data_3AR7 # _model_server_result.job_id CDHBilFcrJJ74uDsKC1ByQ _model_server_result.datetime_utc '2024-12-03 18:00:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ar7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1000}' # _entry.id 3AR7 # _exptl.entry_id 3AR7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AR7 _cell.length_a 71.515 _cell.length_b 71.515 _cell.length_c 586.334 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AR7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 877 A CYS 876 1_555 A SG CYS 889 A CYS 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A C ACE 1 A ACE 0 1_555 A N MET 2 A MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 A O LEU 712 A LEU 711 1_555 B NA NA . A NA 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc2 A O LYS 713 A LYS 712 1_555 B NA NA . A NA 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.041 ? metalc ? metalc3 A O ALA 715 A ALA 714 1_555 B NA NA . A NA 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc4 A OE1 GLU 733 A GLU 732 1_555 B NA NA . A NA 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc5 B NA NA . A NA 1000 1_555 H O HOH . A HOH 9045 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc6 B NA NA . A NA 1000 1_555 H O HOH . A HOH 9065 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3AR7 _atom_sites.fract_transf_matrix[1][1] 0.013983 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013983 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001706 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 1000 1000 NA NA . C 3 TG1 A 1 1003 1003 TG1 TG1 . D 4 128 A 1 1002 1002 128 128 . E 5 PTY A 1 1011 1011 PTY PTY . F 5 PTY A 1 1012 1012 PTY PTY . G 5 PTY A 1 1013 1013 PTY PTY . H 6 HOH A 1 9001 9001 HOH HOH . H 6 HOH A 2 9002 9002 HOH HOH . H 6 HOH A 3 9003 9003 HOH HOH . H 6 HOH A 4 9004 9004 HOH HOH . H 6 HOH A 5 9005 9005 HOH HOH . H 6 HOH A 6 9006 9006 HOH HOH . H 6 HOH A 7 9007 9007 HOH HOH . H 6 HOH A 8 9008 9008 HOH HOH . H 6 HOH A 9 9010 9010 HOH HOH . H 6 HOH A 10 9011 9011 HOH HOH . H 6 HOH A 11 9012 9012 HOH HOH . H 6 HOH A 12 9013 9013 HOH HOH . H 6 HOH A 13 9014 9014 HOH HOH . H 6 HOH A 14 9015 9015 HOH HOH . H 6 HOH A 15 9016 9016 HOH HOH . H 6 HOH A 16 9018 9018 HOH HOH . H 6 HOH A 17 9019 9019 HOH HOH . H 6 HOH A 18 9020 9020 HOH HOH . H 6 HOH A 19 9021 9021 HOH HOH . H 6 HOH A 20 9025 9025 HOH HOH . H 6 HOH A 21 9027 9027 HOH HOH . H 6 HOH A 22 9028 9028 HOH HOH . H 6 HOH A 23 9029 9029 HOH HOH . H 6 HOH A 24 9030 9030 HOH HOH . H 6 HOH A 25 9031 9031 HOH HOH . H 6 HOH A 26 9032 9032 HOH HOH . H 6 HOH A 27 9033 9033 HOH HOH . H 6 HOH A 28 9034 9034 HOH HOH . H 6 HOH A 29 9036 9036 HOH HOH . H 6 HOH A 30 9037 9037 HOH HOH . H 6 HOH A 31 9038 9038 HOH HOH . H 6 HOH A 32 9039 9039 HOH HOH . H 6 HOH A 33 9040 9040 HOH HOH . H 6 HOH A 34 9042 9042 HOH HOH . H 6 HOH A 35 9043 9043 HOH HOH . H 6 HOH A 36 9044 9044 HOH HOH . H 6 HOH A 37 9045 9045 HOH HOH . H 6 HOH A 38 9046 9046 HOH HOH . H 6 HOH A 39 9047 9047 HOH HOH . H 6 HOH A 40 9048 9048 HOH HOH . H 6 HOH A 41 9049 9049 HOH HOH . H 6 HOH A 42 9050 9050 HOH HOH . H 6 HOH A 43 9051 9051 HOH HOH . H 6 HOH A 44 9052 9052 HOH HOH . H 6 HOH A 45 9055 9055 HOH HOH . H 6 HOH A 46 9056 9056 HOH HOH . H 6 HOH A 47 9057 9057 HOH HOH . H 6 HOH A 48 9058 9058 HOH HOH . H 6 HOH A 49 9059 9059 HOH HOH . H 6 HOH A 50 9060 9060 HOH HOH . H 6 HOH A 51 9061 9061 HOH HOH . H 6 HOH A 52 9062 9062 HOH HOH . H 6 HOH A 53 9063 9063 HOH HOH . H 6 HOH A 54 9064 9064 HOH HOH . H 6 HOH A 55 9065 9065 HOH HOH . H 6 HOH A 56 9066 9066 HOH HOH . H 6 HOH A 57 9067 9067 HOH HOH . H 6 HOH A 58 9068 9068 HOH HOH . H 6 HOH A 59 9070 9070 HOH HOH . H 6 HOH A 60 9071 9071 HOH HOH . H 6 HOH A 61 9072 9072 HOH HOH . H 6 HOH A 62 9073 9073 HOH HOH . H 6 HOH A 63 9074 9074 HOH HOH . H 6 HOH A 64 9076 9076 HOH HOH . H 6 HOH A 65 9077 9077 HOH HOH . H 6 HOH A 66 9078 9078 HOH HOH . H 6 HOH A 67 9079 9079 HOH HOH . H 6 HOH A 68 9080 9080 HOH HOH . H 6 HOH A 69 9081 9081 HOH HOH . H 6 HOH A 70 9082 9082 HOH HOH . H 6 HOH A 71 9083 9083 HOH HOH . H 6 HOH A 72 9084 9084 HOH HOH . H 6 HOH A 73 9085 9085 HOH HOH . H 6 HOH A 74 9086 9086 HOH HOH . H 6 HOH A 75 9088 9088 HOH HOH . H 6 HOH A 76 9089 9089 HOH HOH . H 6 HOH A 77 9090 9090 HOH HOH . H 6 HOH A 78 9091 9091 HOH HOH . H 6 HOH A 79 9092 9092 HOH HOH . H 6 HOH A 80 9093 9093 HOH HOH . H 6 HOH A 81 9094 9094 HOH HOH . H 6 HOH A 82 9095 9095 HOH HOH . H 6 HOH A 83 9098 9098 HOH HOH . H 6 HOH A 84 9099 9099 HOH HOH . H 6 HOH A 85 9100 9100 HOH HOH . H 6 HOH A 86 9101 9101 HOH HOH . H 6 HOH A 87 9102 9102 HOH HOH . H 6 HOH A 88 9103 9103 HOH HOH . H 6 HOH A 89 9104 9104 HOH HOH . H 6 HOH A 90 9105 9105 HOH HOH . H 6 HOH A 91 9106 9106 HOH HOH . H 6 HOH A 92 9107 9107 HOH HOH . H 6 HOH A 93 9108 9108 HOH HOH . H 6 HOH A 94 9109 9109 HOH HOH . H 6 HOH A 95 9110 9110 HOH HOH . H 6 HOH A 96 9111 9111 HOH HOH . H 6 HOH A 97 9112 9112 HOH HOH . H 6 HOH A 98 9113 9113 HOH HOH . H 6 HOH A 99 9114 9114 HOH HOH . H 6 HOH A 100 9115 9115 HOH HOH . H 6 HOH A 101 9116 9116 HOH HOH . H 6 HOH A 102 9117 9117 HOH HOH . H 6 HOH A 103 9118 9118 HOH HOH . H 6 HOH A 104 9119 9119 HOH HOH . H 6 HOH A 105 9120 9120 HOH HOH . H 6 HOH A 106 9121 9121 HOH HOH . H 6 HOH A 107 9122 9122 HOH HOH . H 6 HOH A 108 9123 9123 HOH HOH . H 6 HOH A 109 9124 9124 HOH HOH . H 6 HOH A 110 9125 9125 HOH HOH . H 6 HOH A 111 9126 9126 HOH HOH . H 6 HOH A 112 9127 9127 HOH HOH . H 6 HOH A 113 9128 9128 HOH HOH . H 6 HOH A 114 9129 9129 HOH HOH . H 6 HOH A 115 9130 9130 HOH HOH . H 6 HOH A 116 9131 9131 HOH HOH . H 6 HOH A 117 9132 9132 HOH HOH . H 6 HOH A 118 9133 9133 HOH HOH . H 6 HOH A 119 9134 9134 HOH HOH . H 6 HOH A 120 9135 9135 HOH HOH . H 6 HOH A 121 9136 9136 HOH HOH . H 6 HOH A 122 9139 9139 HOH HOH . H 6 HOH A 123 9140 9140 HOH HOH . H 6 HOH A 124 9141 9141 HOH HOH . H 6 HOH A 125 9142 9142 HOH HOH . H 6 HOH A 126 9143 9143 HOH HOH . H 6 HOH A 127 9144 9144 HOH HOH . H 6 HOH A 128 9145 9145 HOH HOH . H 6 HOH A 129 9146 9146 HOH HOH . H 6 HOH A 130 9147 9147 HOH HOH . H 6 HOH A 131 9148 9148 HOH HOH . H 6 HOH A 132 9149 9149 HOH HOH . H 6 HOH A 133 9150 9150 HOH HOH . H 6 HOH A 134 9151 9151 HOH HOH . H 6 HOH A 135 9152 9152 HOH HOH . H 6 HOH A 136 9153 9153 HOH HOH . H 6 HOH A 137 9155 9155 HOH HOH . H 6 HOH A 138 9157 9157 HOH HOH . H 6 HOH A 139 9158 9158 HOH HOH . H 6 HOH A 140 9159 9159 HOH HOH . H 6 HOH A 141 9160 9160 HOH HOH . H 6 HOH A 142 9161 9161 HOH HOH . H 6 HOH A 143 9166 9166 HOH HOH . H 6 HOH A 144 9167 9167 HOH HOH . H 6 HOH A 145 9168 9168 HOH HOH . H 6 HOH A 146 9169 9169 HOH HOH . H 6 HOH A 147 9172 9172 HOH HOH . H 6 HOH A 148 9173 9173 HOH HOH . H 6 HOH A 149 9174 9174 HOH HOH . H 6 HOH A 150 9175 9175 HOH HOH . H 6 HOH A 151 9176 9176 HOH HOH . H 6 HOH A 152 9178 9178 HOH HOH . H 6 HOH A 153 9179 9179 HOH HOH . H 6 HOH A 154 9186 9186 HOH HOH . H 6 HOH A 155 9187 9187 HOH HOH . H 6 HOH A 156 9188 9188 HOH HOH . H 6 HOH A 157 9189 9189 HOH HOH . H 6 HOH A 158 9190 9190 HOH HOH . H 6 HOH A 159 9192 9192 HOH HOH . H 6 HOH A 160 9193 9193 HOH HOH . H 6 HOH A 161 9194 9194 HOH HOH . H 6 HOH A 162 9195 9195 HOH HOH . H 6 HOH A 163 9196 9196 HOH HOH . H 6 HOH A 164 9197 9197 HOH HOH . H 6 HOH A 165 9198 9198 HOH HOH . H 6 HOH A 166 9199 9199 HOH HOH . H 6 HOH A 167 9201 9201 HOH HOH . H 6 HOH A 168 9202 9202 HOH HOH . H 6 HOH A 169 9204 9204 HOH HOH . H 6 HOH A 170 9205 9205 HOH HOH . H 6 HOH A 171 9206 9206 HOH HOH . H 6 HOH A 172 9208 9208 HOH HOH . H 6 HOH A 173 9209 9209 HOH HOH . H 6 HOH A 174 9210 9210 HOH HOH . H 6 HOH A 175 9212 9212 HOH HOH . H 6 HOH A 176 9213 9213 HOH HOH . H 6 HOH A 177 9214 9214 HOH HOH . H 6 HOH A 178 9217 9217 HOH HOH . H 6 HOH A 179 9219 9219 HOH HOH . H 6 HOH A 180 9220 9220 HOH HOH . H 6 HOH A 181 9224 9224 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 40.905 _atom_site.Cartn_y -10.119 _atom_site.Cartn_z 109.153 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 1000 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #