data_3AYM
#
_model_server_result.job_id            x7QyiMDHJTiMQk6HWvOLWw 
_model_server_result.datetime_utc      '2024-11-23 11:09:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3aym 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1001}' 
#
_entry.id    3AYM 
#
_exptl.entry_id    3AYM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              256.424 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3AYM 
_cell.length_a            122.36 
_cell.length_b            122.36 
_cell.length_c            158.22 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3AYM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        171 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 62' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,J 1 1 
B,F,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 108 A CYS 108 1_555 A SG CYS 186 A CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf2 B SG CYS 108 B CYS 108 1_555 B SG CYS 186 B CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
covale ? covale1 A NZ LYS 305 A LYS 305 1_555 E C15 RET . A RET 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.271 ? 
covale ? covale2 B NZ LYS 305 B LYS 305 1_555 I C15 RET . B RET 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.285 ? 
#
_chem_comp.formula           'C16 H32 O2' 
_chem_comp.formula_weight    256.424 
_chem_comp.id                PLM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PLM sing 449 n n 
C1 O2 PLM doub 450 n n 
C1 C2 PLM sing 451 n n 
O1 H PLM sing 452 n n 
C2 C3 PLM sing 453 n n 
C2 H21 PLM sing 454 n n 
C2 H22 PLM sing 455 n n 
C3 C4 PLM sing 456 n n 
C3 H31 PLM sing 457 n n 
C3 H32 PLM sing 458 n n 
C4 C5 PLM sing 459 n n 
C4 H41 PLM sing 460 n n 
C4 H42 PLM sing 461 n n 
C5 C6 PLM sing 462 n n 
C5 H51 PLM sing 463 n n 
C5 H52 PLM sing 464 n n 
C6 C7 PLM sing 465 n n 
C6 H61 PLM sing 466 n n 
C6 H62 PLM sing 467 n n 
C7 C8 PLM sing 468 n n 
C7 H71 PLM sing 469 n n 
C7 H72 PLM sing 470 n n 
C8 C9 PLM sing 471 n n 
C8 H81 PLM sing 472 n n 
C8 H82 PLM sing 473 n n 
C9 CA PLM sing 474 n n 
C9 H91 PLM sing 475 n n 
C9 H92 PLM sing 476 n n 
CA CB PLM sing 477 n n 
CA HA1 PLM sing 478 n n 
CA HA2 PLM sing 479 n n 
CB CC PLM sing 480 n n 
CB HB1 PLM sing 481 n n 
CB HB2 PLM sing 482 n n 
CC CD PLM sing 483 n n 
CC HC1 PLM sing 484 n n 
CC HC2 PLM sing 485 n n 
CD CE PLM sing 486 n n 
CD HD1 PLM sing 487 n n 
CD HD2 PLM sing 488 n n 
CE CF PLM sing 489 n n 
CE HE1 PLM sing 490 n n 
CE HE2 PLM sing 491 n n 
CF CG PLM sing 492 n n 
CF HF1 PLM sing 493 n n 
CF HF2 PLM sing 494 n n 
CG HG1 PLM sing 495 n n 
CG HG2 PLM sing 496 n n 
CG HG3 PLM sing 497 n n 
#
_atom_sites.entry_id                     3AYM 
_atom_sites.fract_transf_matrix[1][1]    0.008173 
_atom_sites.fract_transf_matrix[1][2]    0.004718 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009437 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00632 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PLM A 1 1001 1001 PLM PLM . 
D 3 BOG A 1 1005 1005 BOG BOG . 
E 4 RET A 1 1000 1000 RET RET . 
F 5 SO4 B 1 449 449 SO4 SO4 . 
G 6 PC1 B 1 1004 1004 PC1 PC1 . 
H 3 BOG B 1 1005 1005 BOG BOG . 
I 4 RET B 1 1000 1000 RET RET . 
J 7 HOH A 1 500 500 HOH HOH . 
J 7 HOH A 2 501 501 HOH HOH . 
J 7 HOH A 3 502 502 HOH HOH . 
J 7 HOH A 4 503 503 HOH HOH . 
J 7 HOH A 5 504 504 HOH HOH . 
J 7 HOH A 6 505 505 HOH HOH . 
J 7 HOH A 7 506 506 HOH HOH . 
J 7 HOH A 8 507 507 HOH HOH . 
J 7 HOH A 9 508 508 HOH HOH . 
J 7 HOH A 10 509 509 HOH HOH . 
J 7 HOH A 11 510 510 HOH HOH . 
J 7 HOH A 12 511 511 HOH HOH . 
J 7 HOH A 13 512 512 HOH HOH . 
J 7 HOH A 14 513 513 HOH HOH . 
J 7 HOH A 15 514 514 HOH HOH . 
J 7 HOH A 16 515 515 HOH HOH . 
J 7 HOH A 17 516 516 HOH HOH . 
J 7 HOH A 18 517 517 HOH HOH . 
J 7 HOH A 19 518 518 HOH HOH . 
J 7 HOH A 20 519 519 HOH HOH . 
J 7 HOH A 21 520 520 HOH HOH . 
J 7 HOH A 22 521 521 HOH HOH . 
J 7 HOH A 23 522 522 HOH HOH . 
J 7 HOH A 24 523 523 HOH HOH . 
J 7 HOH A 25 524 524 HOH HOH . 
J 7 HOH A 26 525 525 HOH HOH . 
J 7 HOH A 27 526 526 HOH HOH . 
J 7 HOH A 28 527 527 HOH HOH . 
J 7 HOH A 29 529 529 HOH HOH . 
K 7 HOH B 1 500 500 HOH HOH . 
K 7 HOH B 2 501 501 HOH HOH . 
K 7 HOH B 3 502 502 HOH HOH . 
K 7 HOH B 4 503 503 HOH HOH . 
K 7 HOH B 5 504 504 HOH HOH . 
K 7 HOH B 6 505 505 HOH HOH . 
K 7 HOH B 7 506 506 HOH HOH . 
K 7 HOH B 8 507 507 HOH HOH . 
K 7 HOH B 9 508 508 HOH HOH . 
K 7 HOH B 10 509 509 HOH HOH . 
K 7 HOH B 11 510 510 HOH HOH . 
K 7 HOH B 12 511 511 HOH HOH . 
K 7 HOH B 13 512 512 HOH HOH . 
K 7 HOH B 14 513 513 HOH HOH . 
K 7 HOH B 15 514 514 HOH HOH . 
K 7 HOH B 16 515 515 HOH HOH . 
K 7 HOH B 17 516 516 HOH HOH . 
K 7 HOH B 18 517 517 HOH HOH . 
K 7 HOH B 19 518 518 HOH HOH . 
K 7 HOH B 20 519 519 HOH HOH . 
K 7 HOH B 21 520 520 HOH HOH . 
K 7 HOH B 22 521 521 HOH HOH . 
K 7 HOH B 23 522 522 HOH HOH . 
K 7 HOH B 24 523 523 HOH HOH . 
K 7 HOH B 25 524 524 HOH HOH . 
K 7 HOH B 26 525 525 HOH HOH . 
K 7 HOH B 27 526 526 HOH HOH . 
K 7 HOH B 28 527 527 HOH HOH . 
K 7 HOH B 29 528 528 HOH HOH . 
K 7 HOH B 30 529 529 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLM . . . C 2 -6.22 45.508 80.422 1 48.52 ? C1 PLM 1001 A 1 
HETATM 2 O O2 PLM . . . C 2 -7.269 44.906 80.438 1 45.17 ? O2 PLM 1001 A 1 
HETATM 3 C C2 PLM . . . C 2 -4.95 44.728 80.143 1 51.8 ? C2 PLM 1001 A 1 
HETATM 4 C C3 PLM . . . C 2 -4.283 45.107 78.816 1 58.34 ? C3 PLM 1001 A 1 
HETATM 5 C C4 PLM . . . C 2 -4.138 43.888 77.912 1 62.26 ? C4 PLM 1001 A 1 
HETATM 6 C C5 PLM . . . C 2 -3.253 44.179 76.724 1 65.92 ? C5 PLM 1001 A 1 
HETATM 7 C C6 PLM . . . C 2 -3.145 42.933 75.854 1 67.4 ? C6 PLM 1001 A 1 
HETATM 8 C C7 PLM . . . C 2 -2.765 43.282 74.416 1 66.82 ? C7 PLM 1001 A 1 
HETATM 9 C C8 PLM . . . C 2 -2.668 42.021 73.531 1 65.99 ? C8 PLM 1001 A 1 
HETATM 10 C C9 PLM . . . C 2 -1.919 42.277 72.222 1 70.13 ? C9 PLM 1001 A 1 
HETATM 11 C CA PLM . . . C 2 -2.808 42.787 71.098 1 69.98 ? CA PLM 1001 A 1 
HETATM 12 C CB PLM . . . C 2 -1.973 43.618 70.131 1 72.27 ? CB PLM 1001 A 1 
HETATM 13 C CC PLM . . . C 2 -2.642 43.755 68.77 1 73.7 ? CC PLM 1001 A 1 
HETATM 14 C CD PLM . . . C 2 -1.774 44.6 67.83 1 74.8 ? CD PLM 1001 A 1 
HETATM 15 C CE PLM . . . C 2 -1.68 43.96 66.443 1 71.57 ? CE PLM 1001 A 1 
HETATM 16 C CF PLM . . . C 2 -2.371 44.807 65.36 1 69.92 ? CF PLM 1001 A 1 
HETATM 17 C CG PLM . . . C 2 -2.268 44.159 63.971 1 68.01 ? CG PLM 1001 A 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           17 
#