data_3AX8 # _model_server_result.job_id BQcq7tB46Bb1p2wCcGucfQ _model_server_result.datetime_utc '2024-11-22 07:54:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ax8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3AX8 # _exptl.entry_id 3AX8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 446.662 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1R,3S,5Z)-5-[(2E)-2-[(1R,3S,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-3-methoxy-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AX8 _cell.length_a 44.489 _cell.length_b 51.585 _cell.length_c 132.017 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AX8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H46 O4' _chem_comp.formula_weight 446.662 _chem_comp.id EIM _chem_comp.mon_nstd_flag . _chem_comp.name (1R,3S,5Z)-5-[(2E)-2-[(1R,3S,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-3-methoxy-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 EIM sing 83 n n C1 C6 EIM sing 84 n n C2 C3 EIM sing 85 n n C3 C4 EIM sing 86 n n C4 C5 EIM sing 87 n n C4 C10 EIM doub 88 n n C5 C6 EIM sing 89 n n C5 C7 EIM sing 90 n n C6 C9 EIM sing 91 n n C6 C20 EIM sing 92 n n C7 C8 EIM sing 93 n n C7 O31 EIM sing 94 e n C8 C9 EIM sing 95 n n C9 C19 EIM sing 96 n n C10 C11 EIM sing 97 n n C11 C12 EIM doub 98 n n C12 C13 EIM sing 99 n n C12 C17 EIM sing 100 n n C13 C14 EIM sing 101 n n C14 C15 EIM sing 102 n n C14 O22 EIM sing 103 n n C15 C16 EIM sing 104 n n C16 C17 EIM sing 105 n n C16 O21 EIM sing 106 n n C17 C18 EIM doub 107 n n C19 C23 EIM sing 108 n n C19 C24 EIM sing 109 n n C24 C25 EIM sing 110 z n C25 C26 EIM sing 111 n n C26 C27 EIM sing 112 n n C27 C28 EIM sing 113 n n C27 C29 EIM sing 114 n n C27 O30 EIM sing 115 n n O31 C33 EIM sing 116 n n C1 H1 EIM sing 117 n n C1 H1A EIM sing 118 n n C2 H2 EIM sing 119 n n C2 H2A EIM sing 120 n n C3 H3 EIM sing 121 n n C3 H3A EIM sing 122 n n C5 H5 EIM sing 123 n n C7 H7 EIM sing 124 n n C8 H8 EIM sing 125 n n C8 H8A EIM sing 126 n n C9 H9 EIM sing 127 n n C10 H10 EIM sing 128 n n C11 H11 EIM sing 129 n n C13 H13 EIM sing 130 n n C13 H13A EIM sing 131 n n C14 H14 EIM sing 132 n n C15 H15 EIM sing 133 n n C15 H15A EIM sing 134 n n C16 H16 EIM sing 135 n n C18 H18 EIM sing 136 n n C18 H18A EIM sing 137 n n C19 H19 EIM sing 138 n n C20 H20 EIM sing 139 n n C20 H20A EIM sing 140 n n C20 H20B EIM sing 141 n n O21 HO21 EIM sing 142 n n O22 HO22 EIM sing 143 n n C23 H23 EIM sing 144 n n C23 H23A EIM sing 145 n n C23 H23B EIM sing 146 n n C24 H24 EIM sing 147 n n C24 H24A EIM sing 148 n n C25 H25 EIM sing 149 n n C25 H25A EIM sing 150 n n C26 H26 EIM sing 151 n n C26 H26A EIM sing 152 n n C28 H28 EIM sing 153 n n C28 H28A EIM sing 154 n n C28 H28B EIM sing 155 n n C29 H29 EIM sing 156 n n C29 H29A EIM sing 157 n n C29 H29B EIM sing 158 n n O30 HO30 EIM sing 159 n n C33 H33 EIM sing 160 n n C33 H33A EIM sing 161 n n C33 H33B EIM sing 162 n n # _atom_sites.entry_id 3AX8 _atom_sites.fract_transf_matrix[1][1] 0.022477 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019385 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EIM A 1 1 1 EIM MOL . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 4 4 HOH HOH . C 3 HOH A 4 5 5 HOH HOH . C 3 HOH A 5 6 6 HOH HOH . C 3 HOH A 6 7 7 HOH HOH . C 3 HOH A 7 8 8 HOH HOH . C 3 HOH A 8 9 9 HOH HOH . C 3 HOH A 9 428 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EIM . . . B 2 11.733 -0.972 -33.891 1 4.94 ? C1 EIM 1 A 1 HETATM 2 C C2 EIM . . . B 2 12.749 -1.883 -34.641 1 2.12 ? C2 EIM 1 A 1 HETATM 3 C C3 EIM . . . B 2 13.957 -2.349 -33.792 1 3.45 ? C3 EIM 1 A 1 HETATM 4 C C4 EIM . . . B 2 13.513 -2.797 -32.415 1 4.44 ? C4 EIM 1 A 1 HETATM 5 C C5 EIM . . . B 2 12.713 -1.704 -31.771 1 4.46 ? C5 EIM 1 A 1 HETATM 6 C C6 EIM . . . B 2 11.37 -1.485 -32.499 1 5.56 ? C6 EIM 1 A 1 HETATM 7 C C7 EIM . . . B 2 12.341 -1.466 -30.333 1 4.77 ? C7 EIM 1 A 1 HETATM 8 C C8 EIM . . . B 2 10.848 -1.274 -30.153 1 5.59 ? C8 EIM 1 A 1 HETATM 9 C C9 EIM . . . B 2 10.691 -0.508 -31.507 1 5.74 ? C9 EIM 1 A 1 HETATM 10 C C10 EIM . . . B 2 13.76 -4.023 -31.894 1 5.86 ? C10 EIM 1 A 1 HETATM 11 C C11 EIM . . . B 2 14.522 -5.057 -32.607 1 6.23 ? C11 EIM 1 A 1 HETATM 12 C C12 EIM . . . B 2 14.409 -6.389 -32.377 1 6.35 ? C12 EIM 1 A 1 HETATM 13 C C13 EIM . . . B 2 15.253 -7.345 -33.202 1 5.77 ? C13 EIM 1 A 1 HETATM 14 C C14 EIM . . . B 2 15.866 -8.461 -32.335 1 7.65 ? C14 EIM 1 A 1 HETATM 15 C C15 EIM . . . B 2 14.824 -9.102 -31.42 1 5.16 ? C15 EIM 1 A 1 HETATM 16 C C16 EIM . . . B 2 14.087 -8.104 -30.541 1 4.62 ? C16 EIM 1 A 1 HETATM 17 C C17 EIM . . . B 2 13.527 -6.974 -31.361 1 5.02 ? C17 EIM 1 A 1 HETATM 18 C C18 EIM . . . B 2 12.28 -6.543 -31.186 1 5.02 ? C18 EIM 1 A 1 HETATM 19 C C19 EIM . . . B 2 9.337 0.124 -31.928 1 7.99 ? C19 EIM 1 A 1 HETATM 20 C C20 EIM . . . B 2 10.534 -2.795 -32.623 1 3.94 ? C20 EIM 1 A 1 HETATM 21 O O21 EIM . . . B 2 13.037 -8.827 -29.896 1 6.22 ? O21 EIM 1 A 1 HETATM 22 O O22 EIM . . . B 2 16.97 -7.967 -31.542 1 7.65 ? O22 EIM 1 A 1 HETATM 23 C C23 EIM . . . B 2 9.221 1.587 -31.462 1 9.44 ? C23 EIM 1 A 1 HETATM 24 C C24 EIM . . . B 2 8.088 -0.627 -31.469 1 7.95 ? C24 EIM 1 A 1 HETATM 25 C C25 EIM . . . B 2 6.826 -0.14 -32.191 1 6.93 ? C25 EIM 1 A 1 HETATM 26 C C26 EIM . . . B 2 5.671 -1.011 -31.7 1 6.45 ? C26 EIM 1 A 1 HETATM 27 C C27 EIM . . . B 2 4.275 -0.501 -32.022 1 7.53 ? C27 EIM 1 A 1 HETATM 28 C C28 EIM . . . B 2 4.03 -0.336 -33.505 1 5.4 ? C28 EIM 1 A 1 HETATM 29 C C29 EIM . . . B 2 3.288 -1.511 -31.462 1 7.73 ? C29 EIM 1 A 1 HETATM 30 O O30 EIM . . . B 2 4.037 0.764 -31.381 1 7.52 ? O30 EIM 1 A 1 HETATM 31 O O31 EIM . . . B 2 13.248 -1.069 -29.33 1 6.58 ? O31 EIM 1 A 1 HETATM 32 C C33 EIM . . . B 2 14.534 -1.601 -29.556 1 6.38 ? C33 EIM 1 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 32 #