exptl.entry_id 3AP9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AP9 _cell.length_a 46.419 _cell.length_b 49.952 _cell.length_c 70.207 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AP9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 GAL BGC C1 O1 . O4 HO4 . sing 2 ? 2 3 2 NAG GAL C1 O1 . O3 HO3 . sing 3 ? 2 4 3 FUC NAG C1 O1 . O3 HO3 . sing 4 ? 2 5 3 GAL NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B BGC 1 B 1 BGC A 159 BGC 2 n B GAL 2 B 2 GAL A 158 GAL 2 n B NAG 3 B 3 NAG A 157 NAG 2 n B FUC 4 B 4 FUC A 156 FUC 2 n B GAL 5 B 5 GAL A 155 GAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O4 BGC . B BGC 1 1_555 B C1 GAL . B GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.418 ? covale ? covale2 B O3 GAL . B GAL 2 1_555 B C1 NAG . B NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.414 ? covale ? covale3 B O3 NAG . B NAG 3 1_555 B C1 FUC . B FUC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale4 B O4 NAG . B NAG 3 1_555 B C1 GAL . B GAL 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.42 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3AP9 _atom_sites.fract_transf_matrix[1][1] 0.021543 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020019 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014244 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MPD A 1 160 160 MPD MPD . D 4 CL A 1 161 161 CL CL . E 4 CL A 1 162 162 CL CL . F 4 CL A 1 163 163 CL CL . G 5 HOH A 1 164 164 HOH HOH . G 5 HOH A 2 165 165 HOH HOH . G 5 HOH A 3 166 166 HOH HOH . G 5 HOH A 4 167 167 HOH HOH . G 5 HOH A 5 168 168 HOH HOH . G 5 HOH A 6 169 169 HOH HOH . G 5 HOH A 7 170 170 HOH HOH . G 5 HOH A 8 171 171 HOH HOH . G 5 HOH A 9 172 172 HOH HOH . G 5 HOH A 10 173 173 HOH HOH . G 5 HOH A 11 174 174 HOH HOH . G 5 HOH A 12 175 175 HOH HOH . G 5 HOH A 13 176 176 HOH HOH . G 5 HOH A 14 177 177 HOH HOH . G 5 HOH A 15 178 178 HOH HOH . G 5 HOH A 16 179 179 HOH HOH . G 5 HOH A 17 180 180 HOH HOH . G 5 HOH A 18 181 181 HOH HOH . G 5 HOH A 19 182 182 HOH HOH . G 5 HOH A 20 183 183 HOH HOH . G 5 HOH A 21 184 184 HOH HOH . G 5 HOH A 22 185 185 HOH HOH . G 5 HOH A 23 186 186 HOH HOH . G 5 HOH A 24 187 187 HOH HOH . G 5 HOH A 25 188 188 HOH HOH . G 5 HOH A 26 189 189 HOH HOH . G 5 HOH A 27 190 190 HOH HOH . G 5 HOH A 28 191 191 HOH HOH . G 5 HOH A 29 192 192 HOH HOH . G 5 HOH A 30 193 193 HOH HOH . G 5 HOH A 31 194 194 HOH HOH . G 5 HOH A 32 195 195 HOH HOH . G 5 HOH A 33 196 196 HOH HOH . G 5 HOH A 34 197 197 HOH HOH . G 5 HOH A 35 198 198 HOH HOH . G 5 HOH A 36 199 199 HOH HOH . G 5 HOH A 37 200 200 HOH HOH . G 5 HOH A 38 201 201 HOH HOH . G 5 HOH A 39 202 202 HOH HOH . G 5 HOH A 40 203 203 HOH HOH . G 5 HOH A 41 204 204 HOH HOH . G 5 HOH A 42 205 205 HOH HOH . G 5 HOH A 43 206 206 HOH HOH . G 5 HOH A 44 207 207 HOH HOH . G 5 HOH A 45 208 208 HOH HOH . G 5 HOH A 46 209 209 HOH HOH . G 5 HOH A 47 210 210 HOH HOH . G 5 HOH A 48 211 211 HOH HOH . G 5 HOH A 49 212 212 HOH HOH . G 5 HOH A 50 213 213 HOH HOH . G 5 HOH A 51 214 214 HOH HOH . G 5 HOH A 52 215 215 HOH HOH . G 5 HOH A 53 216 216 HOH HOH . G 5 HOH A 54 217 217 HOH HOH . G 5 HOH A 55 218 218 HOH HOH . G 5 HOH A 56 219 219 HOH HOH . G 5 HOH A 57 220 220 HOH HOH . G 5 HOH A 58 221 221 HOH HOH . G 5 HOH A 59 222 222 HOH HOH . G 5 HOH A 60 223 223 HOH HOH . G 5 HOH A 61 224 224 HOH HOH . G 5 HOH A 62 225 225 HOH HOH . G 5 HOH A 63 226 226 HOH HOH . G 5 HOH A 64 227 227 HOH HOH . G 5 HOH A 65 228 228 HOH HOH . G 5 HOH A 66 229 229 HOH HOH . G 5 HOH A 67 230 230 HOH HOH . G 5 HOH A 68 231 231 HOH HOH . G 5 HOH A 69 232 232 HOH HOH . G 5 HOH A 70 234 234 HOH HOH . G 5 HOH A 71 236 236 HOH HOH . G 5 HOH A 72 237 237 HOH HOH . G 5 HOH A 73 242 242 HOH HOH . G 5 HOH A 74 244 244 HOH HOH . G 5 HOH A 75 246 246 HOH HOH . G 5 HOH A 76 247 247 HOH HOH . G 5 HOH A 77 248 248 HOH HOH . G 5 HOH A 78 250 250 HOH HOH . G 5 HOH A 79 251 251 HOH HOH . G 5 HOH A 80 252 252 HOH HOH . G 5 HOH A 81 256 256 HOH HOH . G 5 HOH A 82 257 257 HOH HOH . G 5 HOH A 83 258 258 HOH HOH . G 5 HOH A 84 262 262 HOH HOH . G 5 HOH A 85 265 265 HOH HOH . G 5 HOH A 86 279 279 HOH HOH . G 5 HOH A 87 286 286 HOH HOH . G 5 HOH A 88 287 287 HOH HOH . G 5 HOH A 89 288 288 HOH HOH . G 5 HOH A 90 289 289 HOH HOH . G 5 HOH A 91 290 290 HOH HOH . G 5 HOH A 92 291 291 HOH HOH . G 5 HOH A 93 292 292 HOH HOH . G 5 HOH A 94 293 293 HOH HOH . G 5 HOH A 95 294 294 HOH HOH . G 5 HOH A 96 295 295 HOH HOH . G 5 HOH A 97 296 296 HOH HOH . G 5 HOH A 98 297 297 HOH HOH . G 5 HOH A 99 298 298 HOH HOH . G 5 HOH A 100 299 299 HOH HOH . G 5 HOH A 101 300 300 HOH HOH . G 5 HOH A 102 301 301 HOH HOH . G 5 HOH A 103 302 302 HOH HOH . G 5 HOH A 104 303 303 HOH HOH . G 5 HOH A 105 304 304 HOH HOH . G 5 HOH A 106 305 305 HOH HOH . G 5 HOH A 107 306 306 HOH HOH . G 5 HOH A 108 307 307 HOH HOH . G 5 HOH A 109 308 308 HOH HOH . G 5 HOH A 110 309 309 HOH HOH . G 5 HOH A 111 310 310 HOH HOH . G 5 HOH A 112 311 311 HOH HOH . G 5 HOH A 113 312 312 HOH HOH . G 5 HOH A 114 313 313 HOH HOH . G 5 HOH A 115 314 314 HOH HOH . G 5 HOH A 116 315 315 HOH HOH . G 5 HOH A 117 316 316 HOH HOH . G 5 HOH A 118 317 317 HOH HOH . G 5 HOH A 119 318 318 HOH HOH . G 5 HOH A 120 319 319 HOH HOH . G 5 HOH A 121 320 320 HOH HOH . G 5 HOH A 122 321 321 HOH HOH . G 5 HOH A 123 322 322 HOH HOH . G 5 HOH A 124 323 323 HOH HOH . G 5 HOH A 125 324 324 HOH HOH . G 5 HOH A 126 325 325 HOH HOH . G 5 HOH A 127 326 326 HOH HOH . G 5 HOH A 128 327 327 HOH HOH . G 5 HOH A 129 328 328 HOH HOH . G 5 HOH A 130 329 329 HOH HOH . G 5 HOH A 131 330 330 HOH HOH . G 5 HOH A 132 331 331 HOH HOH . G 5 HOH A 133 332 332 HOH HOH . G 5 HOH A 134 333 333 HOH HOH . G 5 HOH A 135 334 334 HOH HOH . G 5 HOH A 136 335 335 HOH HOH . G 5 HOH A 137 336 336 HOH HOH . G 5 HOH A 138 337 337 HOH HOH . G 5 HOH A 139 338 338 HOH HOH . G 5 HOH A 140 339 339 HOH HOH . G 5 HOH A 141 340 340 HOH HOH . G 5 HOH A 142 341 341 HOH HOH . G 5 HOH A 143 342 342 HOH HOH . G 5 HOH A 144 343 343 HOH HOH . G 5 HOH A 145 344 344 HOH HOH . G 5 HOH A 146 345 345 HOH HOH . G 5 HOH A 147 346 346 HOH HOH . G 5 HOH A 148 347 347 HOH HOH . G 5 HOH A 149 348 348 HOH HOH . G 5 HOH A 150 349 349 HOH HOH . G 5 HOH A 151 350 350 HOH HOH . G 5 HOH A 152 351 351 HOH HOH . G 5 HOH A 153 352 352 HOH HOH . G 5 HOH A 154 353 353 HOH HOH . G 5 HOH A 155 354 354 HOH HOH . G 5 HOH A 156 355 355 HOH HOH . G 5 HOH A 157 356 356 HOH HOH . G 5 HOH A 158 357 357 HOH HOH . G 5 HOH A 159 358 358 HOH HOH . G 5 HOH A 160 359 359 HOH HOH . G 5 HOH A 161 360 360 HOH HOH . G 5 HOH A 162 361 361 HOH HOH . G 5 HOH A 163 362 362 HOH HOH . G 5 HOH A 164 363 363 HOH HOH . G 5 HOH A 165 364 364 HOH HOH . G 5 HOH A 166 365 365 HOH HOH . G 5 HOH A 167 366 366 HOH HOH . G 5 HOH A 168 367 367 HOH HOH . G 5 HOH A 169 368 368 HOH HOH . G 5 HOH A 170 369 369 HOH HOH . G 5 HOH A 171 370 370 HOH HOH . G 5 HOH A 172 371 371 HOH HOH . G 5 HOH A 173 372 372 HOH HOH . G 5 HOH A 174 373 373 HOH HOH . G 5 HOH A 175 374 374 HOH HOH . G 5 HOH A 176 375 375 HOH HOH . G 5 HOH A 177 376 376 HOH HOH . G 5 HOH A 178 377 377 HOH HOH . G 5 HOH A 179 378 378 HOH HOH . G 5 HOH A 180 379 379 HOH HOH . G 5 HOH A 181 380 380 HOH HOH . G 5 HOH A 182 381 381 HOH HOH . G 5 HOH A 183 382 382 HOH HOH . G 5 HOH A 184 383 383 HOH HOH . G 5 HOH A 185 384 384 HOH HOH . G 5 HOH A 186 385 385 HOH HOH . G 5 HOH A 187 386 386 HOH HOH . G 5 HOH A 188 387 387 HOH HOH . G 5 HOH A 189 388 388 HOH HOH . G 5 HOH A 190 389 389 HOH HOH . G 5 HOH A 191 390 390 HOH HOH . G 5 HOH A 192 391 391 HOH HOH . G 5 HOH A 193 392 392 HOH HOH . G 5 HOH A 194 393 393 HOH HOH . G 5 HOH A 195 394 394 HOH HOH . G 5 HOH A 196 395 395 HOH HOH . G 5 HOH A 197 396 396 HOH HOH . G 5 HOH A 198 397 397 HOH HOH . G 5 HOH A 199 398 398 HOH HOH . G 5 HOH A 200 399 399 HOH HOH . G 5 HOH A 201 400 400 HOH HOH . G 5 HOH A 202 401 401 HOH HOH . G 5 HOH A 203 402 402 HOH HOH . G 5 HOH A 204 403 403 HOH HOH . G 5 HOH A 205 404 404 HOH HOH . G 5 HOH A 206 405 405 HOH HOH . G 5 HOH A 207 406 406 HOH HOH . G 5 HOH A 208 407 407 HOH HOH . G 5 HOH A 209 408 408 HOH HOH . G 5 HOH A 210 409 409 HOH HOH . G 5 HOH A 211 410 410 HOH HOH . G 5 HOH A 212 411 411 HOH HOH . G 5 HOH A 213 412 412 HOH HOH . G 5 HOH A 214 413 413 HOH HOH . G 5 HOH A 215 414 414 HOH HOH . G 5 HOH A 216 415 415 HOH HOH . G 5 HOH A 217 416 416 HOH HOH . G 5 HOH A 218 417 417 HOH HOH . G 5 HOH A 219 418 418 HOH HOH . G 5 HOH A 220 419 419 HOH HOH . G 5 HOH A 221 420 420 HOH HOH . G 5 HOH A 222 421 421 HOH HOH . G 5 HOH A 223 422 422 HOH HOH . G 5 HOH A 224 423 423 HOH HOH . G 5 HOH A 225 424 424 HOH HOH . G 5 HOH A 226 425 425 HOH HOH . G 5 HOH A 227 426 426 HOH HOH . G 5 HOH A 228 427 427 HOH HOH . G 5 HOH A 229 428 428 HOH HOH . G 5 HOH A 230 429 429 HOH HOH . G 5 HOH A 231 430 430 HOH HOH . G 5 HOH A 232 431 431 HOH HOH . G 5 HOH A 233 432 432 HOH HOH . G 5 HOH A 234 433 433 HOH HOH . G 5 HOH A 235 434 434 HOH HOH . G 5 HOH A 236 435 435 HOH HOH . G 5 HOH A 237 436 436 HOH HOH . G 5 HOH A 238 437 437 HOH HOH . G 5 HOH A 239 438 438 HOH HOH . G 5 HOH A 240 439 439 HOH HOH . G 5 HOH A 241 440 440 HOH HOH . G 5 HOH A 242 441 441 HOH HOH . G 5 HOH A 243 442 442 HOH HOH . G 5 HOH A 244 443 443 HOH HOH . G 5 HOH A 245 444 444 HOH HOH . G 5 HOH A 246 445 445 HOH HOH . G 5 HOH A 247 446 446 HOH HOH . G 5 HOH A 248 447 447 HOH HOH . G 5 HOH A 249 448 448 HOH HOH . G 5 HOH A 250 449 449 HOH HOH . G 5 HOH A 251 450 450 HOH HOH . G 5 HOH A 252 451 451 HOH HOH . G 5 HOH A 253 452 452 HOH HOH . G 5 HOH A 254 453 453 HOH HOH . G 5 HOH A 255 454 454 HOH HOH . G 5 HOH A 256 455 455 HOH HOH . G 5 HOH A 257 456 456 HOH HOH . G 5 HOH A 258 457 457 HOH HOH . G 5 HOH A 259 458 458 HOH HOH . G 5 HOH A 260 459 459 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 23.856 _atom_site.Cartn_y 22.673 _atom_site.Cartn_z 43.185 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 161 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 405 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #