data_3APU # _model_server_result.job_id Lxxhh_uc2F91N1OVPr0ivw _model_server_result.datetime_utc '2024-11-22 00:36:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3apu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":190}' # _entry.id 3APU # _exptl.entry_id 3APU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.88 _cell.angle_gamma 90 _cell.entry_id 3APU _cell.length_a 67.107 _cell.length_b 44.862 _cell.length_c 120.784 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3APU _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 5 1_555 A SG CYS 148 A CYS 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf2 A SG CYS 73 A CYS 72 1_555 A SG CYS 166 A CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 B SG CYS 6 B CYS 5 1_555 B SG CYS 148 B CYS 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 B SG CYS 73 B CYS 72 1_555 B SG CYS 166 B CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 237 n n O1 HO1 PG4 sing 238 n n C1 C2 PG4 sing 239 n n C1 H11 PG4 sing 240 n n C1 H12 PG4 sing 241 n n C2 O2 PG4 sing 242 n n C2 H21 PG4 sing 243 n n C2 H22 PG4 sing 244 n n O2 C3 PG4 sing 245 n n C3 C4 PG4 sing 246 n n C3 H31 PG4 sing 247 n n C3 H32 PG4 sing 248 n n C4 O3 PG4 sing 249 n n C4 H41 PG4 sing 250 n n C4 H42 PG4 sing 251 n n O3 C5 PG4 sing 252 n n C5 C6 PG4 sing 253 n n C5 H51 PG4 sing 254 n n C5 H52 PG4 sing 255 n n C6 O4 PG4 sing 256 n n C6 H61 PG4 sing 257 n n C6 H62 PG4 sing 258 n n O4 C7 PG4 sing 259 n n C7 C8 PG4 sing 260 n n C7 H71 PG4 sing 261 n n C7 H72 PG4 sing 262 n n C8 O5 PG4 sing 263 n n C8 H81 PG4 sing 264 n n C8 H82 PG4 sing 265 n n O5 HO5 PG4 sing 266 n n # _atom_sites.entry_id 3APU _atom_sites.fract_transf_matrix[1][1] 0.014902 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000489 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022291 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008284 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PG4 A 1 190 1 PG4 PG4 . D 2 PG4 B 1 190 2 PG4 PG4 . E 3 HOH A 1 191 1 HOH HOH . E 3 HOH A 2 192 2 HOH HOH . E 3 HOH A 3 193 3 HOH HOH . E 3 HOH A 4 194 4 HOH HOH . E 3 HOH A 5 195 5 HOH HOH . E 3 HOH A 6 196 6 HOH HOH . E 3 HOH A 7 197 8 HOH HOH . E 3 HOH A 8 198 9 HOH HOH . E 3 HOH A 9 199 11 HOH HOH . E 3 HOH A 10 200 13 HOH HOH . E 3 HOH A 11 201 14 HOH HOH . E 3 HOH A 12 202 15 HOH HOH . E 3 HOH A 13 203 16 HOH HOH . E 3 HOH A 14 204 17 HOH HOH . E 3 HOH A 15 205 18 HOH HOH . E 3 HOH A 16 206 19 HOH HOH . E 3 HOH A 17 207 21 HOH HOH . E 3 HOH A 18 208 22 HOH HOH . E 3 HOH A 19 209 24 HOH HOH . E 3 HOH A 20 210 25 HOH HOH . E 3 HOH A 21 211 27 HOH HOH . E 3 HOH A 22 212 28 HOH HOH . E 3 HOH A 23 213 29 HOH HOH . E 3 HOH A 24 214 31 HOH HOH . E 3 HOH A 25 215 32 HOH HOH . E 3 HOH A 26 216 33 HOH HOH . E 3 HOH A 27 217 34 HOH HOH . E 3 HOH A 28 218 36 HOH HOH . E 3 HOH A 29 219 37 HOH HOH . E 3 HOH A 30 220 39 HOH HOH . E 3 HOH A 31 221 41 HOH HOH . E 3 HOH A 32 222 51 HOH HOH . E 3 HOH A 33 223 52 HOH HOH . E 3 HOH A 34 224 53 HOH HOH . E 3 HOH A 35 225 55 HOH HOH . E 3 HOH A 36 226 56 HOH HOH . E 3 HOH A 37 227 57 HOH HOH . E 3 HOH A 38 228 60 HOH HOH . E 3 HOH A 39 229 61 HOH HOH . E 3 HOH A 40 230 66 HOH HOH . E 3 HOH A 41 231 67 HOH HOH . E 3 HOH A 42 232 68 HOH HOH . E 3 HOH A 43 233 69 HOH HOH . E 3 HOH A 44 234 70 HOH HOH . E 3 HOH A 45 235 72 HOH HOH . E 3 HOH A 46 236 101 HOH HOH . E 3 HOH A 47 237 102 HOH HOH . E 3 HOH A 48 238 103 HOH HOH . E 3 HOH A 49 239 104 HOH HOH . E 3 HOH A 50 240 107 HOH HOH . E 3 HOH A 51 241 108 HOH HOH . E 3 HOH A 52 242 109 HOH HOH . E 3 HOH A 53 243 113 HOH HOH . E 3 HOH A 54 244 116 HOH HOH . E 3 HOH A 55 245 121 HOH HOH . E 3 HOH A 56 246 122 HOH HOH . E 3 HOH A 57 247 124 HOH HOH . E 3 HOH A 58 248 126 HOH HOH . E 3 HOH A 59 249 127 HOH HOH . F 3 HOH B 1 191 7 HOH HOH . F 3 HOH B 2 192 10 HOH HOH . F 3 HOH B 3 193 12 HOH HOH . F 3 HOH B 4 194 20 HOH HOH . F 3 HOH B 5 195 23 HOH HOH . F 3 HOH B 6 196 26 HOH HOH . F 3 HOH B 7 197 40 HOH HOH . F 3 HOH B 8 198 75 HOH HOH . F 3 HOH B 9 199 78 HOH HOH . F 3 HOH B 10 200 82 HOH HOH . F 3 HOH B 11 201 83 HOH HOH . F 3 HOH B 12 202 84 HOH HOH . F 3 HOH B 13 203 85 HOH HOH . F 3 HOH B 14 204 87 HOH HOH . F 3 HOH B 15 205 91 HOH HOH . F 3 HOH B 16 206 92 HOH HOH . F 3 HOH B 17 207 105 HOH HOH . F 3 HOH B 18 208 106 HOH HOH . F 3 HOH B 19 209 110 HOH HOH . F 3 HOH B 20 210 111 HOH HOH . F 3 HOH B 21 211 112 HOH HOH . F 3 HOH B 22 212 114 HOH HOH . F 3 HOH B 23 213 123 HOH HOH . F 3 HOH B 24 214 130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . C 2 16.862 -0.706 18.072 1 43 ? O1 PG4 190 A 1 HETATM 2 C C1 PG4 . . . C 2 15.933 -1.081 17.031 1 40.73 ? C1 PG4 190 A 1 HETATM 3 C C2 PG4 . . . C 2 15.016 -2.253 17.391 1 39.46 ? C2 PG4 190 A 1 HETATM 4 O O2 PG4 . . . C 2 14.2 -2.041 18.542 1 41.67 ? O2 PG4 190 A 1 HETATM 5 C C3 PG4 . . . C 2 12.835 -2.517 18.394 1 40.6 ? C3 PG4 190 A 1 HETATM 6 C C4 PG4 . . . C 2 11.844 -1.757 19.286 1 40.16 ? C4 PG4 190 A 1 HETATM 7 O O3 PG4 . . . C 2 11.067 -0.821 18.508 1 42.66 ? O3 PG4 190 A 1 HETATM 8 C C5 PG4 . . . C 2 10.707 0.383 19.179 1 40.42 ? C5 PG4 190 A 1 HETATM 9 C C6 PG4 . . . C 2 9.794 1.224 18.288 1 41.36 ? C6 PG4 190 A 1 HETATM 10 O O4 PG4 . . . C 2 10.463 2.232 17.513 1 41.71 ? O4 PG4 190 A 1 HETATM 11 C C7 PG4 . . . C 2 10.831 3.385 18.278 1 41.59 ? C7 PG4 190 A 1 HETATM 12 C C8 PG4 . . . C 2 11.778 4.269 17.468 1 42.79 ? C8 PG4 190 A 1 HETATM 13 O O5 PG4 . . . C 2 12.759 4.93 18.304 1 46.17 ? O5 PG4 190 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #