data_3AW8 # _model_server_result.job_id y08Lq01_pUCuiEnVvj-f9A _model_server_result.datetime_utc '2024-11-05 00:40:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3aw8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":370}' # _entry.id 3AW8 # _exptl.entry_id 3AW8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 347.221 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ADENOSINE MONOPHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AW8 _cell.length_a 81.26 _cell.length_b 81.26 _cell.length_c 203.163 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AW8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C10 H14 N5 O7 P' _chem_comp.formula_weight 347.221 _chem_comp.id AMP _chem_comp.mon_nstd_flag . _chem_comp.name 'ADENOSINE MONOPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P AMP doub 13 n n P O2P AMP sing 14 n n P O3P AMP sing 15 n n P O5' AMP sing 16 n n O2P HOP2 AMP sing 17 n n O3P HOP3 AMP sing 18 n n O5' C5' AMP sing 19 n n C5' C4' AMP sing 20 n n C5' "H5'1" AMP sing 21 n n C5' "H5'2" AMP sing 22 n n C4' O4' AMP sing 23 n n C4' C3' AMP sing 24 n n C4' H4' AMP sing 25 n n O4' C1' AMP sing 26 n n C3' O3' AMP sing 27 n n C3' C2' AMP sing 28 n n C3' H3' AMP sing 29 n n O3' HO3' AMP sing 30 n n C2' O2' AMP sing 31 n n C2' C1' AMP sing 32 n n C2' H2' AMP sing 33 n n O2' HO2' AMP sing 34 n n C1' N9 AMP sing 35 n n C1' H1' AMP sing 36 n n N9 C8 AMP sing 37 n y N9 C4 AMP sing 38 n y C8 N7 AMP doub 39 n y C8 H8 AMP sing 40 n n N7 C5 AMP sing 41 n y C5 C6 AMP sing 42 n y C5 C4 AMP doub 43 n y C6 N6 AMP sing 44 n n C6 N1 AMP doub 45 n y N6 HN61 AMP sing 46 n n N6 HN62 AMP sing 47 n n N1 C2 AMP sing 48 n y C2 N3 AMP doub 49 n y C2 H2 AMP sing 50 n n N3 C4 AMP sing 51 n y # _atom_sites.entry_id 3AW8 _atom_sites.fract_transf_matrix[1][1] 0.012306 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012306 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AMP A 1 370 300 AMP AMP . D 3 CL A 1 371 1 CL CL . E 2 AMP B 1 370 300 AMP AMP . F 3 CL B 1 371 1 CL CL . G 3 CL B 1 372 1 CL CL . H 4 HOH A 1 372 1 HOH HOH . H 4 HOH A 2 373 2 HOH HOH . H 4 HOH A 3 374 4 HOH HOH . H 4 HOH A 4 375 6 HOH HOH . H 4 HOH A 5 376 7 HOH HOH . H 4 HOH A 6 377 10 HOH HOH . H 4 HOH A 7 378 12 HOH HOH . H 4 HOH A 8 379 17 HOH HOH . H 4 HOH A 9 380 21 HOH HOH . H 4 HOH A 10 381 22 HOH HOH . H 4 HOH A 11 382 25 HOH HOH . H 4 HOH A 12 383 29 HOH HOH . H 4 HOH A 13 384 33 HOH HOH . H 4 HOH A 14 385 35 HOH HOH . H 4 HOH A 15 386 47 HOH HOH . H 4 HOH A 16 387 50 HOH HOH . H 4 HOH A 17 388 56 HOH HOH . H 4 HOH A 18 389 57 HOH HOH . H 4 HOH A 19 390 58 HOH HOH . H 4 HOH A 20 391 59 HOH HOH . H 4 HOH A 21 392 60 HOH HOH . H 4 HOH A 22 393 61 HOH HOH . H 4 HOH A 23 394 67 HOH HOH . H 4 HOH A 24 395 68 HOH HOH . H 4 HOH A 25 396 70 HOH HOH . H 4 HOH A 26 397 71 HOH HOH . H 4 HOH A 27 398 72 HOH HOH . H 4 HOH A 28 399 78 HOH HOH . H 4 HOH A 29 400 80 HOH HOH . H 4 HOH A 30 401 83 HOH HOH . H 4 HOH A 31 402 88 HOH HOH . H 4 HOH A 32 403 90 HOH HOH . H 4 HOH A 33 404 95 HOH HOH . H 4 HOH A 34 405 99 HOH HOH . H 4 HOH A 35 406 105 HOH HOH . H 4 HOH A 36 407 109 HOH HOH . H 4 HOH A 37 408 112 HOH HOH . H 4 HOH A 38 409 113 HOH HOH . H 4 HOH A 39 410 115 HOH HOH . H 4 HOH A 40 411 119 HOH HOH . H 4 HOH A 41 412 121 HOH HOH . H 4 HOH A 42 413 128 HOH HOH . H 4 HOH A 43 414 129 HOH HOH . H 4 HOH A 44 415 130 HOH HOH . H 4 HOH A 45 416 133 HOH HOH . H 4 HOH A 46 417 139 HOH HOH . H 4 HOH A 47 418 145 HOH HOH . H 4 HOH A 48 419 153 HOH HOH . H 4 HOH A 49 420 155 HOH HOH . H 4 HOH A 50 421 156 HOH HOH . H 4 HOH A 51 422 157 HOH HOH . H 4 HOH A 52 423 160 HOH HOH . H 4 HOH A 53 424 161 HOH HOH . H 4 HOH A 54 425 162 HOH HOH . H 4 HOH A 55 426 163 HOH HOH . H 4 HOH A 56 427 165 HOH HOH . H 4 HOH A 57 428 166 HOH HOH . H 4 HOH A 58 429 167 HOH HOH . H 4 HOH A 59 430 171 HOH HOH . H 4 HOH A 60 431 176 HOH HOH . H 4 HOH A 61 432 178 HOH HOH . H 4 HOH A 62 433 183 HOH HOH . H 4 HOH A 63 434 193 HOH HOH . H 4 HOH A 64 435 198 HOH HOH . H 4 HOH A 65 436 201 HOH HOH . H 4 HOH A 66 437 202 HOH HOH . H 4 HOH A 67 438 203 HOH HOH . H 4 HOH A 68 439 204 HOH HOH . H 4 HOH A 69 440 206 HOH HOH . H 4 HOH A 70 441 207 HOH HOH . H 4 HOH A 71 442 208 HOH HOH . H 4 HOH A 72 443 209 HOH HOH . H 4 HOH A 73 444 212 HOH HOH . H 4 HOH A 74 445 213 HOH HOH . H 4 HOH A 75 446 215 HOH HOH . H 4 HOH A 76 447 221 HOH HOH . H 4 HOH A 77 448 222 HOH HOH . H 4 HOH A 78 449 223 HOH HOH . H 4 HOH A 79 450 230 HOH HOH . H 4 HOH A 80 451 231 HOH HOH . H 4 HOH A 81 452 237 HOH HOH . H 4 HOH A 82 453 250 HOH HOH . H 4 HOH A 83 454 261 HOH HOH . H 4 HOH A 84 455 263 HOH HOH . H 4 HOH A 85 456 267 HOH HOH . H 4 HOH A 86 457 270 HOH HOH . H 4 HOH A 87 458 273 HOH HOH . H 4 HOH A 88 459 276 HOH HOH . H 4 HOH A 89 460 279 HOH HOH . H 4 HOH A 90 461 281 HOH HOH . H 4 HOH A 91 462 282 HOH HOH . H 4 HOH A 92 463 283 HOH HOH . H 4 HOH A 93 464 284 HOH HOH . H 4 HOH A 94 465 285 HOH HOH . H 4 HOH A 95 466 286 HOH HOH . H 4 HOH A 96 467 288 HOH HOH . H 4 HOH A 97 468 292 HOH HOH . H 4 HOH A 98 469 293 HOH HOH . H 4 HOH A 99 470 296 HOH HOH . H 4 HOH A 100 471 298 HOH HOH . H 4 HOH A 101 472 302 HOH HOH . H 4 HOH A 102 473 306 HOH HOH . I 4 HOH B 1 373 3 HOH HOH . I 4 HOH B 2 374 8 HOH HOH . I 4 HOH B 3 375 9 HOH HOH . I 4 HOH B 4 376 11 HOH HOH . I 4 HOH B 5 377 13 HOH HOH . I 4 HOH B 6 378 14 HOH HOH . I 4 HOH B 7 379 16 HOH HOH . I 4 HOH B 8 380 18 HOH HOH . I 4 HOH B 9 381 19 HOH HOH . I 4 HOH B 10 382 23 HOH HOH . I 4 HOH B 11 383 24 HOH HOH . I 4 HOH B 12 384 26 HOH HOH . I 4 HOH B 13 385 30 HOH HOH . I 4 HOH B 14 386 34 HOH HOH . I 4 HOH B 15 387 36 HOH HOH . I 4 HOH B 16 388 38 HOH HOH . I 4 HOH B 17 389 39 HOH HOH . I 4 HOH B 18 390 40 HOH HOH . I 4 HOH B 19 391 41 HOH HOH . I 4 HOH B 20 392 44 HOH HOH . I 4 HOH B 21 393 45 HOH HOH . I 4 HOH B 22 394 48 HOH HOH . I 4 HOH B 23 395 51 HOH HOH . I 4 HOH B 24 396 53 HOH HOH . I 4 HOH B 25 397 54 HOH HOH . I 4 HOH B 26 398 55 HOH HOH . I 4 HOH B 27 399 63 HOH HOH . I 4 HOH B 28 400 65 HOH HOH . I 4 HOH B 29 401 66 HOH HOH . I 4 HOH B 30 402 69 HOH HOH . I 4 HOH B 31 403 74 HOH HOH . I 4 HOH B 32 404 76 HOH HOH . I 4 HOH B 33 405 77 HOH HOH . I 4 HOH B 34 406 79 HOH HOH . I 4 HOH B 35 407 81 HOH HOH . I 4 HOH B 36 408 82 HOH HOH . I 4 HOH B 37 409 84 HOH HOH . I 4 HOH B 38 410 86 HOH HOH . I 4 HOH B 39 411 87 HOH HOH . I 4 HOH B 40 412 89 HOH HOH . I 4 HOH B 41 413 91 HOH HOH . I 4 HOH B 42 414 92 HOH HOH . I 4 HOH B 43 415 98 HOH HOH . I 4 HOH B 44 416 101 HOH HOH . I 4 HOH B 45 417 104 HOH HOH . I 4 HOH B 46 418 106 HOH HOH . I 4 HOH B 47 419 107 HOH HOH . I 4 HOH B 48 420 108 HOH HOH . I 4 HOH B 49 421 110 HOH HOH . I 4 HOH B 50 422 116 HOH HOH . I 4 HOH B 51 423 117 HOH HOH . I 4 HOH B 52 424 118 HOH HOH . I 4 HOH B 53 425 120 HOH HOH . I 4 HOH B 54 426 123 HOH HOH . I 4 HOH B 55 427 126 HOH HOH . I 4 HOH B 56 428 127 HOH HOH . I 4 HOH B 57 429 136 HOH HOH . I 4 HOH B 58 430 138 HOH HOH . I 4 HOH B 59 431 140 HOH HOH . I 4 HOH B 60 432 146 HOH HOH . I 4 HOH B 61 433 147 HOH HOH . I 4 HOH B 62 434 149 HOH HOH . I 4 HOH B 63 435 150 HOH HOH . I 4 HOH B 64 436 151 HOH HOH . I 4 HOH B 65 437 154 HOH HOH . I 4 HOH B 66 438 164 HOH HOH . I 4 HOH B 67 439 170 HOH HOH . I 4 HOH B 68 440 172 HOH HOH . I 4 HOH B 69 441 173 HOH HOH . I 4 HOH B 70 442 174 HOH HOH . I 4 HOH B 71 443 199 HOH HOH . I 4 HOH B 72 444 200 HOH HOH . I 4 HOH B 73 445 211 HOH HOH . I 4 HOH B 74 446 216 HOH HOH . I 4 HOH B 75 447 217 HOH HOH . I 4 HOH B 76 448 218 HOH HOH . I 4 HOH B 77 449 219 HOH HOH . I 4 HOH B 78 450 220 HOH HOH . I 4 HOH B 79 451 225 HOH HOH . I 4 HOH B 80 452 226 HOH HOH . I 4 HOH B 81 453 227 HOH HOH . I 4 HOH B 82 454 228 HOH HOH . I 4 HOH B 83 455 233 HOH HOH . I 4 HOH B 84 456 234 HOH HOH . I 4 HOH B 85 457 235 HOH HOH . I 4 HOH B 86 458 241 HOH HOH . I 4 HOH B 87 459 247 HOH HOH . I 4 HOH B 88 460 248 HOH HOH . I 4 HOH B 89 461 249 HOH HOH . I 4 HOH B 90 462 253 HOH HOH . I 4 HOH B 91 463 254 HOH HOH . I 4 HOH B 92 464 266 HOH HOH . I 4 HOH B 93 465 269 HOH HOH . I 4 HOH B 94 466 272 HOH HOH . I 4 HOH B 95 467 275 HOH HOH . I 4 HOH B 96 468 277 HOH HOH . I 4 HOH B 97 469 278 HOH HOH . I 4 HOH B 98 470 280 HOH HOH . I 4 HOH B 99 471 287 HOH HOH . I 4 HOH B 100 472 289 HOH HOH . I 4 HOH B 101 473 290 HOH HOH . I 4 HOH B 102 474 291 HOH HOH . I 4 HOH B 103 475 294 HOH HOH . I 4 HOH B 104 476 295 HOH HOH . I 4 HOH B 105 477 297 HOH HOH . I 4 HOH B 106 478 299 HOH HOH . I 4 HOH B 107 479 300 HOH HOH . I 4 HOH B 108 480 303 HOH HOH . I 4 HOH B 109 481 304 HOH HOH . I 4 HOH B 110 482 307 HOH HOH . I 4 HOH B 111 483 308 HOH HOH . I 4 HOH B 112 484 309 HOH HOH . I 4 HOH B 113 485 310 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P AMP . . . C 2 25.716 15.569 -30.597 1 132.2 ? P AMP 370 A 1 HETATM 2 O O1P AMP . . . C 2 25.757 15.786 -29.126 1 131.72 ? O1P AMP 370 A 1 HETATM 3 O O2P AMP . . . C 2 27.209 15.7 -31.203 1 131.72 ? O2P AMP 370 A 1 HETATM 4 O O3P AMP . . . C 2 24.758 16.672 -31.274 1 131.3 ? O3P AMP 370 A 1 HETATM 5 O O5' AMP . . . C 2 25.12 14.091 -30.92 1 130.07 ? O5' AMP 370 A 1 HETATM 6 C C5' AMP . . . C 2 26.001 13.105 -30.35 1 126.64 ? C5' AMP 370 A 1 HETATM 7 C C4' AMP . . . C 2 25.624 11.706 -30.876 1 123.96 ? C4' AMP 370 A 1 HETATM 8 O O4' AMP . . . C 2 25.851 11.598 -32.32 1 121.96 ? O4' AMP 370 A 1 HETATM 9 C C3' AMP . . . C 2 26.459 10.602 -30.202 1 122.57 ? C3' AMP 370 A 1 HETATM 10 O O3' AMP . . . C 2 25.633 9.474 -29.885 1 122.87 ? O3' AMP 370 A 1 HETATM 11 C C2' AMP . . . C 2 27.557 10.26 -31.219 1 120.93 ? C2' AMP 370 A 1 HETATM 12 O O2' AMP . . . C 2 27.863 8.859 -31.199 1 120.03 ? O2' AMP 370 A 1 HETATM 13 C C1' AMP . . . C 2 26.997 10.72 -32.584 1 119.12 ? C1' AMP 370 A 1 HETATM 14 N N9 AMP . . . C 2 28.036 11.441 -33.361 1 115.57 ? N9 AMP 370 A 1 HETATM 15 C C8 AMP . . . C 2 28.284 12.791 -33.345 1 114.82 ? C8 AMP 370 A 1 HETATM 16 N N7 AMP . . . C 2 29.266 13.085 -34.147 1 113.54 ? N7 AMP 370 A 1 HETATM 17 C C5 AMP . . . C 2 29.717 11.958 -34.733 1 112.76 ? C5 AMP 370 A 1 HETATM 18 C C6 AMP . . . C 2 30.739 11.654 -35.673 1 112.06 ? C6 AMP 370 A 1 HETATM 19 N N6 AMP . . . C 2 31.537 12.658 -36.195 1 111.44 ? N6 AMP 370 A 1 HETATM 20 N N1 AMP . . . C 2 30.917 10.366 -36.048 1 111.57 ? N1 AMP 370 A 1 HETATM 21 C C2 AMP . . . C 2 30.155 9.379 -35.555 1 111.66 ? C2 AMP 370 A 1 HETATM 22 N N3 AMP . . . C 2 29.184 9.624 -34.67 1 112.13 ? N3 AMP 370 A 1 HETATM 23 C C4 AMP . . . C 2 28.933 10.879 -34.236 1 113.44 ? C4 AMP 370 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #