data_3B0C # _model_server_result.job_id KL5h6Tfxubce0zP9hbgQXQ _model_server_result.datetime_utc '2025-06-30 15:48:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b0c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":111}' # _entry.id 3B0C # _exptl.entry_id 3B0C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3B0C _cell.length_a 54.933 _cell.length_b 54.933 _cell.length_c 122.463 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B0C _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 3B0C _atom_sites.fract_transf_matrix[1][1] 0.018204 _atom_sites.fract_transf_matrix[1][2] 0.01051 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02102 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008166 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CIT T 1 110 2 CIT CIT . D 3 CIT T 1 111 3 CIT CIT . E 3 CIT W 1 77 1 CIT CIT . F 4 HOH T 1 112 4 HOH HOH . F 4 HOH T 2 113 5 HOH HOH . F 4 HOH T 3 114 9 HOH HOH . F 4 HOH T 4 115 10 HOH HOH . F 4 HOH T 5 116 11 HOH HOH . F 4 HOH T 6 117 13 HOH HOH . F 4 HOH T 7 118 14 HOH HOH . F 4 HOH T 8 119 15 HOH HOH . F 4 HOH T 9 120 16 HOH HOH . F 4 HOH T 10 121 17 HOH HOH . F 4 HOH T 11 122 18 HOH HOH . F 4 HOH T 12 123 19 HOH HOH . F 4 HOH T 13 124 21 HOH HOH . F 4 HOH T 14 125 22 HOH HOH . F 4 HOH T 15 126 23 HOH HOH . F 4 HOH T 16 127 24 HOH HOH . F 4 HOH T 17 128 26 HOH HOH . F 4 HOH T 18 129 27 HOH HOH . F 4 HOH T 19 130 31 HOH HOH . F 4 HOH T 20 131 34 HOH HOH . F 4 HOH T 21 132 35 HOH HOH . F 4 HOH T 22 133 36 HOH HOH . F 4 HOH T 23 134 37 HOH HOH . F 4 HOH T 24 135 38 HOH HOH . F 4 HOH T 25 136 39 HOH HOH . F 4 HOH T 26 137 40 HOH HOH . F 4 HOH T 27 138 45 HOH HOH . F 4 HOH T 28 139 46 HOH HOH . F 4 HOH T 29 140 47 HOH HOH . F 4 HOH T 30 141 48 HOH HOH . F 4 HOH T 31 142 49 HOH HOH . F 4 HOH T 32 143 50 HOH HOH . G 4 HOH W 1 78 1 HOH HOH . G 4 HOH W 2 79 2 HOH HOH . G 4 HOH W 3 80 3 HOH HOH . G 4 HOH W 4 81 6 HOH HOH . G 4 HOH W 5 82 7 HOH HOH . G 4 HOH W 6 83 8 HOH HOH . G 4 HOH W 7 84 12 HOH HOH . G 4 HOH W 8 85 20 HOH HOH . G 4 HOH W 9 86 25 HOH HOH . G 4 HOH W 10 88 29 HOH HOH . G 4 HOH W 11 89 30 HOH HOH . G 4 HOH W 12 90 32 HOH HOH . G 4 HOH W 13 91 33 HOH HOH . G 4 HOH W 14 92 41 HOH HOH . G 4 HOH W 15 93 42 HOH HOH . G 4 HOH W 16 94 43 HOH HOH . G 4 HOH W 17 95 44 HOH HOH . G 4 HOH W 18 96 51 HOH HOH . G 4 HOH W 19 97 52 HOH HOH . G 4 HOH W 20 98 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . D 3 -14.508 -26.699 -7.631 1 87.58 ? C1 CIT 111 T 1 HETATM 2 O O1 CIT . . . D 3 -14.255 -26.729 -8.857 1 86.81 ? O1 CIT 111 T 1 HETATM 3 O O2 CIT . . . D 3 -13.551 -26.651 -6.819 1 86.21 ? O2 CIT 111 T 1 HETATM 4 C C2 CIT . . . D 3 -15.954 -26.711 -7.176 1 88.07 ? C2 CIT 111 T 1 HETATM 5 C C3 CIT . . . D 3 -16.105 -26.687 -5.656 1 92.53 ? C3 CIT 111 T 1 HETATM 6 O O7 CIT . . . D 3 -17.506 -26.433 -5.358 1 97.82 ? O7 CIT 111 T 1 HETATM 7 C C4 CIT . . . D 3 -15.255 -25.609 -4.995 1 87.86 ? C4 CIT 111 T 1 HETATM 8 C C5 CIT . . . D 3 -16.088 -24.96 -3.917 1 81.75 ? C5 CIT 111 T 1 HETATM 9 O O3 CIT . . . D 3 -17.179 -25.47 -3.575 1 79.4 ? O3 CIT 111 T 1 HETATM 10 O O4 CIT . . . D 3 -15.692 -23.916 -3.357 1 78.62 ? O4 CIT 111 T 1 HETATM 11 C C6 CIT . . . D 3 -15.706 -28.026 -5.055 1 94.21 ? C6 CIT 111 T 1 HETATM 12 O O5 CIT . . . D 3 -16.097 -29.094 -5.573 1 96.81 ? O5 CIT 111 T 1 HETATM 13 O O6 CIT . . . D 3 -14.98 -28.062 -4.034 1 92.08 ? O6 CIT 111 T 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #