data_3APX # _model_server_result.job_id 3dGlO7RjjFhsjJpIyw_0yA _model_server_result.datetime_utc '2024-11-22 12:16:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3apx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":191}' # _entry.id 3APX # _exptl.entry_id 3APX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3APX _cell.length_a 42.125 _cell.length_b 63.077 _cell.length_c 64.957 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3APX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 5 1_555 A SG CYS 148 A CYS 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 73 A CYS 72 1_555 A SG CYS 166 A CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 3APX _atom_sites.fract_transf_matrix[1][1] 0.023739 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015854 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Z80 A 1 190 1 Z80 CZ0 . C 3 ACY A 1 191 1 ACY ACY . D 4 HOH A 1 192 1 HOH HOH . D 4 HOH A 2 193 2 HOH HOH . D 4 HOH A 3 194 3 HOH HOH . D 4 HOH A 4 195 4 HOH HOH . D 4 HOH A 5 196 5 HOH HOH . D 4 HOH A 6 197 6 HOH HOH . D 4 HOH A 7 198 7 HOH HOH . D 4 HOH A 8 199 8 HOH HOH . D 4 HOH A 9 200 9 HOH HOH . D 4 HOH A 10 201 10 HOH HOH . D 4 HOH A 11 202 11 HOH HOH . D 4 HOH A 12 203 12 HOH HOH . D 4 HOH A 13 204 13 HOH HOH . D 4 HOH A 14 205 14 HOH HOH . D 4 HOH A 15 206 15 HOH HOH . D 4 HOH A 16 207 16 HOH HOH . D 4 HOH A 17 208 17 HOH HOH . D 4 HOH A 18 209 18 HOH HOH . D 4 HOH A 19 210 19 HOH HOH . D 4 HOH A 20 211 20 HOH HOH . D 4 HOH A 21 212 21 HOH HOH . D 4 HOH A 22 213 22 HOH HOH . D 4 HOH A 23 214 23 HOH HOH . D 4 HOH A 24 215 25 HOH HOH . D 4 HOH A 25 216 26 HOH HOH . D 4 HOH A 26 217 27 HOH HOH . D 4 HOH A 27 218 28 HOH HOH . D 4 HOH A 28 219 29 HOH HOH . D 4 HOH A 29 220 30 HOH HOH . D 4 HOH A 30 221 31 HOH HOH . D 4 HOH A 31 222 32 HOH HOH . D 4 HOH A 32 223 33 HOH HOH . D 4 HOH A 33 224 34 HOH HOH . D 4 HOH A 34 225 35 HOH HOH . D 4 HOH A 35 226 36 HOH HOH . D 4 HOH A 36 227 37 HOH HOH . D 4 HOH A 37 228 38 HOH HOH . D 4 HOH A 38 229 39 HOH HOH . D 4 HOH A 39 230 40 HOH HOH . D 4 HOH A 40 231 41 HOH HOH . D 4 HOH A 41 232 42 HOH HOH . D 4 HOH A 42 233 43 HOH HOH . D 4 HOH A 43 234 44 HOH HOH . D 4 HOH A 44 235 45 HOH HOH . D 4 HOH A 45 236 46 HOH HOH . D 4 HOH A 46 237 47 HOH HOH . D 4 HOH A 47 238 48 HOH HOH . D 4 HOH A 48 239 49 HOH HOH . D 4 HOH A 49 240 50 HOH HOH . D 4 HOH A 50 241 51 HOH HOH . D 4 HOH A 51 242 52 HOH HOH . D 4 HOH A 52 243 53 HOH HOH . D 4 HOH A 53 244 54 HOH HOH . D 4 HOH A 54 245 55 HOH HOH . D 4 HOH A 55 246 56 HOH HOH . D 4 HOH A 56 247 57 HOH HOH . D 4 HOH A 57 248 58 HOH HOH . D 4 HOH A 58 249 59 HOH HOH . D 4 HOH A 59 250 60 HOH HOH . D 4 HOH A 60 251 61 HOH HOH . D 4 HOH A 61 252 62 HOH HOH . D 4 HOH A 62 253 63 HOH HOH . D 4 HOH A 63 254 64 HOH HOH . D 4 HOH A 64 255 65 HOH HOH . D 4 HOH A 65 256 67 HOH HOH . D 4 HOH A 66 257 68 HOH HOH . D 4 HOH A 67 258 69 HOH HOH . D 4 HOH A 68 259 71 HOH HOH . D 4 HOH A 69 260 72 HOH HOH . D 4 HOH A 70 261 73 HOH HOH . D 4 HOH A 71 262 74 HOH HOH . D 4 HOH A 72 263 75 HOH HOH . D 4 HOH A 73 264 76 HOH HOH . D 4 HOH A 74 265 77 HOH HOH . D 4 HOH A 75 266 78 HOH HOH . D 4 HOH A 76 267 80 HOH HOH . D 4 HOH A 77 268 81 HOH HOH . D 4 HOH A 78 269 82 HOH HOH . D 4 HOH A 79 270 83 HOH HOH . D 4 HOH A 80 271 88 HOH HOH . D 4 HOH A 81 272 90 HOH HOH . D 4 HOH A 82 273 91 HOH HOH . D 4 HOH A 83 274 92 HOH HOH . D 4 HOH A 84 275 93 HOH HOH . D 4 HOH A 85 276 94 HOH HOH . D 4 HOH A 86 277 95 HOH HOH . D 4 HOH A 87 278 96 HOH HOH . D 4 HOH A 88 279 97 HOH HOH . D 4 HOH A 89 280 98 HOH HOH . D 4 HOH A 90 281 99 HOH HOH . D 4 HOH A 91 282 101 HOH HOH . D 4 HOH A 92 283 102 HOH HOH . D 4 HOH A 93 284 103 HOH HOH . D 4 HOH A 94 285 105 HOH HOH . D 4 HOH A 95 286 106 HOH HOH . D 4 HOH A 96 287 107 HOH HOH . D 4 HOH A 97 288 108 HOH HOH . D 4 HOH A 98 289 109 HOH HOH . D 4 HOH A 99 290 110 HOH HOH . D 4 HOH A 100 291 111 HOH HOH . D 4 HOH A 101 292 113 HOH HOH . D 4 HOH A 102 293 114 HOH HOH . D 4 HOH A 103 294 115 HOH HOH . D 4 HOH A 104 295 117 HOH HOH . D 4 HOH A 105 296 118 HOH HOH . D 4 HOH A 106 297 119 HOH HOH . D 4 HOH A 107 298 121 HOH HOH . D 4 HOH A 108 299 123 HOH HOH . D 4 HOH A 109 300 124 HOH HOH . D 4 HOH A 110 301 125 HOH HOH . D 4 HOH A 111 302 127 HOH HOH . D 4 HOH A 112 303 128 HOH HOH . D 4 HOH A 113 304 130 HOH HOH . D 4 HOH A 114 305 131 HOH HOH . D 4 HOH A 115 306 134 HOH HOH . D 4 HOH A 116 307 136 HOH HOH . D 4 HOH A 117 308 137 HOH HOH . D 4 HOH A 118 309 141 HOH HOH . D 4 HOH A 119 310 142 HOH HOH . D 4 HOH A 120 311 143 HOH HOH . D 4 HOH A 121 312 144 HOH HOH . D 4 HOH A 122 313 146 HOH HOH . D 4 HOH A 123 314 150 HOH HOH . D 4 HOH A 124 315 151 HOH HOH . D 4 HOH A 125 316 157 HOH HOH . D 4 HOH A 126 317 158 HOH HOH . D 4 HOH A 127 318 159 HOH HOH . D 4 HOH A 128 319 161 HOH HOH . D 4 HOH A 129 320 162 HOH HOH . D 4 HOH A 130 321 163 HOH HOH . D 4 HOH A 131 322 164 HOH HOH . D 4 HOH A 132 323 166 HOH HOH . D 4 HOH A 133 324 167 HOH HOH . D 4 HOH A 134 325 168 HOH HOH . D 4 HOH A 135 326 169 HOH HOH . D 4 HOH A 136 327 170 HOH HOH . D 4 HOH A 137 328 171 HOH HOH . D 4 HOH A 138 329 172 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . C 3 4.538 -19.216 27.402 1 26.6 ? C ACY 191 A 1 HETATM 2 O O ACY . . . C 3 4.942 -19.321 28.58 1 26.32 ? O ACY 191 A 1 HETATM 3 O OXT ACY . . . C 3 5.267 -18.78 26.481 1 25.8 ? OXT ACY 191 A 1 HETATM 4 C CH3 ACY . . . C 3 3.126 -19.619 27.098 1 26.37 ? CH3 ACY 191 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #