data_3APA # _model_server_result.job_id UW3KUL1lGrRBJo0SXciQVA _model_server_result.datetime_utc '2024-12-26 15:25:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3apa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3APA # _exptl.entry_id 3APA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3APA _cell.length_a 58.88 _cell.length_b 73.217 _cell.length_c 30.096 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3APA _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 3APA _atom_sites.fract_transf_matrix[1][1] 0.016983 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013658 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.033227 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 1 1 GOL GOL . C 3 CL A 1 160 1 CL CL . D 4 HOH A 1 2 2 HOH HOH . D 4 HOH A 2 3 3 HOH HOH . D 4 HOH A 3 4 4 HOH HOH . D 4 HOH A 4 5 5 HOH HOH . D 4 HOH A 5 6 6 HOH HOH . D 4 HOH A 6 7 7 HOH HOH . D 4 HOH A 7 8 8 HOH HOH . D 4 HOH A 8 9 9 HOH HOH . D 4 HOH A 9 10 10 HOH HOH . D 4 HOH A 10 11 11 HOH HOH . D 4 HOH A 11 12 12 HOH HOH . D 4 HOH A 12 13 13 HOH HOH . D 4 HOH A 13 14 14 HOH HOH . D 4 HOH A 14 15 15 HOH HOH . D 4 HOH A 15 16 16 HOH HOH . D 4 HOH A 16 17 17 HOH HOH . D 4 HOH A 17 18 18 HOH HOH . D 4 HOH A 18 161 1 HOH HOH . D 4 HOH A 19 162 19 HOH HOH . D 4 HOH A 20 163 20 HOH HOH . D 4 HOH A 21 164 21 HOH HOH . D 4 HOH A 22 165 22 HOH HOH . D 4 HOH A 23 166 23 HOH HOH . D 4 HOH A 24 167 24 HOH HOH . D 4 HOH A 25 168 25 HOH HOH . D 4 HOH A 26 169 26 HOH HOH . D 4 HOH A 27 170 27 HOH HOH . D 4 HOH A 28 171 28 HOH HOH . D 4 HOH A 29 172 29 HOH HOH . D 4 HOH A 30 173 30 HOH HOH . D 4 HOH A 31 174 31 HOH HOH . D 4 HOH A 32 175 32 HOH HOH . D 4 HOH A 33 176 33 HOH HOH . D 4 HOH A 34 177 34 HOH HOH . D 4 HOH A 35 178 35 HOH HOH . D 4 HOH A 36 179 36 HOH HOH . D 4 HOH A 37 180 37 HOH HOH . D 4 HOH A 38 181 38 HOH HOH . D 4 HOH A 39 182 39 HOH HOH . D 4 HOH A 40 183 40 HOH HOH . D 4 HOH A 41 184 41 HOH HOH . D 4 HOH A 42 185 42 HOH HOH . D 4 HOH A 43 186 43 HOH HOH . D 4 HOH A 44 187 44 HOH HOH . D 4 HOH A 45 188 45 HOH HOH . D 4 HOH A 46 189 46 HOH HOH . D 4 HOH A 47 190 47 HOH HOH . D 4 HOH A 48 191 48 HOH HOH . D 4 HOH A 49 192 49 HOH HOH . D 4 HOH A 50 193 50 HOH HOH . D 4 HOH A 51 194 51 HOH HOH . D 4 HOH A 52 195 52 HOH HOH . D 4 HOH A 53 196 53 HOH HOH . D 4 HOH A 54 197 54 HOH HOH . D 4 HOH A 55 198 55 HOH HOH . D 4 HOH A 56 199 56 HOH HOH . D 4 HOH A 57 200 57 HOH HOH . D 4 HOH A 58 201 58 HOH HOH . D 4 HOH A 59 202 59 HOH HOH . D 4 HOH A 60 203 60 HOH HOH . D 4 HOH A 61 204 61 HOH HOH . D 4 HOH A 62 205 62 HOH HOH . D 4 HOH A 63 206 63 HOH HOH . D 4 HOH A 64 207 64 HOH HOH . D 4 HOH A 65 208 65 HOH HOH . D 4 HOH A 66 209 66 HOH HOH . D 4 HOH A 67 210 67 HOH HOH . D 4 HOH A 68 211 68 HOH HOH . D 4 HOH A 69 212 69 HOH HOH . D 4 HOH A 70 213 70 HOH HOH . D 4 HOH A 71 214 71 HOH HOH . D 4 HOH A 72 215 72 HOH HOH . D 4 HOH A 73 216 73 HOH HOH . D 4 HOH A 74 217 74 HOH HOH . D 4 HOH A 75 218 75 HOH HOH . D 4 HOH A 76 219 76 HOH HOH . D 4 HOH A 77 220 77 HOH HOH . D 4 HOH A 78 221 78 HOH HOH . D 4 HOH A 79 222 79 HOH HOH . D 4 HOH A 80 223 80 HOH HOH . D 4 HOH A 81 224 81 HOH HOH . D 4 HOH A 82 225 82 HOH HOH . D 4 HOH A 83 226 83 HOH HOH . D 4 HOH A 84 227 84 HOH HOH . D 4 HOH A 85 228 85 HOH HOH . D 4 HOH A 86 229 86 HOH HOH . D 4 HOH A 87 230 87 HOH HOH . D 4 HOH A 88 231 88 HOH HOH . D 4 HOH A 89 232 89 HOH HOH . D 4 HOH A 90 233 90 HOH HOH . D 4 HOH A 91 234 91 HOH HOH . D 4 HOH A 92 235 92 HOH HOH . D 4 HOH A 93 236 93 HOH HOH . D 4 HOH A 94 237 94 HOH HOH . D 4 HOH A 95 238 95 HOH HOH . D 4 HOH A 96 239 96 HOH HOH . D 4 HOH A 97 240 97 HOH HOH . D 4 HOH A 98 241 98 HOH HOH . D 4 HOH A 99 242 99 HOH HOH . D 4 HOH A 100 243 100 HOH HOH . D 4 HOH A 101 244 101 HOH HOH . D 4 HOH A 102 245 102 HOH HOH . D 4 HOH A 103 246 103 HOH HOH . D 4 HOH A 104 247 104 HOH HOH . D 4 HOH A 105 248 105 HOH HOH . D 4 HOH A 106 249 106 HOH HOH . D 4 HOH A 107 250 107 HOH HOH . D 4 HOH A 108 251 108 HOH HOH . D 4 HOH A 109 252 109 HOH HOH . D 4 HOH A 110 253 110 HOH HOH . D 4 HOH A 111 254 111 HOH HOH . D 4 HOH A 112 255 112 HOH HOH . D 4 HOH A 113 256 113 HOH HOH . D 4 HOH A 114 257 114 HOH HOH . D 4 HOH A 115 258 115 HOH HOH . D 4 HOH A 116 259 116 HOH HOH . D 4 HOH A 117 260 117 HOH HOH . D 4 HOH A 118 261 118 HOH HOH . D 4 HOH A 119 262 119 HOH HOH . D 4 HOH A 120 263 120 HOH HOH . D 4 HOH A 121 264 121 HOH HOH . D 4 HOH A 122 265 122 HOH HOH . D 4 HOH A 123 266 123 HOH HOH . D 4 HOH A 124 267 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 19.047 3.42 22.581 1 23.08 ? C1 GOL 1 A 1 HETATM 2 O O1 GOL . . . B 2 19.16 4.811 22.734 1 18.47 ? O1 GOL 1 A 1 HETATM 3 C C2 GOL . . . B 2 19.748 2.719 23.743 1 23.35 ? C2 GOL 1 A 1 HETATM 4 O O2 GOL . . . B 2 21.127 3.023 23.698 1 24.05 ? O2 GOL 1 A 1 HETATM 5 C C3 GOL . . . B 2 19.2 3.289 25.06 1 23.32 ? C3 GOL 1 A 1 HETATM 6 O O3 GOL . . . B 2 17.859 2.877 25.263 1 25.93 ? O3 GOL 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #