data_3AVO # _model_server_result.job_id BtkXama8GUYpWN_cTDB5qw _model_server_result.datetime_utc '2024-10-11 19:27:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3avo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":314}' # _entry.id 3AVO # _exptl.entry_id 3AVO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 219.235 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PANTOTHENOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3AVO _cell.length_a 103.39 _cell.length_b 103.39 _cell.length_c 91 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AVO _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H17 N O5' _chem_comp.formula_weight 219.235 _chem_comp.id PAU _chem_comp.mon_nstd_flag . _chem_comp.name 'PANTOTHENOIC ACID' _chem_comp.type peptide-like _chem_comp.pdbx_synonyms N-[(2R)-2,4-DIHYDROXY-3,3-DIMETHYLBUTANOYL]-BETA-ALANINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C2 PAU sing 267 n n O2 HO PAU sing 268 n n C1 C2 PAU sing 269 n n C1 C3 PAU sing 270 n n C1 C4 PAU sing 271 n n C1 C5 PAU sing 272 n n C2 H21 PAU sing 273 n n C2 H22 PAU sing 274 n n C3 H31 PAU sing 275 n n C3 H32 PAU sing 276 n n C3 H33 PAU sing 277 n n C4 H41 PAU sing 278 n n C4 H42 PAU sing 279 n n C4 H43 PAU sing 280 n n C5 O5' PAU sing 281 n n C5 C6 PAU sing 282 n n C5 H5 PAU sing 283 n n O5' H5' PAU sing 284 n n C6 O6' PAU doub 285 n n C6 N PAU sing 286 n n N C8 PAU sing 287 n n N H PAU sing 288 n n C8 C9 PAU sing 289 n n C8 H81 PAU sing 290 n n C8 H82 PAU sing 291 n n C9 C PAU sing 292 n n C9 H91 PAU sing 293 n n C9 H92 PAU sing 294 n n C OXT PAU sing 295 n n C O PAU doub 296 n n OXT HXT PAU sing 297 n n # _atom_sites.entry_id 3AVO _atom_sites.fract_transf_matrix[1][1] 0.009672 _atom_sites.fract_transf_matrix[1][2] 0.005584 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010989 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FLC A 1 313 313 FLC FLC . C 3 PAU A 1 314 314 PAU PAU . D 4 GOL A 1 315 315 GOL GOL . E 4 GOL A 1 316 316 GOL GOL . F 4 GOL A 1 317 317 GOL GOL . G 4 GOL A 1 318 318 GOL GOL . H 4 GOL A 1 319 319 GOL GOL . I 4 GOL A 1 320 320 GOL GOL . J 4 GOL A 1 321 321 GOL GOL . K 4 GOL A 1 322 322 GOL GOL . L 4 GOL A 1 323 323 GOL GOL . M 5 HOH A 1 324 324 HOH HOH . M 5 HOH A 2 325 325 HOH HOH . M 5 HOH A 3 326 326 HOH HOH . M 5 HOH A 4 327 327 HOH HOH . M 5 HOH A 5 328 328 HOH HOH . M 5 HOH A 6 329 329 HOH HOH . M 5 HOH A 7 330 330 HOH HOH . M 5 HOH A 8 331 331 HOH HOH . M 5 HOH A 9 332 332 HOH HOH . M 5 HOH A 10 333 333 HOH HOH . M 5 HOH A 11 334 334 HOH HOH . M 5 HOH A 12 335 335 HOH HOH . M 5 HOH A 13 336 336 HOH HOH . M 5 HOH A 14 337 337 HOH HOH . M 5 HOH A 15 338 338 HOH HOH . M 5 HOH A 16 339 339 HOH HOH . M 5 HOH A 17 340 340 HOH HOH . M 5 HOH A 18 341 341 HOH HOH . M 5 HOH A 19 342 342 HOH HOH . M 5 HOH A 20 343 343 HOH HOH . M 5 HOH A 21 344 344 HOH HOH . M 5 HOH A 22 345 345 HOH HOH . M 5 HOH A 23 346 346 HOH HOH . M 5 HOH A 24 347 347 HOH HOH . M 5 HOH A 25 348 348 HOH HOH . M 5 HOH A 26 349 349 HOH HOH . M 5 HOH A 27 350 350 HOH HOH . M 5 HOH A 28 351 351 HOH HOH . M 5 HOH A 29 352 352 HOH HOH . M 5 HOH A 30 353 353 HOH HOH . M 5 HOH A 31 354 354 HOH HOH . M 5 HOH A 32 355 355 HOH HOH . M 5 HOH A 33 356 356 HOH HOH . M 5 HOH A 34 357 357 HOH HOH . M 5 HOH A 35 358 358 HOH HOH . M 5 HOH A 36 359 359 HOH HOH . M 5 HOH A 37 360 360 HOH HOH . M 5 HOH A 38 361 361 HOH HOH . M 5 HOH A 39 362 362 HOH HOH . M 5 HOH A 40 363 363 HOH HOH . M 5 HOH A 41 364 364 HOH HOH . M 5 HOH A 42 365 365 HOH HOH . M 5 HOH A 43 366 366 HOH HOH . M 5 HOH A 44 367 367 HOH HOH . M 5 HOH A 45 368 368 HOH HOH . M 5 HOH A 46 369 369 HOH HOH . M 5 HOH A 47 370 370 HOH HOH . M 5 HOH A 48 371 371 HOH HOH . M 5 HOH A 49 372 372 HOH HOH . M 5 HOH A 50 373 373 HOH HOH . M 5 HOH A 51 374 374 HOH HOH . M 5 HOH A 52 375 375 HOH HOH . M 5 HOH A 53 376 376 HOH HOH . M 5 HOH A 54 377 377 HOH HOH . M 5 HOH A 55 378 378 HOH HOH . M 5 HOH A 56 379 379 HOH HOH . M 5 HOH A 57 380 380 HOH HOH . M 5 HOH A 58 381 381 HOH HOH . M 5 HOH A 59 382 382 HOH HOH . M 5 HOH A 60 383 383 HOH HOH . M 5 HOH A 61 384 384 HOH HOH . M 5 HOH A 62 385 385 HOH HOH . M 5 HOH A 63 386 386 HOH HOH . M 5 HOH A 64 387 387 HOH HOH . M 5 HOH A 65 388 388 HOH HOH . M 5 HOH A 66 389 389 HOH HOH . M 5 HOH A 67 390 390 HOH HOH . M 5 HOH A 68 391 391 HOH HOH . M 5 HOH A 69 392 392 HOH HOH . M 5 HOH A 70 393 393 HOH HOH . M 5 HOH A 71 394 394 HOH HOH . M 5 HOH A 72 395 395 HOH HOH . M 5 HOH A 73 396 396 HOH HOH . M 5 HOH A 74 397 397 HOH HOH . M 5 HOH A 75 398 398 HOH HOH . M 5 HOH A 76 399 399 HOH HOH . M 5 HOH A 77 400 400 HOH HOH . M 5 HOH A 78 401 401 HOH HOH . M 5 HOH A 79 402 402 HOH HOH . M 5 HOH A 80 403 403 HOH HOH . M 5 HOH A 81 404 404 HOH HOH . M 5 HOH A 82 405 405 HOH HOH . M 5 HOH A 83 406 406 HOH HOH . M 5 HOH A 84 407 407 HOH HOH . M 5 HOH A 85 408 408 HOH HOH . M 5 HOH A 86 409 409 HOH HOH . M 5 HOH A 87 410 410 HOH HOH . M 5 HOH A 88 411 411 HOH HOH . M 5 HOH A 89 412 412 HOH HOH . M 5 HOH A 90 413 413 HOH HOH . M 5 HOH A 91 414 414 HOH HOH . M 5 HOH A 92 415 415 HOH HOH . M 5 HOH A 93 416 416 HOH HOH . M 5 HOH A 94 417 417 HOH HOH . M 5 HOH A 95 418 418 HOH HOH . M 5 HOH A 96 419 419 HOH HOH . M 5 HOH A 97 420 420 HOH HOH . M 5 HOH A 98 421 421 HOH HOH . M 5 HOH A 99 422 422 HOH HOH . M 5 HOH A 100 423 423 HOH HOH . M 5 HOH A 101 424 424 HOH HOH . M 5 HOH A 102 425 425 HOH HOH . M 5 HOH A 103 426 426 HOH HOH . M 5 HOH A 104 427 427 HOH HOH . M 5 HOH A 105 428 428 HOH HOH . M 5 HOH A 106 429 429 HOH HOH . M 5 HOH A 107 430 430 HOH HOH . M 5 HOH A 108 431 431 HOH HOH . M 5 HOH A 109 432 432 HOH HOH . M 5 HOH A 110 433 433 HOH HOH . M 5 HOH A 111 434 434 HOH HOH . M 5 HOH A 112 435 435 HOH HOH . M 5 HOH A 113 436 436 HOH HOH . M 5 HOH A 114 437 437 HOH HOH . M 5 HOH A 115 438 438 HOH HOH . M 5 HOH A 116 439 439 HOH HOH . M 5 HOH A 117 440 440 HOH HOH . M 5 HOH A 118 441 441 HOH HOH . M 5 HOH A 119 442 442 HOH HOH . M 5 HOH A 120 443 443 HOH HOH . M 5 HOH A 121 444 444 HOH HOH . M 5 HOH A 122 445 445 HOH HOH . M 5 HOH A 123 446 446 HOH HOH . M 5 HOH A 124 447 447 HOH HOH . M 5 HOH A 125 448 448 HOH HOH . M 5 HOH A 126 449 449 HOH HOH . M 5 HOH A 127 450 450 HOH HOH . M 5 HOH A 128 451 451 HOH HOH . M 5 HOH A 129 452 452 HOH HOH . M 5 HOH A 130 453 453 HOH HOH . M 5 HOH A 131 454 454 HOH HOH . M 5 HOH A 132 455 455 HOH HOH . M 5 HOH A 133 456 456 HOH HOH . M 5 HOH A 134 457 457 HOH HOH . M 5 HOH A 135 458 458 HOH HOH . M 5 HOH A 136 459 459 HOH HOH . M 5 HOH A 137 460 460 HOH HOH . M 5 HOH A 138 461 461 HOH HOH . M 5 HOH A 139 462 462 HOH HOH . M 5 HOH A 140 463 463 HOH HOH . M 5 HOH A 141 464 464 HOH HOH . M 5 HOH A 142 465 465 HOH HOH . M 5 HOH A 143 466 466 HOH HOH . M 5 HOH A 144 467 467 HOH HOH . M 5 HOH A 145 468 468 HOH HOH . M 5 HOH A 146 469 469 HOH HOH . M 5 HOH A 147 470 470 HOH HOH . M 5 HOH A 148 471 471 HOH HOH . M 5 HOH A 149 472 472 HOH HOH . M 5 HOH A 150 473 473 HOH HOH . M 5 HOH A 151 474 474 HOH HOH . M 5 HOH A 152 475 475 HOH HOH . M 5 HOH A 153 476 476 HOH HOH . M 5 HOH A 154 477 477 HOH HOH . M 5 HOH A 155 478 478 HOH HOH . M 5 HOH A 156 479 479 HOH HOH . M 5 HOH A 157 480 480 HOH HOH . M 5 HOH A 158 481 481 HOH HOH . M 5 HOH A 159 482 482 HOH HOH . M 5 HOH A 160 483 483 HOH HOH . M 5 HOH A 161 484 484 HOH HOH . M 5 HOH A 162 485 485 HOH HOH . M 5 HOH A 163 486 486 HOH HOH . M 5 HOH A 164 487 487 HOH HOH . M 5 HOH A 165 488 488 HOH HOH . M 5 HOH A 166 489 489 HOH HOH . M 5 HOH A 167 490 490 HOH HOH . M 5 HOH A 168 491 491 HOH HOH . M 5 HOH A 169 492 492 HOH HOH . M 5 HOH A 170 493 493 HOH HOH . M 5 HOH A 171 494 494 HOH HOH . M 5 HOH A 172 495 495 HOH HOH . M 5 HOH A 173 496 496 HOH HOH . M 5 HOH A 174 497 497 HOH HOH . M 5 HOH A 175 498 498 HOH HOH . M 5 HOH A 176 499 499 HOH HOH . M 5 HOH A 177 500 500 HOH HOH . M 5 HOH A 178 501 501 HOH HOH . M 5 HOH A 179 502 502 HOH HOH . M 5 HOH A 180 503 503 HOH HOH . M 5 HOH A 181 504 504 HOH HOH . M 5 HOH A 182 505 505 HOH HOH . M 5 HOH A 183 506 506 HOH HOH . M 5 HOH A 184 507 507 HOH HOH . M 5 HOH A 185 508 508 HOH HOH . M 5 HOH A 186 509 509 HOH HOH . M 5 HOH A 187 510 510 HOH HOH . M 5 HOH A 188 511 511 HOH HOH . M 5 HOH A 189 512 512 HOH HOH . M 5 HOH A 190 513 513 HOH HOH . M 5 HOH A 191 514 514 HOH HOH . M 5 HOH A 192 515 515 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 PAU . . . C 3 41.971 34.644 10.451 1 88.88 ? O2 PAU 314 A 1 HETATM 2 C C1 PAU . . . C 3 42.311 35.088 12.804 1 88.88 ? C1 PAU 314 A 1 HETATM 3 C C2 PAU . . . C 3 41.587 35.508 11.524 1 88.88 ? C2 PAU 314 A 1 HETATM 4 C C3 PAU . . . C 3 42.541 33.576 12.75 1 88.88 ? C3 PAU 314 A 1 HETATM 5 C C4 PAU . . . C 3 41.429 35.412 14.011 1 88.88 ? C4 PAU 314 A 1 HETATM 6 C C5 PAU . . . C 3 43.667 35.79 12.937 1 88.88 ? C5 PAU 314 A 1 HETATM 7 O O5' PAU . . . C 3 44.528 35.389 11.868 1 88.88 ? O5' PAU 314 A 1 HETATM 8 C C6 PAU . . . C 3 43.513 37.314 12.943 1 88.88 ? C6 PAU 314 A 1 HETATM 9 O O6' PAU . . . C 3 42.413 37.846 13.08 1 88.88 ? O6' PAU 314 A 1 HETATM 10 N N PAU . . . C 3 44.646 38.001 12.811 1 88.88 ? N PAU 314 A 1 HETATM 11 C C8 PAU . . . C 3 44.655 39.471 12.79 1 88.88 ? C8 PAU 314 A 1 HETATM 12 C C9 PAU . . . C 3 46.084 40.002 12.649 1 88.88 ? C9 PAU 314 A 1 HETATM 13 C C PAU . . . C 3 46.913 39.72 13.903 1 88.88 ? C PAU 314 A 1 HETATM 14 O OXT PAU . . . C 3 47.861 40.5 14.145 1 88.88 ? OXT PAU 314 A 1 HETATM 15 O O PAU . . . C 3 46.577 38.737 14.597 1 88.88 ? O PAU 314 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #