data_3B0D # _model_server_result.job_id eIOkwM8Qi2jgaq-hlfq6KQ _model_server_result.datetime_utc '2025-06-30 10:41:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b0d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1}' # _entry.id 3B0D # _exptl.entry_id 3B0D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3B0D _cell.length_a 54.985 _cell.length_b 54.985 _cell.length_c 235.912 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B0D _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 3B0D _atom_sites.fract_transf_matrix[1][1] 0.018187 _atom_sites.fract_transf_matrix[1][2] 0.0105 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004239 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CIT T 1 2 2 CIT CIT . F 3 CIT W 1 77 3 CIT CIT . G 3 CIT B 1 1 1 CIT CIT . H 3 CIT C 1 77 4 CIT CIT . I 4 HOH T 1 4 4 HOH HOH . I 4 HOH T 2 10 10 HOH HOH . I 4 HOH T 3 12 12 HOH HOH . I 4 HOH T 4 13 13 HOH HOH . I 4 HOH T 5 17 17 HOH HOH . I 4 HOH T 6 19 19 HOH HOH . I 4 HOH T 7 22 22 HOH HOH . I 4 HOH T 8 24 24 HOH HOH . I 4 HOH T 9 25 25 HOH HOH . I 4 HOH T 10 32 32 HOH HOH . I 4 HOH T 11 35 35 HOH HOH . I 4 HOH T 12 37 37 HOH HOH . I 4 HOH T 13 38 38 HOH HOH . I 4 HOH T 14 41 41 HOH HOH . I 4 HOH T 15 42 42 HOH HOH . I 4 HOH T 16 68 68 HOH HOH . I 4 HOH T 17 69 69 HOH HOH . I 4 HOH T 18 70 70 HOH HOH . I 4 HOH T 19 84 84 HOH HOH . I 4 HOH T 20 85 85 HOH HOH . I 4 HOH T 21 86 86 HOH HOH . I 4 HOH T 22 88 88 HOH HOH . I 4 HOH T 23 89 89 HOH HOH . I 4 HOH T 24 103 103 HOH HOH . I 4 HOH T 25 104 104 HOH HOH . I 4 HOH T 26 107 107 HOH HOH . I 4 HOH T 27 116 116 HOH HOH . I 4 HOH T 28 117 117 HOH HOH . I 4 HOH T 29 118 118 HOH HOH . I 4 HOH T 30 121 121 HOH HOH . J 4 HOH W 1 78 2 HOH HOH . J 4 HOH W 2 79 3 HOH HOH . J 4 HOH W 3 80 7 HOH HOH . J 4 HOH W 4 81 21 HOH HOH . J 4 HOH W 5 82 27 HOH HOH . J 4 HOH W 6 83 28 HOH HOH . J 4 HOH W 7 84 30 HOH HOH . J 4 HOH W 8 85 47 HOH HOH . J 4 HOH W 9 86 51 HOH HOH . J 4 HOH W 10 87 87 HOH HOH . J 4 HOH W 11 88 55 HOH HOH . J 4 HOH W 12 89 57 HOH HOH . J 4 HOH W 13 90 90 HOH HOH . J 4 HOH W 14 91 91 HOH HOH . J 4 HOH W 15 92 92 HOH HOH . J 4 HOH W 16 93 93 HOH HOH . J 4 HOH W 17 94 94 HOH HOH . J 4 HOH W 18 95 58 HOH HOH . J 4 HOH W 19 96 64 HOH HOH . J 4 HOH W 20 97 66 HOH HOH . J 4 HOH W 21 98 71 HOH HOH . J 4 HOH W 22 99 76 HOH HOH . J 4 HOH W 23 108 108 HOH HOH . J 4 HOH W 24 109 109 HOH HOH . J 4 HOH W 25 119 119 HOH HOH . K 4 HOH B 1 5 5 HOH HOH . K 4 HOH B 2 6 6 HOH HOH . K 4 HOH B 3 11 11 HOH HOH . K 4 HOH B 4 23 23 HOH HOH . K 4 HOH B 5 26 26 HOH HOH . K 4 HOH B 6 29 29 HOH HOH . K 4 HOH B 7 33 33 HOH HOH . K 4 HOH B 8 40 40 HOH HOH . K 4 HOH B 9 43 43 HOH HOH . K 4 HOH B 10 44 44 HOH HOH . K 4 HOH B 11 48 48 HOH HOH . K 4 HOH B 12 50 50 HOH HOH . K 4 HOH B 13 52 52 HOH HOH . K 4 HOH B 14 56 56 HOH HOH . K 4 HOH B 15 59 59 HOH HOH . K 4 HOH B 16 62 62 HOH HOH . K 4 HOH B 17 63 63 HOH HOH . K 4 HOH B 18 67 67 HOH HOH . K 4 HOH B 19 72 72 HOH HOH . K 4 HOH B 20 73 73 HOH HOH . K 4 HOH B 21 74 74 HOH HOH . K 4 HOH B 22 80 80 HOH HOH . K 4 HOH B 23 81 81 HOH HOH . K 4 HOH B 24 82 82 HOH HOH . K 4 HOH B 25 96 96 HOH HOH . K 4 HOH B 26 97 97 HOH HOH . K 4 HOH B 27 98 98 HOH HOH . K 4 HOH B 28 99 99 HOH HOH . K 4 HOH B 29 101 101 HOH HOH . K 4 HOH B 30 105 105 HOH HOH . K 4 HOH B 31 106 106 HOH HOH . K 4 HOH B 32 112 112 HOH HOH . K 4 HOH B 33 114 114 HOH HOH . K 4 HOH B 34 115 115 HOH HOH . K 4 HOH B 35 120 120 HOH HOH . K 4 HOH B 36 124 124 HOH HOH . L 4 HOH C 1 78 78 HOH HOH . L 4 HOH C 2 79 79 HOH HOH . L 4 HOH C 3 80 1 HOH HOH . L 4 HOH C 4 81 8 HOH HOH . L 4 HOH C 5 82 9 HOH HOH . L 4 HOH C 6 83 83 HOH HOH . L 4 HOH C 7 84 14 HOH HOH . L 4 HOH C 8 85 15 HOH HOH . L 4 HOH C 9 86 16 HOH HOH . L 4 HOH C 10 87 18 HOH HOH . L 4 HOH C 11 88 20 HOH HOH . L 4 HOH C 12 89 31 HOH HOH . L 4 HOH C 13 90 34 HOH HOH . L 4 HOH C 14 91 36 HOH HOH . L 4 HOH C 15 92 39 HOH HOH . L 4 HOH C 16 93 45 HOH HOH . L 4 HOH C 17 94 46 HOH HOH . L 4 HOH C 18 95 95 HOH HOH . L 4 HOH C 19 96 49 HOH HOH . L 4 HOH C 20 97 53 HOH HOH . L 4 HOH C 21 98 54 HOH HOH . L 4 HOH C 22 99 60 HOH HOH . L 4 HOH C 23 100 100 HOH HOH . L 4 HOH C 24 101 61 HOH HOH . L 4 HOH C 25 102 102 HOH HOH . L 4 HOH C 26 103 65 HOH HOH . L 4 HOH C 27 104 75 HOH HOH . L 4 HOH C 28 105 77 HOH HOH . L 4 HOH C 29 110 110 HOH HOH . L 4 HOH C 30 111 111 HOH HOH . L 4 HOH C 31 113 113 HOH HOH . L 4 HOH C 32 122 122 HOH HOH . L 4 HOH C 33 123 123 HOH HOH . L 4 HOH C 34 125 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . G 3 14.719 -4.243 2.614 1 87.74 ? C1 CIT 1 B 1 HETATM 2 O O1 CIT . . . G 3 13.486 -4.298 2.835 1 89.46 ? O1 CIT 1 B 1 HETATM 3 O O2 CIT . . . G 3 15.427 -3.481 3.317 1 90.43 ? O2 CIT 1 B 1 HETATM 4 C C2 CIT . . . G 3 15.334 -5.073 1.507 1 81.57 ? C2 CIT 1 B 1 HETATM 5 C C3 CIT . . . G 3 15.953 -6.363 2.051 1 76.38 ? C3 CIT 1 B 1 HETATM 6 O O7 CIT . . . G 3 16.8 -6.016 3.176 1 75.98 ? O7 CIT 1 B 1 HETATM 7 C C4 CIT . . . G 3 16.837 -6.99 0.985 1 82.96 ? C4 CIT 1 B 1 HETATM 8 C C5 CIT . . . G 3 17.674 -5.881 0.401 1 90.54 ? C5 CIT 1 B 1 HETATM 9 O O3 CIT . . . G 3 17.665 -5.666 -0.83 1 94 ? O3 CIT 1 B 1 HETATM 10 O O4 CIT . . . G 3 18.373 -5.158 1.149 1 92.83 ? O4 CIT 1 B 1 HETATM 11 C C6 CIT . . . G 3 14.877 -7.362 2.483 1 63.31 ? C6 CIT 1 B 1 HETATM 12 O O5 CIT . . . G 3 13.673 -7.131 2.284 1 60.43 ? O5 CIT 1 B 1 HETATM 13 O O6 CIT . . . G 3 15.164 -8.448 3.038 1 58.88 ? O6 CIT 1 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #