data_3AZ4 # _model_server_result.job_id LIR00Qcp072fsXUcZirOYw _model_server_result.datetime_utc '2024-11-25 15:39:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3az4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":130}' # _entry.id 3AZ4 # _exptl.entry_id 3AZ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3AZ4 _cell.length_a 30.154 _cell.length_b 55.473 _cell.length_c 71.928 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AZ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc1 A OD2 ASP 52 A ASP 52 1_555 B CO CO . A CO 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc2 B CO CO . A CO 130 1_555 G O HOH . A HOH 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc3 B CO CO . A CO 130 1_555 G O HOH . A HOH 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc4 B CO CO . A CO 130 1_555 G O HOH . A HOH 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3AZ4 _atom_sites.fract_transf_matrix[1][1] 0.033163 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018027 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013903 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 130 130 CO CO . C 3 CL A 1 131 131 CL CL . D 3 CL A 1 132 132 CL CL . E 3 CL A 1 133 133 CL CL . F 3 CL A 1 134 134 CL CL . G 4 HOH A 1 135 135 HOH HOH . G 4 HOH A 2 136 136 HOH HOH . G 4 HOH A 3 137 137 HOH HOH . G 4 HOH A 4 138 138 HOH HOH . G 4 HOH A 5 139 139 HOH HOH . G 4 HOH A 6 140 140 HOH HOH . G 4 HOH A 7 141 141 HOH HOH . G 4 HOH A 8 142 142 HOH HOH . G 4 HOH A 9 143 143 HOH HOH . G 4 HOH A 10 144 144 HOH HOH . G 4 HOH A 11 145 145 HOH HOH . G 4 HOH A 12 146 146 HOH HOH . G 4 HOH A 13 147 147 HOH HOH . G 4 HOH A 14 148 148 HOH HOH . G 4 HOH A 15 149 149 HOH HOH . G 4 HOH A 16 150 150 HOH HOH . G 4 HOH A 17 151 151 HOH HOH . G 4 HOH A 18 152 152 HOH HOH . G 4 HOH A 19 153 153 HOH HOH . G 4 HOH A 20 154 154 HOH HOH . G 4 HOH A 21 155 155 HOH HOH . G 4 HOH A 22 156 156 HOH HOH . G 4 HOH A 23 157 157 HOH HOH . G 4 HOH A 24 158 158 HOH HOH . G 4 HOH A 25 159 159 HOH HOH . G 4 HOH A 26 160 160 HOH HOH . G 4 HOH A 27 161 161 HOH HOH . G 4 HOH A 28 162 162 HOH HOH . G 4 HOH A 29 163 163 HOH HOH . G 4 HOH A 30 164 164 HOH HOH . G 4 HOH A 31 165 165 HOH HOH . G 4 HOH A 32 166 166 HOH HOH . G 4 HOH A 33 167 167 HOH HOH . G 4 HOH A 34 168 168 HOH HOH . G 4 HOH A 35 169 169 HOH HOH . G 4 HOH A 36 170 170 HOH HOH . G 4 HOH A 37 171 171 HOH HOH . G 4 HOH A 38 172 172 HOH HOH . G 4 HOH A 39 173 173 HOH HOH . G 4 HOH A 40 174 174 HOH HOH . G 4 HOH A 41 175 175 HOH HOH . G 4 HOH A 42 176 176 HOH HOH . G 4 HOH A 43 177 177 HOH HOH . G 4 HOH A 44 178 178 HOH HOH . G 4 HOH A 45 179 179 HOH HOH . G 4 HOH A 46 180 180 HOH HOH . G 4 HOH A 47 181 181 HOH HOH . G 4 HOH A 48 182 182 HOH HOH . G 4 HOH A 49 183 183 HOH HOH . G 4 HOH A 50 184 184 HOH HOH . G 4 HOH A 51 185 185 HOH HOH . G 4 HOH A 52 186 186 HOH HOH . G 4 HOH A 53 187 187 HOH HOH . G 4 HOH A 54 188 188 HOH HOH . G 4 HOH A 55 189 189 HOH HOH . G 4 HOH A 56 190 190 HOH HOH . G 4 HOH A 57 191 191 HOH HOH . G 4 HOH A 58 192 192 HOH HOH . G 4 HOH A 59 193 193 HOH HOH . G 4 HOH A 60 194 194 HOH HOH . G 4 HOH A 61 195 195 HOH HOH . G 4 HOH A 62 196 196 HOH HOH . G 4 HOH A 63 197 197 HOH HOH . G 4 HOH A 64 198 198 HOH HOH . G 4 HOH A 65 199 199 HOH HOH . G 4 HOH A 66 200 200 HOH HOH . G 4 HOH A 67 201 201 HOH HOH . G 4 HOH A 68 202 202 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 1.16 _atom_site.Cartn_y -11.19 _atom_site.Cartn_z -7.804 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 130 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 80 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #