data_3AVM
#
_model_server_result.job_id            cXPXw109UquupuJFcW_GKg 
_model_server_result.datetime_utc      '2024-11-23 05:44:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3avm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":3}' 
#
_entry.id    3AVM 
#
_exptl.entry_id    3AVM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              60.052 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3AVM 
_cell.length_a            70.768 
_cell.length_b            70.768 
_cell.length_c            67.279 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3AVM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C N SER 1 D SER 1 1_555 C C ASP 8 D ASP 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 D N SER 1 F SER 1 1_555 D C ASP 8 F ASP 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
#
_chem_comp.formula           'C2 H4 O2' 
_chem_comp.formula_weight    60.052 
_chem_comp.id                ACY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACY doub 1 n n 
C OXT ACY sing 2 n n 
C CH3 ACY sing 3 n n 
OXT HXT ACY sing 4 n n 
CH3 H1 ACY sing 5 n n 
CH3 H2 ACY sing 6 n n 
CH3 H3 ACY sing 7 n n 
#
_atom_sites.entry_id                     3AVM 
_atom_sites.fract_transf_matrix[1][1]    0.014131 
_atom_sites.fract_transf_matrix[1][2]    0.008158 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016317 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014864 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SO4 A 1 2 2 SO4 SO4 . 
F 3 SO4 A 1 4 4 SO4 SO4 . 
G 3 SO4 A 1 6 6 SO4 SO4 . 
H 3 SO4 A 1 7 7 SO4 SO4 . 
I 4 CL A 1 213 2 CL CL . 
J 5 ACY A 1 214 2 ACY ACY . 
K 5 ACY A 1 3 3 ACY ACY . 
L 5 ACY A 1 215 4 ACY ACY . 
M 3 SO4 B 1 1 1 SO4 SO4 . 
N 3 SO4 B 1 3 3 SO4 SO4 . 
O 3 SO4 B 1 5 5 SO4 SO4 . 
P 3 SO4 B 1 8 8 SO4 SO4 . 
Q 4 CL B 1 213 1 CL CL . 
R 5 ACY B 1 214 1 ACY ACY . 
S 6 HOH A 1 5 5 HOH HOH . 
S 6 HOH A 2 8 8 HOH HOH . 
S 6 HOH A 3 9 9 HOH HOH . 
S 6 HOH A 4 12 12 HOH HOH . 
S 6 HOH A 5 16 16 HOH HOH . 
S 6 HOH A 6 17 17 HOH HOH . 
S 6 HOH A 7 19 19 HOH HOH . 
S 6 HOH A 8 20 20 HOH HOH . 
S 6 HOH A 9 21 21 HOH HOH . 
S 6 HOH A 10 23 23 HOH HOH . 
S 6 HOH A 11 24 24 HOH HOH . 
S 6 HOH A 12 28 28 HOH HOH . 
S 6 HOH A 13 29 29 HOH HOH . 
S 6 HOH A 14 216 2 HOH HOH . 
S 6 HOH A 15 217 3 HOH HOH . 
S 6 HOH A 16 218 32 HOH HOH . 
S 6 HOH A 17 219 33 HOH HOH . 
S 6 HOH A 18 220 35 HOH HOH . 
S 6 HOH A 19 221 36 HOH HOH . 
S 6 HOH A 20 222 40 HOH HOH . 
S 6 HOH A 21 223 43 HOH HOH . 
S 6 HOH A 22 224 44 HOH HOH . 
S 6 HOH A 23 225 45 HOH HOH . 
S 6 HOH A 24 226 50 HOH HOH . 
S 6 HOH A 25 227 51 HOH HOH . 
S 6 HOH A 26 228 53 HOH HOH . 
S 6 HOH A 27 229 56 HOH HOH . 
S 6 HOH A 28 230 57 HOH HOH . 
S 6 HOH A 29 231 59 HOH HOH . 
S 6 HOH A 30 232 61 HOH HOH . 
S 6 HOH A 31 233 63 HOH HOH . 
S 6 HOH A 32 234 64 HOH HOH . 
S 6 HOH A 33 235 65 HOH HOH . 
S 6 HOH A 34 236 66 HOH HOH . 
S 6 HOH A 35 237 67 HOH HOH . 
S 6 HOH A 36 238 68 HOH HOH . 
S 6 HOH A 37 239 70 HOH HOH . 
S 6 HOH A 38 240 71 HOH HOH . 
S 6 HOH A 39 241 73 HOH HOH . 
S 6 HOH A 40 242 74 HOH HOH . 
S 6 HOH A 41 243 76 HOH HOH . 
S 6 HOH A 42 244 77 HOH HOH . 
S 6 HOH A 43 245 80 HOH HOH . 
S 6 HOH A 44 246 83 HOH HOH . 
S 6 HOH A 45 247 85 HOH HOH . 
S 6 HOH A 46 248 87 HOH HOH . 
S 6 HOH A 47 249 91 HOH HOH . 
S 6 HOH A 48 250 93 HOH HOH . 
S 6 HOH A 49 251 97 HOH HOH . 
S 6 HOH A 50 252 98 HOH HOH . 
S 6 HOH A 51 253 102 HOH HOH . 
S 6 HOH A 52 254 105 HOH HOH . 
S 6 HOH A 53 255 106 HOH HOH . 
S 6 HOH A 54 256 107 HOH HOH . 
S 6 HOH A 55 257 108 HOH HOH . 
S 6 HOH A 56 258 111 HOH HOH . 
S 6 HOH A 57 259 112 HOH HOH . 
S 6 HOH A 58 260 113 HOH HOH . 
S 6 HOH A 59 261 114 HOH HOH . 
S 6 HOH A 60 262 118 HOH HOH . 
S 6 HOH A 61 263 119 HOH HOH . 
S 6 HOH A 62 264 129 HOH HOH . 
S 6 HOH A 63 265 130 HOH HOH . 
S 6 HOH A 64 266 132 HOH HOH . 
S 6 HOH A 65 267 133 HOH HOH . 
S 6 HOH A 66 268 134 HOH HOH . 
S 6 HOH A 67 269 140 HOH HOH . 
S 6 HOH A 68 270 142 HOH HOH . 
S 6 HOH A 69 271 143 HOH HOH . 
S 6 HOH A 70 272 147 HOH HOH . 
T 6 HOH B 1 4 4 HOH HOH . 
T 6 HOH B 2 6 6 HOH HOH . 
T 6 HOH B 3 7 7 HOH HOH . 
T 6 HOH B 4 10 10 HOH HOH . 
T 6 HOH B 5 11 11 HOH HOH . 
T 6 HOH B 6 13 13 HOH HOH . 
T 6 HOH B 7 14 14 HOH HOH . 
T 6 HOH B 8 15 15 HOH HOH . 
T 6 HOH B 9 18 18 HOH HOH . 
T 6 HOH B 10 22 22 HOH HOH . 
T 6 HOH B 11 25 25 HOH HOH . 
T 6 HOH B 12 26 26 HOH HOH . 
T 6 HOH B 13 27 27 HOH HOH . 
T 6 HOH B 14 215 1 HOH HOH . 
T 6 HOH B 15 216 30 HOH HOH . 
T 6 HOH B 16 217 31 HOH HOH . 
T 6 HOH B 17 218 34 HOH HOH . 
T 6 HOH B 18 219 37 HOH HOH . 
T 6 HOH B 19 220 38 HOH HOH . 
T 6 HOH B 20 221 39 HOH HOH . 
T 6 HOH B 21 222 41 HOH HOH . 
T 6 HOH B 22 223 42 HOH HOH . 
T 6 HOH B 23 224 46 HOH HOH . 
T 6 HOH B 24 225 47 HOH HOH . 
T 6 HOH B 25 226 48 HOH HOH . 
T 6 HOH B 26 227 49 HOH HOH . 
T 6 HOH B 27 228 52 HOH HOH . 
T 6 HOH B 28 229 54 HOH HOH . 
T 6 HOH B 29 230 55 HOH HOH . 
T 6 HOH B 30 231 58 HOH HOH . 
T 6 HOH B 31 232 60 HOH HOH . 
T 6 HOH B 32 233 62 HOH HOH . 
T 6 HOH B 33 234 69 HOH HOH . 
T 6 HOH B 34 235 72 HOH HOH . 
T 6 HOH B 35 236 75 HOH HOH . 
T 6 HOH B 36 237 78 HOH HOH . 
T 6 HOH B 37 238 79 HOH HOH . 
T 6 HOH B 38 239 81 HOH HOH . 
T 6 HOH B 39 240 82 HOH HOH . 
T 6 HOH B 40 241 84 HOH HOH . 
T 6 HOH B 41 242 86 HOH HOH . 
T 6 HOH B 42 243 88 HOH HOH . 
T 6 HOH B 43 244 89 HOH HOH . 
T 6 HOH B 44 245 90 HOH HOH . 
T 6 HOH B 45 246 92 HOH HOH . 
T 6 HOH B 46 247 94 HOH HOH . 
T 6 HOH B 47 248 95 HOH HOH . 
T 6 HOH B 48 249 96 HOH HOH . 
T 6 HOH B 49 250 99 HOH HOH . 
T 6 HOH B 50 251 100 HOH HOH . 
T 6 HOH B 51 252 101 HOH HOH . 
T 6 HOH B 52 253 103 HOH HOH . 
T 6 HOH B 53 254 104 HOH HOH . 
T 6 HOH B 54 255 109 HOH HOH . 
T 6 HOH B 55 256 110 HOH HOH . 
T 6 HOH B 56 257 115 HOH HOH . 
T 6 HOH B 57 258 116 HOH HOH . 
T 6 HOH B 58 259 117 HOH HOH . 
T 6 HOH B 59 260 120 HOH HOH . 
T 6 HOH B 60 261 121 HOH HOH . 
T 6 HOH B 61 262 122 HOH HOH . 
T 6 HOH B 62 263 123 HOH HOH . 
T 6 HOH B 63 264 124 HOH HOH . 
T 6 HOH B 64 265 125 HOH HOH . 
T 6 HOH B 65 266 126 HOH HOH . 
T 6 HOH B 66 267 127 HOH HOH . 
T 6 HOH B 67 268 128 HOH HOH . 
T 6 HOH B 68 269 131 HOH HOH . 
T 6 HOH B 69 270 135 HOH HOH . 
T 6 HOH B 70 271 136 HOH HOH . 
T 6 HOH B 71 272 137 HOH HOH . 
T 6 HOH B 72 273 138 HOH HOH . 
T 6 HOH B 73 274 139 HOH HOH . 
T 6 HOH B 74 275 145 HOH HOH . 
T 6 HOH B 75 276 146 HOH HOH . 
U 6 HOH D 1 141 141 HOH HOH . 
V 6 HOH F 1 144 144 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACY . . . K 5 20.708 -37.335 7.615 1 29.38 ? C ACY 3 A 1 
HETATM 2 O O ACY . . . K 5 20.095 -36.931 8.675 1 28.56 ? O ACY 3 A 1 
HETATM 3 O OXT ACY . . . K 5 22.042 -37.433 7.578 1 33.55 ? OXT ACY 3 A 1 
HETATM 4 C CH3 ACY . . . K 5 19.979 -37.79 6.365 1 31.27 ? CH3 ACY 3 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#